##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063980_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1079874 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.247233473534877 32.0 32.0 32.0 32.0 32.0 2 30.867378045957214 32.0 32.0 32.0 32.0 32.0 3 30.882018642915746 32.0 32.0 32.0 32.0 32.0 4 30.90285903725805 32.0 32.0 32.0 32.0 32.0 5 30.854075568075533 32.0 32.0 32.0 32.0 32.0 6 34.50690265716185 36.0 36.0 36.0 32.0 36.0 7 34.412127711195936 36.0 36.0 36.0 32.0 36.0 8 34.37776907305852 36.0 36.0 36.0 32.0 36.0 9 34.49153327147427 36.0 36.0 36.0 32.0 36.0 10 34.20580641815619 36.0 36.0 36.0 32.0 36.0 11 34.46613030779517 36.0 36.0 36.0 32.0 36.0 12 34.270582493883545 36.0 36.0 36.0 32.0 36.0 13 34.3685568871924 36.0 36.0 36.0 32.0 36.0 14 34.271412220314595 36.0 36.0 36.0 32.0 36.0 15 34.208496546819354 36.0 36.0 36.0 32.0 36.0 16 34.21427407271589 36.0 36.0 36.0 32.0 36.0 17 34.13598623543117 36.0 36.0 36.0 32.0 36.0 18 34.135742688498844 36.0 36.0 36.0 32.0 36.0 19 34.11691641802655 36.0 36.0 36.0 32.0 36.0 20 34.092411707291774 36.0 36.0 36.0 32.0 36.0 21 34.0602301750019 36.0 36.0 36.0 32.0 36.0 22 34.02963864302687 36.0 36.0 36.0 32.0 36.0 23 34.00962149287787 36.0 36.0 36.0 32.0 36.0 24 33.97214026821648 36.0 36.0 36.0 32.0 36.0 25 33.61727201506842 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 7.0 4 14.0 5 22.0 6 40.0 7 18.0 8 53.0 9 55.0 10 99.0 11 30.0 12 67.0 13 60.0 14 123.0 15 184.0 16 321.0 17 410.0 18 554.0 19 740.0 20 1135.0 21 1732.0 22 2572.0 23 4121.0 24 5974.0 25 8679.0 26 12216.0 27 15947.0 28 21484.0 29 29176.0 30 38078.0 31 51650.0 32 72257.0 33 101943.0 34 222122.0 35 487990.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.143163511554334 18.572255700740644 11.76119651864581 25.523384269059207 2 14.755074560241823 20.580886425053574 41.549252730603314 23.114786284101285 3 18.56535629948604 25.76543038384961 29.28258554428856 26.386627772375792 4 11.212979941101295 16.439776999870347 38.27221203533922 34.075031023689135 5 12.849754944635642 38.658548783243624 34.550676263896655 13.941020008224081 6 31.486009387584236 38.151416473098685 18.061838025273126 12.30073611404396 7 28.540081621159995 31.207311447895652 21.873303804479715 18.379303126464634 8 25.921849915747018 36.593307747105804 19.897414234724454 17.587428102422724 9 27.631335141785623 13.767676879975097 19.632639599175818 38.968348379063464 10 15.940880838809388 27.28975097382983 32.355241261475626 24.414126925885157 11 36.54028791709945 20.523706323446703 25.202058059668165 17.733947699785688 12 25.68943613617389 23.830893670095506 30.761347283444174 19.71832291028643 13 30.054577970514924 20.576265532482697 25.91137797792789 23.45777851907449 14 21.933232943356888 22.72359550561798 25.71972663037183 29.62344492065331 15 23.056139047154872 32.414376532920194 22.2517700103129 22.277714409612027 16 22.673428897881724 26.193854128924105 28.647495067790658 22.485221905403517 17 21.493766551949726 28.128353246637715 27.42494750634279 22.952932695069766 18 22.402128602117852 25.146475777049133 31.346279672813615 21.105115948019403 19 25.353410103998115 24.478294957268286 26.230193372367378 23.938101566366218 20 25.36570763407735 25.605743815592895 26.68127272929479 22.347275821034955 21 25.920842654666167 24.485805316820286 24.808306442794045 24.7850455857195 22 25.434077253934845 27.28243311248335 25.67540891536988 21.608080718211923 23 22.13186772447542 26.903499666345372 27.61214502854601 23.352487580633202 24 24.619147267999104 25.907809450374693 27.687933376952916 21.785109904673288 25 23.21472758799973 26.668081545195637 27.697081303307016 22.42010956349762 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 157.0 1 157.0 2 374.5 3 592.0 4 592.0 5 592.0 6 1558.0 7 2524.0 8 2524.0 9 2524.0 10 2503.5 11 2483.0 12 2483.0 13 2483.0 14 2739.0 15 2995.0 16 2995.0 17 2995.0 18 5501.5 19 8008.0 20 8008.0 21 8008.0 22 15034.5 23 22061.0 24 22061.0 25 22061.0 26 36691.5 27 51322.0 28 51322.0 29 51322.0 30 67950.5 31 84579.0 32 84579.0 33 84579.0 34 93332.5 35 102086.0 36 102086.0 37 102086.0 38 106434.0 39 110782.0 40 110782.0 41 110782.0 42 117098.5 43 123415.0 44 123415.0 45 123415.0 46 130205.5 47 136996.0 48 136996.0 49 136996.0 50 130445.5 51 123895.0 52 123895.0 53 123895.0 54 105647.5 55 87400.0 56 87400.0 57 87400.0 58 80102.5 59 72805.0 60 72805.0 61 72805.0 62 65729.0 63 58653.0 64 58653.0 65 58653.0 66 49494.5 67 40336.0 68 40336.0 69 40336.0 70 30334.5 71 20333.0 72 20333.0 73 20333.0 74 16498.0 75 12663.0 76 12663.0 77 12663.0 78 10736.5 79 8810.0 80 8810.0 81 8810.0 82 5991.0 83 3172.0 84 3172.0 85 3172.0 86 2513.5 87 1855.0 88 1855.0 89 1855.0 90 1395.5 91 936.0 92 936.0 93 936.0 94 645.5 95 355.0 96 355.0 97 355.0 98 508.0 99 661.0 100 661.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.037874789095764874 2 0.007037858120484427 3 0.0022224815117319243 4 0.00500058340139683 5 0.010927200766015294 6 0.013890509448324527 7 0.023336055873185206 8 0.03583751437667728 9 0.04611649136843743 10 0.05834013968296301 11 0.056025054774908926 12 0.06435936044390364 13 0.06334072308435984 14 0.06935994384530048 15 0.05954398383515114 16 0.06880432346736749 17 0.0644519638402258 18 0.07926850725177197 19 0.07556437139888542 20 0.08056495480028225 21 0.07482354422830811 22 0.07973152423338278 23 0.08463950423845745 24 0.07852768008119466 25 0.08010193781867143 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1079874.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.59031902981105 #Duplication Level Percentage of deduplicated Percentage of total 1 75.77336385437516 32.27211740519791 2 14.43107039868717 12.292477844434982 3 4.483054806561174 5.728042033187047 4 1.831923860956049 3.1208888670576536 5 0.9121148554585684 1.9423631342905212 6 0.506727668763346 1.2949015844317993 7 0.3355908443512612 1.0005044787082713 8 0.22296591752175068 0.7596951648020718 9 0.1636296068908845 0.6272133444184804 >10 0.9808284953332658 8.097782238977484 >50 0.16232648071626013 4.874619810073211 >100 0.16428833618983188 14.785731400972027 >500 0.02228379025797832 6.433975560425225 >1k 0.009831083937343377 6.769687133023336 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 3859 0.357356506407229 No Hit GTATCAACGCAGAGTACTTTTTTTT 3248 0.30077583125438706 No Hit GTCCTACAGTGGACATTTCTAAATT 3211 0.297349505590467 No Hit CTGTAGGACGTGGAATATGGCAAGA 3184 0.29484921388976865 No Hit CTTTAGGACGTGAAATATGGCGAGG 3048 0.2822551519899544 No Hit GTCCTACAGTGTGCATTTCTCATTT 2506 0.23206411118334175 No Hit TATCAACGCAGAGTACTTTTTTTTT 2374 0.21984046286881614 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1841 0.17048285262910304 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1769 0.16381540809390724 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1764 0.16335239111229644 No Hit CTGTAGGACCTGGAATATGGCGAGA 1751 0.1621485469601083 No Hit CTGAAGGACCTGGAATATGGCGAGA 1650 0.1527956039315698 No Hit ATTTAGAAATGTCCACTGTAGGACG 1605 0.14862845109707243 No Hit GAATAGGACCGCGGTTCTATTTTGT 1592 0.14742460694488432 No Hit GTATCTGATCGTCTTCGAACCTCCG 1566 0.14501691864050806 No Hit GATATACACTGTTCTACAAATCCCG 1558 0.14427609146993076 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1535 0.142146213354521 No Hit GAACTACGACGGTATCTGATCGTCT 1500 0.13890509448324526 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1484 0.13742344014209065 No Hit GAATAACGCCGCCGCATCGCCAGTC 1476 0.13668261297151335 No Hit GTCCTATTCCATTATTCCTAGCTGC 1407 0.13029297862528405 No Hit TCGTAGTTCCGACCATAAACGATGC 1391 0.12881132428412945 No Hit GTCCTTCAGTGTGCATTTCTCATTT 1366 0.12649623937607535 No Hit ATCAGATACCGTCGTAGTTCCGACC 1350 0.12501458503492074 No Hit GTACATGGGGAATAATTGCAATCCC 1330 0.12316251710847746 No Hit GTACATGGGGTGGTATCAACGCAAA 1281 0.11862495068869144 No Hit CTATTGGAGCTGGAATTACCGCGGC 1274 0.11797672691443632 No Hit TTTCTAAATTTTCCACCTTTTTCAG 1249 0.11566164200638224 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1232 0.11408738426890545 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1231 0.11399478087258329 No Hit CTCTTAATCATGGCCTCAGTTCCGA 1207 0.11177229936085137 No Hit TTGTAGAACAGTGTATATCAATGAG 1204 0.11149448917188486 No Hit GAATATGGCAAGAAAACTGAAAATC 1198 0.1109388687939519 No Hit GCTTTGAACACTCTAATTTTTTCAA 1198 0.1109388687939519 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 1196 0.11075366200130755 No Hit GAATAATGGAATAGGACCGCGGTTC 1177 0.10899419747118645 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1172 0.10853118048957565 No Hit GGTATCAACGCAGAGTACTTTTTTT 1169 0.10825337030060914 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 1141 0.10566047520358857 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 1119 0.10362320048450097 No Hit GTGTATATCAATGAGTTACAATGAG 1098 0.10167852916173553 No Hit CTTTAATATACGCTATTGGAGCTGG 1084 0.10038208161322523 No Hit CCATTATTCCTAGCTGCGGTATCCA 1080 0.1000116680279366 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.260339632216352E-5 0.0 10 0.0 0.0 0.0 9.260339632216352E-5 0.0 11 0.0 0.0 0.0 9.260339632216352E-5 0.0 12 0.0 0.0 0.0 9.260339632216352E-5 0.0 13 0.0 0.0 0.0 9.260339632216352E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAAGCG 25 0.00602403 19.003756 17 GCTTTAT 50 8.729777E-5 15.19596 1 TAGAAAT 520 0.0 14.611501 4 GAATACG 40 0.0052740485 14.251493 13 AAATGTC 520 0.0 13.884786 7 TCGCCAG 210 0.0 13.57411 17 ATGTCCA 515 0.0 13.282331 9 CGCCAGT 215 0.0 13.257818 18 CCGACCA 280 0.0 13.232917 9 CGCAAGG 65 5.439379E-5 13.156446 16 GGCGAAA 65 5.441745E-5 13.155837 19 AATGTCC 535 0.0 12.963376 8 CGCGGTC 110 2.739398E-9 12.955304 10 GAAATGT 560 0.0 12.891819 6 GGTTCCG 155 0.0 12.871721 8 TTTAGAA 545 0.0 12.719032 2 CGAACGA 120 7.366907E-10 12.669169 16 AATGGCG 60 4.0834132E-4 12.669169 16 TTTTCGG 165 0.0 12.669168 16 AGTGCAT 60 4.088206E-4 12.667408 10 >>END_MODULE