##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063978_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1569464 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275752103902988 32.0 32.0 32.0 32.0 32.0 2 30.86591664415367 32.0 32.0 32.0 32.0 32.0 3 30.882291024196796 32.0 32.0 32.0 32.0 32.0 4 30.919881564661566 32.0 32.0 32.0 32.0 32.0 5 30.816160166783053 32.0 32.0 32.0 32.0 32.0 6 34.47977334937278 36.0 36.0 36.0 32.0 36.0 7 34.434444498249086 36.0 36.0 36.0 32.0 36.0 8 34.39091562469735 36.0 36.0 36.0 32.0 36.0 9 34.53355986502398 36.0 36.0 36.0 32.0 36.0 10 34.22271552581009 36.0 36.0 36.0 32.0 36.0 11 34.50509728161971 36.0 36.0 36.0 32.0 36.0 12 34.31547139660419 36.0 36.0 36.0 32.0 36.0 13 34.39953194211527 36.0 36.0 36.0 32.0 36.0 14 34.305422105890926 36.0 36.0 36.0 32.0 36.0 15 34.231234994877234 36.0 36.0 36.0 32.0 36.0 16 34.23104257249609 36.0 36.0 36.0 32.0 36.0 17 34.17068183787586 36.0 36.0 36.0 32.0 36.0 18 34.15679493126316 36.0 36.0 36.0 32.0 36.0 19 34.178093285350926 36.0 36.0 36.0 32.0 36.0 20 34.1513236366046 36.0 36.0 36.0 32.0 36.0 21 34.13415917791042 36.0 36.0 36.0 32.0 36.0 22 34.11497747001524 36.0 36.0 36.0 32.0 36.0 23 34.0544319589363 36.0 36.0 36.0 32.0 36.0 24 34.03643218321669 36.0 36.0 36.0 32.0 36.0 25 33.63354814127626 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 10.0 5 23.0 6 66.0 7 23.0 8 88.0 9 85.0 10 168.0 11 46.0 12 90.0 13 90.0 14 103.0 15 249.0 16 375.0 17 532.0 18 690.0 19 936.0 20 1399.0 21 2071.0 22 3260.0 23 5232.0 24 7927.0 25 11728.0 26 16658.0 27 22641.0 28 30876.0 29 42051.0 30 56168.0 31 76689.0 32 107060.0 33 152147.0 34 324506.0 35 705474.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.29043822136269 17.086164815698943 11.27631677076833 26.347080192170036 2 16.48569274853302 19.441957615082146 38.0383578472759 26.03399178910894 3 18.85945741363513 23.321541486613746 28.844445747098018 28.974555352653102 4 12.540715989723514 15.171325748307643 36.15936709893157 36.12859116303727 5 14.432047653973425 36.57950963255896 34.14780862708714 14.840634086380474 6 34.459301440108284 35.71932449560524 16.6202859060052 13.201088158281276 7 30.140556042380307 30.276109296582494 20.969839878913408 18.613494782123794 8 27.677275016094182 34.04132858262848 19.323853170075658 18.95754323120168 9 27.29051296092185 13.909746875870557 18.40684857367068 40.392891589536916 10 15.543596828394248 26.905669783996995 32.346451452080046 25.204281935528705 11 37.38108626051433 20.64696979549578 22.993751012065736 18.978192931924156 12 24.51892240659297 23.184618268388444 29.806918642386343 22.489540682632242 13 29.75503266273668 19.60771562315503 25.138129648685904 25.499122065422387 14 23.162521606235092 19.633795435258442 25.27165995181116 31.932023006695303 15 24.91380387576537 28.26901351341013 21.859260600465664 24.957922010358836 16 25.430071225316453 25.629956076340072 24.43408996284756 24.505882735495916 17 23.836644757688916 26.033131882950077 25.622984088203772 24.50723927115723 18 24.489976802345524 25.029363716011737 26.71779332790057 23.762866153742166 19 25.550948992982182 24.62236034825103 25.27268484098007 24.554005817786717 20 25.75039423954333 24.67706791633003 25.100225798984706 24.47231204514194 21 26.286907589549024 24.366007237251118 24.49646905038976 24.85061612281009 22 25.819891916019706 24.748553300706213 24.972692056305696 24.458862726968388 23 24.386388245181976 24.687502789868983 25.442584815205453 25.483524149743587 24 24.86741481038899 24.884886659350595 25.499780964229256 24.747917566031155 25 24.84431770792816 24.69772193095779 25.494848424175103 24.963111936938947 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 58.0 1 58.0 2 179.5 3 301.0 4 301.0 5 301.0 6 815.0 7 1329.0 8 1329.0 9 1329.0 10 1689.0 11 2049.0 12 2049.0 13 2049.0 14 2861.0 15 3673.0 16 3673.0 17 3673.0 18 6322.0 19 8971.0 20 8971.0 21 8971.0 22 15092.5 23 21214.0 24 21214.0 25 21214.0 26 32673.5 27 44133.0 28 44133.0 29 44133.0 30 58289.5 31 72446.0 32 72446.0 33 72446.0 34 87838.0 35 103230.0 36 103230.0 37 103230.0 38 119566.0 39 135902.0 40 135902.0 41 135902.0 42 153919.5 43 171937.0 44 171937.0 45 171937.0 46 187267.0 47 202597.0 48 202597.0 49 202597.0 50 207936.5 51 213276.0 52 213276.0 53 213276.0 54 198491.5 55 183707.0 56 183707.0 57 183707.0 58 166975.5 59 150244.0 60 150244.0 61 150244.0 62 130520.5 63 110797.0 64 110797.0 65 110797.0 66 91106.0 67 71415.0 68 71415.0 69 71415.0 70 53664.0 71 35913.0 72 35913.0 73 35913.0 74 27277.0 75 18641.0 76 18641.0 77 18641.0 78 14387.5 79 10134.0 80 10134.0 81 10134.0 82 6962.5 83 3791.0 84 3791.0 85 3791.0 86 2805.0 87 1819.0 88 1819.0 89 1819.0 90 1306.0 91 793.0 92 793.0 93 793.0 94 549.0 95 305.0 96 305.0 97 305.0 98 547.0 99 789.0 100 789.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04109683305892967 2 0.00541586172094422 3 0.0011468883644352467 4 0.0035680971337985453 5 0.00962111905720679 6 0.013189216191005337 7 0.021599730863530477 8 0.03657299562143509 9 0.05014450793391884 10 0.05868245464693679 11 0.05670725801929831 12 0.064098316367881 13 0.06435318044886662 14 0.06696553727896913 15 0.06040278719358966 16 0.06760269748143315 17 0.0640346003476346 18 0.07658665633617592 19 0.07454774368829103 20 0.07996360540923525 21 0.07575834807297267 22 0.07894414908529282 23 0.08219366611785935 24 0.07817955684233599 25 0.07684152041716154 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1569464.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.03487729566739 #Duplication Level Percentage of deduplicated Percentage of total 1 74.14953200463397 37.10062735383023 2 14.249768163749838 14.259708031298612 3 4.847453177992463 7.276251748720375 4 2.182543985480777 4.368132820237101 5 1.138538539827916 2.8483318068339045 6 0.6932380831910928 2.0811649457489994 7 0.473667022218614 1.6589909934998759 8 0.36049941215873343 1.443003508201796 9 0.27984745323371796 1.2601919685648686 >10 1.4448769794458967 13.050418626561417 >50 0.0998815095189284 3.434944977514751 >100 0.06992688440291382 7.066012958951892 >500 0.008181427316138433 2.8452849954164505 >1k 0.0020453568290346082 1.306935264619736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2481 0.15807944623132483 No Hit TATCAACGCAGAGTACTTTTTTTTT 1809 0.11526228062574229 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.371602024640259E-5 2 0.0 0.0 0.0 0.0 6.371602024640259E-5 3 0.0 0.0 0.0 0.0 6.371602024640259E-5 4 0.0 0.0 0.0 0.0 6.371602024640259E-5 5 0.0 0.0 0.0 0.0 6.371602024640259E-5 6 0.0 0.0 0.0 0.0 6.371602024640259E-5 7 0.0 0.0 0.0 0.0 6.371602024640259E-5 8 0.0 0.0 0.0 0.0 6.371602024640259E-5 9 0.0 0.0 0.0 0.0 6.371602024640259E-5 10 0.0 0.0 0.0 0.0 6.371602024640259E-5 11 0.0 0.0 0.0 0.0 6.371602024640259E-5 12 0.0 0.0 0.0 0.0 6.371602024640259E-5 13 0.0 0.0 0.0 0.0 6.371602024640259E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATT 40 2.7606424E-4 16.625391 13 GGACCGT 45 6.7644444E-4 14.777183 6 TCCAACG 170 0.0 13.974035 18 CGAATTG 55 1.9587195E-4 13.819388 14 GTATCAA 1715 0.0 13.679484 1 CGACCCG 135 1.8189894E-12 13.36898 5 GTGCGAA 50 0.0014989326 13.300736 11 TGCGATG 65 5.4513504E-5 13.154156 12 GGTATCA 535 0.0 12.782494 1 CCAACGA 145 7.2759576E-12 12.451347 19 CGAACGA 85 3.932517E-6 12.297152 16 TTTAACC 55 0.0030767287 12.08657 3 GATATAC 315 0.0 12.061084 1 TAAGAGG 375 0.0 11.903531 4 TAATACC 80 2.8741366E-5 11.871873 4 CCCGACC 170 1.8189894E-12 11.731082 3 CGACCAT 235 0.0 11.723307 10 CGCATCG 130 2.6138878E-9 11.692582 13 GAACCGG 65 8.026207E-4 11.691837 6 GTTTTAC 90 7.477174E-6 11.608792 1 >>END_MODULE