##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063980_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1079874 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.321564367694748 32.0 32.0 32.0 32.0 32.0 2 31.459638809712985 32.0 32.0 32.0 32.0 32.0 3 31.516581564145447 32.0 32.0 32.0 32.0 32.0 4 31.58764170634722 32.0 32.0 32.0 32.0 32.0 5 31.547661116019093 32.0 32.0 32.0 32.0 32.0 6 35.13015685163269 36.0 36.0 36.0 36.0 36.0 7 35.146918066367 36.0 36.0 36.0 36.0 36.0 8 35.099018959619364 36.0 36.0 36.0 36.0 36.0 9 35.199375112281615 36.0 36.0 36.0 36.0 36.0 10 35.066633699857576 36.0 36.0 36.0 36.0 36.0 11 35.19998629469735 36.0 36.0 36.0 36.0 36.0 12 35.09956994982748 36.0 36.0 36.0 36.0 36.0 13 35.14817747255698 36.0 36.0 36.0 36.0 36.0 14 35.09353683855709 36.0 36.0 36.0 36.0 36.0 15 35.06771993769644 36.0 36.0 36.0 36.0 36.0 16 35.07636168664122 36.0 36.0 36.0 36.0 36.0 17 35.04497654355971 36.0 36.0 36.0 36.0 36.0 18 35.04165856386949 36.0 36.0 36.0 36.0 36.0 19 35.026130826374185 36.0 36.0 36.0 36.0 36.0 20 35.011453188057125 36.0 36.0 36.0 36.0 36.0 21 34.9981544143113 36.0 36.0 36.0 36.0 36.0 22 34.981596001014935 36.0 36.0 36.0 36.0 36.0 23 34.93866228837809 36.0 36.0 36.0 36.0 36.0 24 34.90199967774018 36.0 36.0 36.0 36.0 36.0 25 34.86292289656016 36.0 36.0 36.0 32.0 36.0 26 34.80775164509934 36.0 36.0 36.0 32.0 36.0 27 34.79323976686169 36.0 36.0 36.0 32.0 36.0 28 34.74905035217072 36.0 36.0 36.0 32.0 36.0 29 34.71181915667939 36.0 36.0 36.0 32.0 36.0 30 34.666766678334696 36.0 36.0 36.0 32.0 36.0 31 34.648543255972456 36.0 36.0 36.0 32.0 36.0 32 34.613656778476006 36.0 36.0 36.0 32.0 36.0 33 34.61640987744867 36.0 36.0 36.0 32.0 36.0 34 34.59360536507037 36.0 36.0 36.0 32.0 36.0 35 34.55709184590054 36.0 36.0 36.0 32.0 36.0 36 34.499756453067675 36.0 36.0 36.0 32.0 36.0 37 34.457962688239554 36.0 36.0 36.0 32.0 36.0 38 34.38955007713863 36.0 36.0 36.0 32.0 36.0 39 34.321948671789485 36.0 36.0 36.0 32.0 36.0 40 34.330983059134674 36.0 36.0 36.0 32.0 36.0 41 34.31984750072694 36.0 36.0 36.0 32.0 36.0 42 34.24209583710692 36.0 36.0 36.0 32.0 36.0 43 34.247923368837476 36.0 36.0 36.0 32.0 36.0 44 34.12161696642386 36.0 36.0 36.0 32.0 36.0 45 34.111474116424695 36.0 36.0 36.0 32.0 36.0 46 33.996143068543184 36.0 36.0 36.0 32.0 36.0 47 33.98777449961755 36.0 36.0 36.0 32.0 36.0 48 33.92041201103092 36.0 36.0 36.0 32.0 36.0 49 33.88154173542469 36.0 36.0 36.0 32.0 36.0 50 33.334260293330516 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 15.0 21 24.0 22 120.0 23 355.0 24 910.0 25 2070.0 26 4381.0 27 7977.0 28 13474.0 29 20476.0 30 29183.0 31 41092.0 32 59238.0 33 93786.0 34 189172.0 35 617595.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.32394235756094 19.53563754908498 12.266244350596429 25.87417574275765 2 14.147773890464189 21.35487180816879 40.99499382330771 23.502360478059316 3 17.894114934311478 26.230311269237287 29.745459865965223 26.130113930486015 4 10.990448885703332 17.079029590489263 38.35688237701806 33.57363914678935 5 12.356997205229499 39.146696744249795 34.47004002318789 14.026266027332818 6 31.60294146245246 38.4211632685756 17.72683959472937 12.249055674242571 7 28.200379304213836 31.485305665856693 22.05131719314882 18.262997836780656 8 25.79664460543045 36.7748800090381 19.861039214796556 17.567436170734894 9 27.58625479579165 13.599999259158421 19.547660653811214 39.26608529123872 10 15.817254934644609 27.449449699730984 32.33061540099919 24.402679964625207 11 36.46342073241878 20.628980788499398 25.234703307978524 17.672895171103296 12 25.55439389631929 23.938463134090767 30.792232049509526 19.714910920080417 13 30.089825627158824 20.519877392649118 25.96321779473455 23.427079185457508 14 21.885452666437008 22.777969159193532 25.708975541455064 29.627602632914396 15 22.907095303229127 32.52965521328879 22.304961813327505 22.258287670154573 16 22.697302623293304 26.319795826141068 28.45562033737582 22.52728121318981 17 21.64687732087262 28.21403237785149 27.200580808501734 22.938509492774156 18 22.47770564975414 25.080611555094595 31.43498754479706 21.00669525035421 19 25.544554272072485 24.482208109464622 26.343258565351142 23.629979053111754 20 25.472673949662322 25.63667562764674 26.701806796577728 22.188843626113215 21 25.954972524572312 24.391271574276256 25.031994473429307 24.62176142772212 22 25.39585673500495 27.187641509696046 25.84100167334492 21.575500081954083 23 22.09024082617658 26.820272144877233 27.822526128241837 23.266960900704348 24 24.756823030877733 25.661282077875896 27.723193119184497 21.858701772061874 25 23.28062563955346 26.464108607174115 27.754096614823286 22.501169138449143 26 21.20456934353888 28.448284643986643 28.888271493464096 21.458874519010376 27 22.96315504331841 26.93113044605689 27.170342518718833 22.93537199190587 28 21.415652692514634 27.47338231031452 27.243160246965488 23.86780475020536 29 22.664704651236015 25.817851130072732 26.76178552047429 24.755658698216962 30 21.36280710852634 26.62039395089968 28.19304890584629 23.823750034727688 31 24.303932282501993 25.481857415399432 26.56605975291263 23.648150549185946 32 22.721834201056083 27.29316804928147 26.37071486648923 23.614282883173214 33 21.51685268394596 27.125523694514314 28.53889693543787 22.81872668610186 34 23.32602670207929 26.885069190741973 28.23573100113813 21.553173106040614 35 23.345344294145374 27.11300767608745 27.922566808075587 21.61908122169159 36 21.276934660382725 27.525748085968647 28.024827072696613 23.172490180952018 37 22.973680043192104 27.2489945148621 25.899148659924226 23.878176782021566 38 22.54547037375587 28.019141131112303 26.549474933990513 22.88591356114132 39 24.73217758515308 25.570002407808705 26.22872330573614 23.46909670130207 40 25.47947006865845 26.055389789949974 27.461989668820692 21.003150472570887 41 23.751979478251208 25.90463313669744 28.63459989072354 21.70878749432781 42 24.26402360310337 28.473465955708992 26.982343974855954 20.280166466331686 43 22.118875109273826 27.40819146256538 27.977063608481128 22.495869819679662 44 21.46144599958143 28.16785848562131 26.61701217377776 23.753683341019503 45 22.006576784561688 28.417876778357176 26.71469145508812 22.860854981993022 46 22.400557106159468 26.20658489108834 26.942416929507925 24.45044107324427 47 24.238868721292043 25.935879389539192 26.952141057934508 22.873110831234257 48 23.328845063953207 27.34967384419346 25.495901290176803 23.825579801676525 49 23.425504921888745 27.202070619611618 25.952290553492553 23.420133905007084 50 22.552914462669097 29.17351943222059 25.131776829503195 23.14178927560712 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 23.0 1 20.5 2 18.0 3 52.5 4 87.0 5 129.5 6 172.0 7 168.5 8 165.0 9 238.0 10 311.0 11 464.5 12 618.0 13 1197.0 14 1776.0 15 2507.0 16 3238.0 17 3752.0 18 4266.0 19 4450.0 20 4634.0 21 4958.0 22 5282.0 23 5803.5 24 6325.0 25 7617.5 26 8910.0 27 12570.5 28 16231.0 29 21219.5 30 26208.0 31 31603.0 32 36998.0 33 45964.5 34 54931.0 35 64723.0 36 74515.0 37 77450.5 38 80386.0 39 74848.0 40 69310.0 41 66373.0 42 63436.0 43 58434.5 44 53433.0 45 56118.5 46 58804.0 47 61374.5 48 63945.0 49 66092.0 50 68239.0 51 62191.5 52 56144.0 53 54008.5 54 51873.0 55 53506.5 56 55140.0 57 54954.5 58 54769.0 59 48682.0 60 42595.0 61 37007.5 62 31420.0 63 27470.0 64 23520.0 65 20011.0 66 16502.0 67 14907.0 68 13312.0 69 12626.5 70 11941.0 71 9126.0 72 6311.0 73 5653.5 74 4996.0 75 3955.0 76 2914.0 77 2579.0 78 2244.0 79 1901.5 80 1559.0 81 1226.0 82 893.0 83 819.0 84 745.0 85 538.5 86 332.0 87 259.5 88 187.0 89 135.5 90 84.0 91 75.5 92 67.0 93 48.5 94 30.0 95 24.5 96 19.0 97 11.5 98 4.0 99 8.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01055678718072664 2 7.408271705773081E-4 3 4.6301698161081755E-4 4 0.0 5 0.0 6 2.7781018896649054E-4 7 1.8520679264432703E-4 8 9.260339632216352E-5 9 0.0019446713227654338 10 8.334305668994715E-4 11 0.0 12 9.260339632216352E-5 13 3.7041358528865407E-4 14 5.556203779329811E-4 15 0.004352359627141685 16 9.260339632216351E-4 17 0.0 18 3.7041358528865407E-4 19 0.0 20 6.482237742551446E-4 21 0.0 22 9.260339632216352E-5 23 7.408271705773081E-4 24 1.8520679264432703E-4 25 0.0017594645301211068 26 0.006389634346229283 27 0.007315668309450917 28 0.004352359627141685 29 0.0029633086823092326 30 0.004074549438175194 31 0.00870471925428337 32 0.003333722267597886 33 0.0042597562308195214 34 0.0030559120786313957 35 0.002500291700698415 36 0.007871288687383899 37 0.004352359627141685 38 0.009723356613827169 39 0.00500058340139683 40 0.003333722267597886 41 0.004074549438175194 42 0.0014816543411546163 43 0.001666861133798943 44 0.0011112407558659622 45 0.0013890509448324527 46 7.408271705773081E-4 47 0.0031485154749535593 48 0.002037274719087597 49 3.7041358528865407E-4 50 0.001666861133798943 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1079874.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.0467733925833 #Duplication Level Percentage of deduplicated Percentage of total 1 77.41705139542505 38.74473627908812 2 13.837307522068507 13.850251878409017 3 4.1620328863600715 6.248889501484257 4 1.7228181489240795 3.44885957983333 5 0.7741864954844875 1.9372768051555178 6 0.446120419850837 1.3396132534847378 7 0.2856356866515153 1.000660113787832 8 0.1838851470989884 0.7362286629699935 9 0.1384037490739659 0.6233994959929858 >10 0.784733460098286 7.588383400569938 >50 0.11058592509234236 3.92957519709769 >100 0.11840607239956115 12.49503408468894 >500 0.013984968915139779 4.820089020441804 >1k 0.004848122557248456 3.2370027269958928 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1824 0.16890859489162624 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1686 0.1561293261991677 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1673 0.15492548204697956 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1659 0.15362903449846926 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1622 0.15020270883454923 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1608 0.14890626128603893 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1553 0.14381307448831993 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1466 0.13575657900829172 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1416 0.13112640919218352 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1410 0.13057078881425055 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1339 0.12399594767537694 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1320 0.12223648314525584 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1290 0.11945838125559093 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1275 0.11806933031075849 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1272 0.11779152012179198 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1245 0.11529122842109357 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 1225 0.1134391604946503 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1148 0.10630869897784372 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1138 0.10538266501462208 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 1133 0.10491964803301125 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1124 0.10408621746611178 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1093 0.10121551218012471 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 1.8520679264432703E-4 0.0 21 0.0 0.0 0.0 5.556203779329811E-4 0.0 22 0.0 0.0 0.0 5.556203779329811E-4 0.0 23 0.0 0.0 0.0 0.001296447548510289 0.0 24 0.0 0.0 0.0 0.0019446713227654338 0.0 25 0.0 0.0 0.0 0.0025002917006984146 0.0 26 0.0 0.0 0.0 0.0027781018896649054 0.0 27 0.0 0.0 0.0 0.0036115324565643768 0.0 28 0.0 0.0 0.0 0.00527839359036332 0.0 29 0.0 0.0 0.0 0.007778685291061735 0.0 30 0.0 0.0 0.0 0.014631336618901834 0.0 31 0.0 0.0 0.0 0.033244619279656704 0.0 32 0.0 0.0 0.0 0.05028364420293479 0.0 33 0.0 0.0 0.0 0.06880432346736749 0.0 34 0.0 0.0 0.0 0.08834364009134399 0.0 35 0.0 0.0 0.0 0.11251312653142867 0.0 36 0.0 0.0 0.0 0.14640596958534052 0.0 37 0.0 0.0 0.0 0.19604139001402016 0.0 38 0.0 0.0 0.0 0.26799422895634123 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGG 60 9.749252E-6 25.667505 35 AGGACCT 1715 0.0 23.217268 5 GGACCTG 1695 0.0 22.45293 6 TAGGACC 1665 0.0 21.536245 4 CGGACCG 95 6.862756E-7 20.842785 21 TGTAGGA 2640 0.0 20.832083 2 GTCCTAC 2295 0.0 20.131376 1 CTGTAGG 2595 0.0 20.093142 1 GTAGGAC 2790 0.0 20.027472 3 TTAGGAC 1620 0.0 19.961765 3 TCCTACA 2350 0.0 19.564783 2 GTATCAA 2945 0.0 19.498089 1 GTCCTAA 1290 0.0 19.442495 1 AAATTTA 1145 0.0 19.406746 44 CCTACAG 2265 0.0 18.939262 3 GATATAC 790 0.0 18.937326 1 TAGGACG 2605 0.0 18.916332 4 CTTTAGG 1705 0.0 18.839325 1 GACCTGG 2025 0.0 18.793936 7 AGGACGT 2600 0.0 18.783487 5 >>END_MODULE