##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063979_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2539119 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22099161165743 32.0 32.0 32.0 32.0 32.0 2 30.727670503036684 32.0 32.0 32.0 32.0 32.0 3 30.751668984399707 32.0 32.0 32.0 32.0 32.0 4 30.794535427445503 32.0 32.0 32.0 32.0 32.0 5 30.65174968168093 32.0 32.0 32.0 32.0 32.0 6 34.315625616601665 36.0 36.0 36.0 32.0 36.0 7 34.2536572724634 36.0 36.0 36.0 32.0 36.0 8 34.2116426996923 36.0 36.0 36.0 32.0 36.0 9 34.39497361092568 36.0 36.0 36.0 32.0 36.0 10 34.01400997747644 36.0 36.0 36.0 32.0 36.0 11 34.359727921377456 36.0 36.0 36.0 32.0 36.0 12 34.13868550469671 36.0 36.0 36.0 32.0 36.0 13 34.24397084185499 36.0 36.0 36.0 32.0 36.0 14 34.126092554149686 36.0 36.0 36.0 32.0 36.0 15 34.03996110461936 36.0 36.0 36.0 32.0 36.0 16 34.04538779001693 36.0 36.0 36.0 32.0 36.0 17 33.965681009830575 36.0 36.0 36.0 32.0 36.0 18 33.95764003183781 36.0 36.0 36.0 32.0 36.0 19 33.978998227337904 36.0 36.0 36.0 32.0 36.0 20 33.962258562910996 36.0 36.0 36.0 32.0 36.0 21 33.94679965767654 36.0 36.0 36.0 32.0 36.0 22 33.92173190779952 36.0 36.0 36.0 32.0 36.0 23 33.85875100773142 36.0 36.0 36.0 32.0 36.0 24 33.83489942771489 36.0 36.0 36.0 32.0 36.0 25 33.413225217093014 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 18.0 5 27.0 6 103.0 7 41.0 8 146.0 9 155.0 10 215.0 11 78.0 12 155.0 13 143.0 14 245.0 15 439.0 16 775.0 17 1000.0 18 1311.0 19 1737.0 20 2713.0 21 4057.0 22 6443.0 23 10130.0 24 15005.0 25 22236.0 26 31450.0 27 41241.0 28 56300.0 29 75133.0 30 99209.0 31 134556.0 32 187589.0 33 263086.0 34 543449.0 35 1039928.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.38398560837022 17.154792757852004 11.326592444394363 26.134629189383414 2 16.81602472176786 19.378907331574883 37.29285456307797 26.51221338357929 3 19.020278918825248 23.06641355761316 28.4247899838131 29.488517539748493 4 12.69489180346722 15.391110881802824 35.73276009762756 36.18123721710239 5 14.793414470833827 36.23939501358856 33.72555043522785 15.241640080349757 6 34.683619591184005 35.474703550306344 16.549938061166813 13.291738797342834 7 30.648912426051357 30.182471659419853 20.446500532186025 18.722115382342768 8 28.285101378703086 33.09115908370121 19.050725793901716 19.573013743693995 9 27.32841452002167 14.095729695118948 18.26776338472147 40.308092400137916 10 15.877884735119016 26.65466877463876 31.52402126676933 25.94342522347289 11 37.464411770153134 20.88188273902385 22.427924106289655 19.22578138453336 12 24.70612436469307 23.377442756860646 28.886411436529603 23.03002144191668 13 29.633843469186527 19.414390733534738 25.104216995192896 25.84754880208584 14 23.68135954186951 19.469639318006355 24.844301921264833 32.0046992188593 15 25.30260828718744 27.413457734146068 21.848286809131764 25.435647169534725 16 25.98517702288789 25.64479083412548 23.61051338923281 24.759518753753827 17 24.35150545944069 25.756650854708766 25.046472338663055 24.845371347187484 18 25.014268011590985 24.975484245277364 25.888321671927173 24.121926071204474 19 25.814526265257403 24.662868007430205 24.95976881701995 24.562836910292443 20 26.016661358827776 24.285294238209502 24.581416467754092 25.11662793520863 21 26.834654470583413 24.200577958133508 24.1545825174759 24.810185053807178 22 26.201247717877653 24.22687685841224 24.6395902112323 24.932285212477808 23 24.829601891998422 24.242885297595585 25.102286164761527 25.825226645644463 24 24.966399518202593 24.796406699443395 24.994462325287348 25.242731457066665 25 25.200207795156228 24.36898775537875 24.977237916782613 25.45356653268241 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 63.0 1 63.0 2 250.5 3 438.0 4 438.0 5 438.0 6 1268.5 7 2099.0 8 2099.0 9 2099.0 10 2647.0 11 3195.0 12 3195.0 13 3195.0 14 4544.5 15 5894.0 16 5894.0 17 5894.0 18 10240.5 19 14587.0 20 14587.0 21 14587.0 22 23878.0 23 33169.0 24 33169.0 25 33169.0 26 50659.0 27 68149.0 28 68149.0 29 68149.0 30 87472.5 31 106796.0 32 106796.0 33 106796.0 34 132200.5 35 157605.0 36 157605.0 37 157605.0 38 181789.5 39 205974.0 40 205974.0 41 205974.0 42 236498.5 43 267023.0 44 267023.0 45 267023.0 46 295865.0 47 324707.0 48 324707.0 49 324707.0 50 334059.0 51 343411.0 52 343411.0 53 343411.0 54 321629.5 55 299848.0 56 299848.0 57 299848.0 58 277686.5 59 255525.0 60 255525.0 61 255525.0 62 223451.5 63 191378.0 64 191378.0 65 191378.0 66 158543.0 67 125708.0 68 125708.0 69 125708.0 70 95289.0 71 64870.0 72 64870.0 73 64870.0 74 49845.0 75 34820.0 76 34820.0 77 34820.0 78 26964.0 79 19108.0 80 19108.0 81 19108.0 82 13305.0 83 7502.0 84 7502.0 85 7502.0 86 5574.5 87 3647.0 88 3647.0 89 3647.0 90 2602.5 91 1558.0 92 1558.0 93 1558.0 94 1104.5 95 651.0 96 651.0 97 651.0 98 1022.5 99 1394.0 100 1394.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03847791300840961 2 0.005592490938786248 3 0.0011421284311605717 4 0.003229466598454031 5 0.008625038842212595 6 0.012760331437793976 7 0.0209915328899512 8 0.03402755050078393 9 0.04899337132288798 10 0.05714580529703413 11 0.055609839475818185 12 0.06167493528267088 13 0.06399857588399756 14 0.06600714657327994 15 0.05966636459338849 16 0.0672280424824516 17 0.06254137754079268 18 0.07778288453593549 19 0.07514417402256451 20 0.07841302436002409 21 0.07526232523958112 22 0.07904316418411268 23 0.08345414295273282 24 0.07691644227781369 25 0.0789643967061016 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2539119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.30446340691956 #Duplication Level Percentage of deduplicated Percentage of total 1 69.68664668608925 30.87429488054773 2 15.511922175176737 13.744947767622035 3 6.03808028849759 8.025417215693514 4 2.8772508209058483 5.099002148294097 5 1.6271928637030537 3.60459533429663 6 0.9812353200880376 2.6083862599450476 7 0.6513335924381535 2.019988971831154 8 0.42757959801040013 1.5154947722877719 9 0.31829011209447233 1.2691505361666486 >10 1.6662297713536136 13.372306977086454 >50 0.11809072262582135 3.6353195998730268 >100 0.07982175609261237 7.367032370903005 >500 0.011062624713895321 3.311812946677226 >1k 0.0052636682106426205 3.552250218775726 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3893 0.15332089594855539 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1815121701661087E-4 2 0.0 0.0 0.0 0.0 1.1815121701661087E-4 3 0.0 0.0 0.0 0.0 1.1815121701661087E-4 4 0.0 0.0 0.0 3.938373900553696E-5 1.1815121701661087E-4 5 0.0 0.0 0.0 3.938373900553696E-5 1.1815121701661087E-4 6 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 7 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 8 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 9 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 10 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 11 0.0 0.0 0.0 3.938373900553696E-5 1.5753495602214784E-4 12 0.0 0.0 0.0 3.938373900553696E-5 4.726048680664435E-4 13 0.0 0.0 0.0 3.938373900553696E-5 5.513723460775174E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 900 0.0 14.245388 1 GTATCAA 2780 0.0 13.22054 1 TTGCGCG 240 0.0 12.272909 18 TAGGACG 525 0.0 11.940875 4 CGCATCG 255 0.0 11.922174 13 ACGGTAT 295 0.0 11.917033 9 GTATTAG 380 0.0 11.746197 1 AACCGCG 195 0.0 11.693133 7 GCGTTAT 220 0.0 11.655318 1 CGTCGTA 435 0.0 11.356675 10 CGGTCCA 335 0.0 11.3436365 10 AACGGAC 85 5.316538E-5 11.178361 15 CGCTTAC 85 5.316538E-5 11.178361 18 GAACCGC 255 0.0 11.175938 6 AGAACCG 265 0.0 11.1118 5 TCGCGTA 190 0.0 11.001643 9 CGTTATT 225 0.0 10.971415 2 CGGAATT 150 2.1282176E-9 10.768488 15 GTCGCGT 195 1.8189894E-12 10.719339 8 GTAGGAC 665 0.0 10.710608 3 >>END_MODULE