##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063975_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2442538 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.244317181554596 32.0 32.0 32.0 32.0 32.0 2 30.784391071909628 32.0 32.0 32.0 32.0 32.0 3 30.798484609041907 32.0 32.0 32.0 32.0 32.0 4 30.837334362863547 32.0 32.0 32.0 32.0 32.0 5 30.71322206655536 32.0 32.0 32.0 32.0 32.0 6 34.37313646706827 36.0 36.0 36.0 32.0 36.0 7 34.32763830081661 36.0 36.0 36.0 32.0 36.0 8 34.278030474858525 36.0 36.0 36.0 32.0 36.0 9 34.45613824636505 36.0 36.0 36.0 32.0 36.0 10 34.09692295472988 36.0 36.0 36.0 32.0 36.0 11 34.416250637656404 36.0 36.0 36.0 32.0 36.0 12 34.21280242108823 36.0 36.0 36.0 32.0 36.0 13 34.30693360758359 36.0 36.0 36.0 32.0 36.0 14 34.19650011586309 36.0 36.0 36.0 32.0 36.0 15 34.114312653477654 36.0 36.0 36.0 32.0 36.0 16 34.120198334683025 36.0 36.0 36.0 32.0 36.0 17 34.04408406337998 36.0 36.0 36.0 32.0 36.0 18 34.0341272070281 36.0 36.0 36.0 32.0 36.0 19 34.058952614043264 36.0 36.0 36.0 32.0 36.0 20 34.04189249051601 36.0 36.0 36.0 32.0 36.0 21 34.032144433372174 36.0 36.0 36.0 32.0 36.0 22 34.00879822545238 36.0 36.0 36.0 32.0 36.0 23 33.93486938586012 36.0 36.0 36.0 32.0 36.0 24 33.92651741753864 36.0 36.0 36.0 32.0 36.0 25 33.502467515346744 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 26.0 5 39.0 6 100.0 7 36.0 8 138.0 9 162.0 10 226.0 11 74.0 12 165.0 13 118.0 14 200.0 15 387.0 16 635.0 17 837.0 18 1102.0 19 1644.0 20 2463.0 21 3799.0 22 5841.0 23 9244.0 24 14013.0 25 20296.0 26 29174.0 27 38120.0 28 51535.0 29 70140.0 30 91170.0 31 123245.0 32 174003.0 33 244265.0 34 516048.0 35 1043289.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.70465356502449 16.71352260840147 11.26909973516563 26.312724091408406 2 17.257201674733807 19.030649135405977 36.68340144889204 27.02874774096817 3 19.426798531991096 22.41571313232551 27.891514076607006 30.265974259076383 4 13.207398848853233 15.157502720646699 34.552008365425635 37.08309006507443 5 15.31219649610123 35.66134983794018 33.30312966259783 15.723324003360755 6 35.58468678919255 34.25015508526106 16.343222620541685 13.821935505004697 7 31.289578862880635 29.70924994676408 19.97796851709283 19.023202673262464 8 28.644184626373526 32.66478895390484 18.722464524621532 19.968561895100105 9 27.330966859813067 14.292028184683241 17.971749778603925 40.40525517689977 10 16.349939945500335 26.32799916103946 31.030684326349096 26.291376567111108 11 37.51071720147191 20.850297541874404 21.855676522190805 19.783308734462874 12 24.97641280439568 23.12643105553878 28.224133050218708 23.673023089846833 13 29.889514916858634 19.225895681335604 24.616882763073427 26.267706638732335 14 23.981455913959113 19.021494653990395 24.578083531963394 32.4189659000871 15 25.515186869944813 26.74272937613885 21.67336595309571 26.06871780082063 16 26.34452345895083 25.399381048481256 22.979169175984943 25.27692631658297 17 24.70958433156465 25.505288031384065 24.46476502918495 25.320362607866336 18 25.41217385318789 24.79045601245894 25.12958600901315 24.66778412534002 19 26.027061631277594 24.579827715125628 24.601747431603314 24.791363221993464 20 26.22201207405046 24.087910953263247 24.27356156626674 25.416515406419553 21 26.978950197649187 23.92985092727952 23.948698072019038 25.142500803052254 22 26.5599628951456 23.721662785871477 24.31912633145829 25.399247987524642 23 25.208897841344584 23.888538102318865 24.75699095325761 26.145573103078938 24 25.284183096514084 24.4653948899487 24.528574003966106 25.7218480095711 25 25.383511966196124 24.11029444000349 24.717997170445617 25.788196423354766 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 71.0 2 225.0 3 379.0 4 379.0 5 379.0 6 1019.5 7 1660.0 8 1660.0 9 1660.0 10 2103.0 11 2546.0 12 2546.0 13 2546.0 14 3726.0 15 4906.0 16 4906.0 17 4906.0 18 8579.0 19 12252.0 20 12252.0 21 12252.0 22 19475.5 23 26699.0 24 26699.0 25 26699.0 26 40321.5 27 53944.0 28 53944.0 29 53944.0 30 69774.0 31 85604.0 32 85604.0 33 85604.0 34 109583.0 35 133562.0 36 133562.0 37 133562.0 38 159534.0 39 185506.0 40 185506.0 41 185506.0 42 217740.5 43 249975.0 44 249975.0 45 249975.0 46 281482.0 47 312989.0 48 312989.0 49 312989.0 50 326966.0 51 340943.0 52 340943.0 53 340943.0 54 325296.5 55 309650.0 56 309650.0 57 309650.0 58 287368.0 59 265086.0 60 265086.0 61 265086.0 62 231680.5 63 198275.0 64 198275.0 65 198275.0 66 162787.0 67 127299.0 68 127299.0 69 127299.0 70 96647.0 71 65995.0 72 65995.0 73 65995.0 74 50000.0 75 34005.0 76 34005.0 77 34005.0 78 26051.0 79 18097.0 80 18097.0 81 18097.0 82 12403.0 83 6709.0 84 6709.0 85 6709.0 86 4978.5 87 3248.0 88 3248.0 89 3248.0 90 2315.5 91 1383.0 92 1383.0 93 1383.0 94 960.5 95 538.0 96 538.0 97 538.0 98 877.5 99 1217.0 100 1217.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04143231343790762 2 0.004912922542044382 3 0.0018832869744503464 4 0.004257866203105131 5 0.009416434872251732 6 0.01363336005417316 7 0.02366391024418044 8 0.03746103438308841 9 0.04962051767464826 10 0.05821813212322592 11 0.05604825800048965 12 0.06530092878800658 13 0.0644821083643325 14 0.06763456699547765 15 0.06067459339424812 16 0.0669795106565384 17 0.06362234691947474 18 0.07701006084654569 19 0.07422607140605386 20 0.07909805292691455 21 0.07574088918985088 22 0.0772557069736479 23 0.08151357317675303 24 0.07606841735932052 25 0.07660065063470865 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2442538.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.47971857098229 #Duplication Level Percentage of deduplicated Percentage of total 1 73.87383020755775 37.291301586380456 2 14.357357392535727 14.495107211964312 3 4.911099261925451 7.437327258484667 4 2.228762975669576 4.500293110929009 5 1.1844625857858384 2.9895668994163547 6 0.7548305499468387 2.2862180238057728 7 0.5123025622091391 1.8102622414457343 8 0.36212553068733844 1.4623995901171563 9 0.2641799768604265 1.2002157795602648 >10 1.3942402678050292 12.465348320929559 >50 0.08675427910780831 3.0200253701864845 >100 0.05996110748493373 6.301752055559881 >500 0.007000193616822663 2.4510166115901884 >1k 0.0030931088074321557 2.289165939630112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3552 0.14542250724451372 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.188204236740636E-5 2 0.0 0.0 0.0 0.0 8.188204236740636E-5 3 0.0 0.0 0.0 0.0 8.188204236740636E-5 4 0.0 0.0 0.0 0.0 8.188204236740636E-5 5 0.0 0.0 0.0 4.094102118370318E-5 8.188204236740636E-5 6 0.0 0.0 0.0 4.094102118370318E-5 1.2282306355110954E-4 7 0.0 0.0 0.0 4.094102118370318E-5 1.2282306355110954E-4 8 0.0 0.0 0.0 4.094102118370318E-5 1.2282306355110954E-4 9 0.0 0.0 0.0 8.188204236740636E-5 1.2282306355110954E-4 10 0.0 0.0 0.0 8.188204236740636E-5 1.2282306355110954E-4 11 0.0 0.0 0.0 8.188204236740636E-5 1.2282306355110954E-4 12 0.0 0.0 0.0 8.188204236740636E-5 2.0470510591851591E-4 13 0.0 0.0 0.0 8.188204236740636E-5 2.456461271022191E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 780 0.0 14.249247 1 TAGGCCG 55 1.9624337E-4 13.816886 5 GTATCAA 2265 0.0 13.295104 1 TCTTATA 180 0.0 12.664182 2 CTAATCA 95 1.3626905E-5 10.998743 4 ACGGTAT 270 0.0 10.907725 9 CGACCAT 350 0.0 10.585588 10 TCGCGTA 180 3.45608E-11 10.555862 9 GCGTTAT 235 0.0 10.510083 1 CAAGACG 545 0.0 10.4575205 4 TCGGCGT 255 0.0 10.431677 13 CGGTCCA 375 0.0 10.386543 10 GTGTTAA 185 6.002665E-11 10.269728 1 CGGACAT 250 0.0 10.259037 5 CCGGTCC 410 0.0 10.195418 9 TCGCACG 140 9.676296E-8 10.179911 18 GTCGGCG 280 0.0 10.178868 12 CGAACGA 235 0.0 10.107298 16 CTAATAG 85 6.608967E-4 10.056644 3 GTAGAAC 265 0.0 10.035562 3 >>END_MODULE