##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063977_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 957034 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266573601355855 32.0 32.0 32.0 32.0 32.0 2 31.397243985062183 32.0 32.0 32.0 32.0 32.0 3 31.480336121809675 32.0 32.0 32.0 32.0 32.0 4 31.564295521371236 32.0 32.0 32.0 32.0 32.0 5 31.508729052468354 32.0 32.0 32.0 32.0 32.0 6 35.086708518192665 36.0 36.0 36.0 36.0 36.0 7 35.11372845687823 36.0 36.0 36.0 36.0 36.0 8 35.05828424068528 36.0 36.0 36.0 36.0 36.0 9 35.16973064697806 36.0 36.0 36.0 36.0 36.0 10 35.02683917185805 36.0 36.0 36.0 36.0 36.0 11 35.17199388945429 36.0 36.0 36.0 36.0 36.0 12 35.07062236033411 36.0 36.0 36.0 36.0 36.0 13 35.11789967754542 36.0 36.0 36.0 36.0 36.0 14 35.06013788433849 36.0 36.0 36.0 36.0 36.0 15 35.030204778513614 36.0 36.0 36.0 36.0 36.0 16 35.04665351492214 36.0 36.0 36.0 36.0 36.0 17 35.006224439257124 36.0 36.0 36.0 36.0 36.0 18 34.99628226374403 36.0 36.0 36.0 36.0 36.0 19 34.99845877993885 36.0 36.0 36.0 36.0 36.0 20 34.99359374902041 36.0 36.0 36.0 36.0 36.0 21 34.98039986040203 36.0 36.0 36.0 36.0 36.0 22 34.96912753360905 36.0 36.0 36.0 36.0 36.0 23 34.90970749210582 36.0 36.0 36.0 32.0 36.0 24 34.88819101515725 36.0 36.0 36.0 32.0 36.0 25 34.85238977925549 36.0 36.0 36.0 32.0 36.0 26 34.79719111337737 36.0 36.0 36.0 32.0 36.0 27 34.786359732256116 36.0 36.0 36.0 32.0 36.0 28 34.75707028172458 36.0 36.0 36.0 32.0 36.0 29 34.73301784471607 36.0 36.0 36.0 32.0 36.0 30 34.70630301535787 36.0 36.0 36.0 32.0 36.0 31 34.70702399287799 36.0 36.0 36.0 32.0 36.0 32 34.652764687565956 36.0 36.0 36.0 32.0 36.0 33 34.61990901054717 36.0 36.0 36.0 32.0 36.0 34 34.61157910795228 36.0 36.0 36.0 32.0 36.0 35 34.55209532785669 36.0 36.0 36.0 32.0 36.0 36 34.52337221039169 36.0 36.0 36.0 32.0 36.0 37 34.49826860905673 36.0 36.0 36.0 32.0 36.0 38 34.45546344226015 36.0 36.0 36.0 32.0 36.0 39 34.433115228926034 36.0 36.0 36.0 32.0 36.0 40 34.393993316851855 36.0 36.0 36.0 32.0 36.0 41 34.375058775341316 36.0 36.0 36.0 32.0 36.0 42 34.29751189612908 36.0 36.0 36.0 32.0 36.0 43 34.282814403668 36.0 36.0 36.0 32.0 36.0 44 34.2148972763768 36.0 36.0 36.0 32.0 36.0 45 34.160796795098186 36.0 36.0 36.0 32.0 36.0 46 34.1513540793744 36.0 36.0 36.0 32.0 36.0 47 34.09289743102126 36.0 36.0 36.0 32.0 36.0 48 34.055150600710114 36.0 36.0 36.0 32.0 36.0 49 34.01926681810678 36.0 36.0 36.0 32.0 36.0 50 33.412544381913285 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 6.0 20 14.0 21 37.0 22 124.0 23 340.0 24 884.0 25 1968.0 26 4172.0 27 7526.0 28 12078.0 29 18407.0 30 25371.0 31 35431.0 32 50974.0 33 80201.0 34 163047.0 35 556451.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.037373137822065 17.992797906669562 11.655749970740189 26.31407898476818 2 15.652745429334805 20.829715358082897 37.11473135031718 26.40280786226512 3 17.715733653770798 25.219299391342965 29.049815835531987 28.015151119354247 4 11.779205336487523 16.158673568546153 36.40142356488902 35.6606975300773 5 13.673390914011415 37.64035551506007 33.688771767774185 14.997481803154328 6 33.67933360639979 36.377675981576374 16.976025880012372 12.966964532011469 7 29.651015168755933 30.920772846913323 21.389544561159333 18.038667423171407 8 28.265975921440617 33.045847900910516 19.608289778628553 19.079886399020307 9 27.646984450739424 13.765395398020738 18.450967218133734 40.1366529331061 10 15.250039967524428 27.303409412691597 32.340257902859584 25.106292716924393 11 37.02522585404489 21.00458290928013 22.819356470094064 19.150834766580914 12 24.34046092502654 24.10285131531652 29.475816900584306 22.080870859072633 13 29.688577554679696 19.579573429408544 25.551812486155058 25.180036529756705 14 23.511623946091724 19.67100403016406 25.77925735058248 31.038114673161743 15 25.074999921630177 27.354098898538247 22.914396118708343 24.656505061123237 16 25.370498661993835 25.894834073651467 24.268537472009495 24.466129792345203 17 23.586204878823533 25.957071535598526 25.8833019516548 24.573421633923143 18 24.467571549481207 24.873932896565414 27.08608925530025 23.572406298653124 19 25.30780025349178 25.124525486581966 25.975279849284195 23.592394410642058 20 25.33745164708169 24.322850162900487 25.97306656245494 24.36663162756289 21 26.499894465609376 24.421075949234826 24.990648190137446 24.08838139501836 22 25.414379650440477 24.54920572226872 25.481670955964947 24.554743671325856 23 24.062748490899423 24.35396284535337 26.035733579094423 25.547555084652785 24 24.42384130871824 25.31148513941076 25.74240252113836 24.522271030732643 25 24.656798513716566 24.560039623079188 25.797633900302813 24.98552796290143 26 24.321279852871257 25.327983197228797 26.30114369608719 24.049593253812755 27 25.007549799943362 24.990726024291025 25.423650884711158 24.57807329105445 28 24.16838559071426 24.73484682244612 26.249171886135127 24.8475957007045 29 24.264532241042414 25.08928851318168 26.122715541112424 24.523463704663484 30 24.43495179718244 25.16598780770702 26.349793834469875 24.04926656064067 31 24.528351177998708 25.120119712172478 25.450853847906185 24.900675261922625 32 24.24018557799814 25.2336966175902 25.36702855769532 25.159089246716338 33 24.027080714447678 24.912251003405466 25.876000923728643 25.18466735841821 34 24.618681746984617 24.97102953054778 26.096410796554682 24.313877925912923 35 25.316244067484906 24.858988478747438 25.912055623010737 23.912711830756916 36 24.353261800960546 25.430322815260055 25.56000484870778 24.656410535071625 37 25.048589544783884 25.42581160213836 25.340022319842507 24.18557653323525 38 24.389525163016216 25.272320682160178 25.687489550242432 24.650664604581173 39 24.68560310389544 25.337228876760598 25.259067222157782 24.718100797186178 40 25.113975371079565 25.37468456277658 25.573116127919914 23.93822393822394 41 24.055799373040752 25.80135841170324 25.939602925809822 24.203239289446184 42 25.418801775518908 25.71984167453836 25.32590886672741 23.535447683215327 43 24.518818833462205 24.881820651606027 25.598838059810664 25.000522455121104 44 24.447163535938156 25.505763208462945 25.318933061935027 24.728140193663865 45 24.47357201969455 25.560283213655783 25.34273199194162 24.62341277470805 46 24.222460228311697 25.521799326036415 25.351688827355606 24.904051618296283 47 24.622681334481346 25.174082773955714 25.733216581540958 24.470019310021986 48 25.254513746302326 25.974142678164846 24.57856201692544 24.192781558607386 49 24.29479597253163 25.90039162908504 25.209920712873608 24.594891685509722 50 24.34086786427813 26.2990378426275 24.799376394961005 24.560717898133362 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 64.0 1 54.5 2 45.0 3 140.0 4 235.0 5 271.0 6 307.0 7 277.5 8 248.0 9 375.0 10 502.0 11 678.5 12 855.0 13 1559.5 14 2264.0 15 2953.0 16 3642.0 17 3917.0 18 4192.0 19 4262.5 20 4333.0 21 4556.0 22 4779.0 23 5250.0 24 5721.0 25 6133.0 26 6545.0 27 8021.5 28 9498.0 29 11009.0 30 12520.0 31 14124.0 32 15728.0 33 18254.0 34 20780.0 35 24136.5 36 27493.0 37 32151.5 38 36810.0 39 39866.0 40 42922.0 41 47349.5 42 51777.0 43 52973.0 44 54169.0 45 59985.0 46 65801.0 47 69709.5 48 73618.0 49 74438.0 50 75258.0 51 71697.5 52 68137.0 53 66848.0 54 65559.0 55 65581.0 56 65603.0 57 63969.5 58 62336.0 59 55823.0 60 49310.0 61 43583.5 62 37857.0 63 32513.0 64 27169.0 65 23114.0 66 19059.0 67 16378.0 68 13697.0 69 12235.5 70 10774.0 71 8425.0 72 6076.0 73 5192.5 74 4309.0 75 3335.0 76 2361.0 77 2115.0 78 1869.0 79 1532.5 80 1196.0 81 937.0 82 678.0 83 604.5 84 531.0 85 358.5 86 186.0 87 136.5 88 87.0 89 66.0 90 45.0 91 38.5 92 32.0 93 25.5 94 19.0 95 18.5 96 18.0 97 14.5 98 11.0 99 10.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009404054610390018 2 7.314264696970014E-4 3 9.404054610390017E-4 4 0.0 5 0.0 6 2.089789913420004E-4 7 1.044894956710002E-4 8 0.0 9 0.0011493844523810023 10 7.314264696970014E-4 11 0.0 12 2.089789913420004E-4 13 6.269369740260012E-4 14 1.044894956710002E-4 15 0.0034481533571430064 16 0.0013583634437230024 17 0.0 18 4.179579826840008E-4 19 1.044894956710002E-4 20 8.359159653680016E-4 21 0.0 22 1.044894956710002E-4 23 7.314264696970014E-4 24 6.269369740260012E-4 25 0.0016718319307360032 26 0.005119985287879009 27 0.0057469222619050105 28 0.004179579826840008 29 0.0025077478961040046 30 0.003761621844156007 31 0.007523243688312014 32 0.0025077478961040046 33 0.004493048313853008 34 0.002612237391775005 35 0.002089789913420004 36 0.008150180662338016 37 0.003970600835498007 38 0.007732222679654014 39 0.004493048313853008 40 0.0030301953744590058 41 0.003552642852814007 42 0.0018808109220780035 43 0.0014628529393940029 44 0.0015673424350650027 45 0.0018808109220780035 46 9.404054610390017E-4 47 0.0018808109220780035 48 0.0013583634437230024 49 6.269369740260012E-4 50 0.0018808109220780035 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 957034.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.835932038029924 #Duplication Level Percentage of deduplicated Percentage of total 1 77.23688394344593 44.67067170582343 2 13.776514351423272 15.935550954997204 3 4.292595058410611 7.447987081950576 4 1.7623859409181293 4.077169340148814 5 0.8741580137954915 2.5278871738187636 6 0.5006447965245693 1.7373155056192988 7 0.32288243831449187 1.3071944731041238 8 0.220478725063877 1.02012740469007 9 0.13986797331096093 0.7280455138838747 >10 0.7250866135892216 7.463077943614481 >50 0.07307448953294635 3.0088138154421435 >100 0.06979330085316587 7.827984123312937 >500 0.0056343548174728995 2.2481749635943147 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 966 0.10093685281818618 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.044894956710002E-4 7 0.0 0.0 0.0 0.0 1.044894956710002E-4 8 0.0 0.0 0.0 0.0 1.044894956710002E-4 9 0.0 0.0 0.0 0.0 1.044894956710002E-4 10 0.0 0.0 0.0 0.0 1.044894956710002E-4 11 0.0 0.0 0.0 0.0 1.044894956710002E-4 12 0.0 0.0 0.0 0.0 3.134684870130006E-4 13 0.0 0.0 0.0 0.0 3.134684870130006E-4 14 0.0 0.0 0.0 0.0 3.134684870130006E-4 15 0.0 0.0 0.0 0.0 5.22447478355001E-4 16 0.0 0.0 0.0 1.044894956710002E-4 5.22447478355001E-4 17 0.0 0.0 0.0 1.044894956710002E-4 7.314264696970013E-4 18 0.0 0.0 0.0 3.134684870130006E-4 7.314264696970013E-4 19 0.0 0.0 0.0 3.134684870130006E-4 7.314264696970013E-4 20 0.0 0.0 0.0 7.314264696970013E-4 0.001149384452381002 21 0.0 0.0 0.0 0.001044894956710002 0.001149384452381002 22 0.0 0.0 0.0 0.0012538739480520023 0.001149384452381002 23 0.0 0.0 0.0 0.0028212163831170052 0.001149384452381002 24 0.0 0.0 0.0 0.003866111339827007 0.001149384452381002 25 0.0 0.0 0.0 0.004597537809524008 0.001149384452381002 26 0.0 0.0 0.0 0.0058514117575760105 0.0012538739480520023 27 0.0 0.0 0.0 0.006896306714286013 0.0012538739480520023 28 0.0 0.0 0.0 0.009822012593074018 0.0012538739480520023 29 0.0 0.0 0.0 0.013897102924243026 0.0012538739480520023 30 0.0 0.0 0.0 0.026122373917750047 0.0012538739480520023 31 0.0 0.0 0.0 0.04712476254762109 0.0012538739480520023 32 0.0 0.0 0.0 0.07053040957792513 0.0012538739480520023 33 0.0 0.0 0.0 0.09195075619048017 0.0012538739480520023 34 0.0 0.0 0.0 0.11546089271645521 0.0012538739480520023 35 0.0 0.0 0.0 0.14367305654762527 0.0012538739480520023 36 0.0 0.0 0.0 0.18473742834632834 0.0012538739480520023 37 0.0 0.0 0.0 0.24502786734849547 0.0012538739480520023 38 0.0 0.0 0.0 0.3191109197792346 0.0012538739480520023 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCCGT 45 0.0013984747 24.443024 2 TCTATAG 80 3.6160654E-6 21.99872 3 TAATACC 130 6.91216E-11 21.998718 4 TAGAGCG 75 5.473561E-5 20.532137 5 ACGACGG 285 0.0 20.069008 6 TGTGCGA 55 0.0044803848 20.00197 10 TACGACG 275 0.0 19.998837 5 CGACGGT 280 0.0 19.641714 7 TTAGGAC 170 5.456968E-12 19.410635 3 GACGGTA 275 0.0 19.198883 8 TATGGCG 150 4.656613E-10 19.065556 16 GGCGTTA 185 1.8189894E-12 19.025919 42 GGACCGT 105 1.7928905E-6 18.856047 6 ACGGTAT 285 0.0 18.528141 9 GTAATAC 95 1.5973435E-5 18.525238 3 TAGCGTA 170 1.2732926E-10 18.116592 7 GTACTAA 85 1.431076E-4 18.116592 1 TTAACGG 110 2.7925598E-6 18.001774 35 CTACGAC 295 0.0 17.897264 4 CCCGTCG 100 2.4833791E-5 17.598976 41 >>END_MODULE