##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063973_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1765123 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.279817893710522 32.0 32.0 32.0 32.0 32.0 2 31.447682682736556 32.0 32.0 32.0 32.0 32.0 3 31.51159324307711 32.0 32.0 32.0 32.0 32.0 4 31.588410552692363 32.0 32.0 32.0 32.0 32.0 5 31.534578610102525 32.0 32.0 32.0 32.0 32.0 6 35.13541662535699 36.0 36.0 36.0 36.0 36.0 7 35.15467533990549 36.0 36.0 36.0 36.0 36.0 8 35.109065487221 36.0 36.0 36.0 36.0 36.0 9 35.20687906735111 36.0 36.0 36.0 36.0 36.0 10 35.06615516312461 36.0 36.0 36.0 36.0 36.0 11 35.19485667571042 36.0 36.0 36.0 36.0 36.0 12 35.10352649645379 36.0 36.0 36.0 36.0 36.0 13 35.140143774683125 36.0 36.0 36.0 36.0 36.0 14 35.083040105420416 36.0 36.0 36.0 36.0 36.0 15 35.05971878446998 36.0 36.0 36.0 36.0 36.0 16 35.06452864757867 36.0 36.0 36.0 36.0 36.0 17 35.02725702401476 36.0 36.0 36.0 36.0 36.0 18 35.02479770531572 36.0 36.0 36.0 36.0 36.0 19 35.01968814637847 36.0 36.0 36.0 36.0 36.0 20 35.0127186603993 36.0 36.0 36.0 36.0 36.0 21 34.99890489218032 36.0 36.0 36.0 36.0 36.0 22 34.98712271042868 36.0 36.0 36.0 36.0 36.0 23 34.93959457782829 36.0 36.0 36.0 36.0 36.0 24 34.9020923754322 36.0 36.0 36.0 32.0 36.0 25 34.86603936382904 36.0 36.0 36.0 32.0 36.0 26 34.8034550566731 36.0 36.0 36.0 32.0 36.0 27 34.79823445731544 36.0 36.0 36.0 32.0 36.0 28 34.763149083661595 36.0 36.0 36.0 32.0 36.0 29 34.735334024880984 36.0 36.0 36.0 32.0 36.0 30 34.70041351225949 36.0 36.0 36.0 32.0 36.0 31 34.704471586399364 36.0 36.0 36.0 32.0 36.0 32 34.66133068347079 36.0 36.0 36.0 32.0 36.0 33 34.6339614859701 36.0 36.0 36.0 32.0 36.0 34 34.619551725290535 36.0 36.0 36.0 32.0 36.0 35 34.57144572927779 36.0 36.0 36.0 32.0 36.0 36 34.53982980222908 36.0 36.0 36.0 32.0 36.0 37 34.5150553247564 36.0 36.0 36.0 32.0 36.0 38 34.45990392737503 36.0 36.0 36.0 32.0 36.0 39 34.42489050338135 36.0 36.0 36.0 32.0 36.0 40 34.406116174340255 36.0 36.0 36.0 32.0 36.0 41 34.394756059492735 36.0 36.0 36.0 32.0 36.0 42 34.31185815379438 36.0 36.0 36.0 32.0 36.0 43 34.3091676897304 36.0 36.0 36.0 32.0 36.0 44 34.21943626591462 36.0 36.0 36.0 32.0 36.0 45 34.17524841045071 36.0 36.0 36.0 32.0 36.0 46 34.12426726069515 36.0 36.0 36.0 32.0 36.0 47 34.083736374179026 36.0 36.0 36.0 32.0 36.0 48 34.031470328130105 36.0 36.0 36.0 32.0 36.0 49 33.99775653028146 36.0 36.0 36.0 32.0 36.0 50 33.41535858974134 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 3.0 19 3.0 20 16.0 21 58.0 22 205.0 23 594.0 24 1634.0 25 3688.0 26 7535.0 27 13230.0 28 21687.0 29 32846.0 30 46526.0 31 64813.0 32 92459.0 33 146167.0 34 301601.0 35 1032056.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.013983359349105 17.651611514174583 11.73338697020604 26.60101815627027 2 15.914212906361854 20.04782693922319 37.584654588882074 26.453305565532876 3 18.836099157222527 24.025219872235027 28.031812073540774 29.106868897001668 4 12.415282107819117 15.692844068090439 34.976882630842155 36.914991193248284 5 14.44596212275292 36.77177171222629 32.70310340979071 16.07916275523009 6 34.93806079820159 34.8143863469751 16.505752023377475 13.74180083144583 7 30.795979876722264 29.809814630166787 20.350061185641767 19.04414430746918 8 28.307262440067916 33.28589565712984 18.79851998982507 19.60832191297717 9 27.905107169140454 13.755256763470996 18.198783416529423 40.140852650859124 10 16.883575264035134 26.129422255660568 30.494089306817834 26.492913173486464 11 37.876057362574734 20.27932331061348 22.70289379267054 19.141725534141248 12 26.255140582430325 22.83594155868068 28.35692283985064 22.551995019038355 13 30.45210626383762 19.117723707677005 24.86318179655048 25.5669882319349 14 23.829398374499608 19.889321847037987 24.47213160819843 31.809148170263974 15 25.062746240041335 28.351555710162796 21.667480620901667 24.918217428894206 16 25.62139433222877 24.96760812258548 24.670061747104842 24.740935798080905 17 23.95980336781063 25.934793212710954 25.16544172842346 24.939961691054958 18 25.00835638183963 23.819937250654064 27.433350064981493 23.738356302524817 19 26.296595929346527 23.67207479143085 25.145797287666234 24.88553199155639 20 26.703106260052472 23.454419065521584 25.132555252836504 24.709919421589436 21 27.254644577176773 23.26353460920287 24.150838213540926 25.330982600079427 22 26.638555295328025 24.351857831923233 24.647814711957587 24.36177216079115 23 24.268670397885227 24.162557850600557 25.93310207256557 25.63566967894864 24 25.664661879046495 24.12299983910333 25.634295465206662 24.578042816643514 25 25.09632626005966 24.276087122789423 25.67340568071407 24.95418093643685 26 24.180919509492202 25.578857672512846 26.194485299949914 24.04573751804504 27 25.12338436034182 24.582028574293787 25.285649454139996 25.00893761122439 28 24.21657715987656 24.83746854892487 25.575580878199567 25.370373412999005 29 24.426045519775602 24.30775053127934 25.532341611905192 25.73386233703987 30 23.912553284549123 24.74850599302457 26.2810387456007 25.057901976825615 31 25.638534147695722 24.239198177883036 24.726739113191083 25.395528561230158 32 24.853688853838424 24.870458688984147 24.69324232298476 25.582610134192674 33 23.956119040388703 24.636327170705837 25.949889181484014 25.457664607421442 34 25.22537222108913 24.662224941645704 25.75639631064881 24.35600652661636 35 25.43583183245112 24.60986032872295 25.90187487996247 24.052432958863456 36 23.97269315952201 25.230271861591554 25.6540729379783 25.142962040908134 37 25.308800750571937 24.95351417010471 24.621966240126365 25.115718839196987 38 24.609907057594377 25.207879594144693 25.059151348129483 25.123062000131448 39 25.819343573322094 24.247198790283058 24.67897346293939 25.25448417345546 40 26.1379802263808 24.5187325893062 25.354445891656972 23.988841292656023 41 24.862965852365146 24.688355312619155 26.1594009532761 24.2892778817396 42 25.93676791769235 25.691057371174757 25.136069934309113 23.23610477682378 43 24.70823116703001 24.706078309621688 25.54019724706192 25.04549327628639 44 24.082216537920058 25.47732558304227 24.938091150901226 25.502366728136444 45 24.3789020452099 25.78295847260779 24.925103393575434 24.913036088606876 46 24.28682551310095 24.74306002885954 25.16524550153221 25.804868956507303 47 25.385534933260818 24.490561334330454 25.413692297232988 24.710211435175744 48 25.312874982578716 25.471564493887538 24.135082676045645 25.080477847488105 49 24.916719165696 25.38807735713088 24.40224756276089 25.29295591441223 50 24.5952349387966 26.292081232883387 24.172595515943023 24.94008831237699 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 128.0 1 87.0 2 46.0 3 165.5 4 285.0 5 344.0 6 403.0 7 374.0 8 345.0 9 479.0 10 613.0 11 962.5 12 1312.0 13 2392.5 14 3473.0 15 4696.0 16 5919.0 17 6379.5 18 6840.0 19 6857.5 20 6875.0 21 7115.5 22 7356.0 23 7834.0 24 8312.0 25 8237.0 26 8162.0 27 10704.5 28 13247.0 29 16886.5 30 20526.0 31 25528.5 32 30531.0 33 38173.5 34 45816.0 35 54175.5 36 62535.0 37 68174.5 38 73814.0 39 74153.5 40 74493.0 41 76766.0 42 79039.0 43 80346.5 44 81654.0 45 90464.0 46 99274.0 47 107686.0 48 116098.0 49 122351.0 50 128604.0 51 124455.5 52 120307.0 53 120928.0 54 121549.0 55 124555.5 56 127562.0 57 125716.5 58 123871.0 59 114820.0 60 105769.0 61 94425.0 62 83081.0 63 73063.5 64 63046.0 65 53914.0 66 44782.0 67 38957.0 68 33132.0 69 29753.0 70 26374.0 71 20090.0 72 13806.0 73 11832.5 74 9859.0 75 7656.5 76 5454.0 77 4763.0 78 4072.0 79 3404.0 80 2736.0 81 2244.5 82 1753.0 83 1468.5 84 1184.0 85 862.0 86 540.0 87 382.5 88 225.0 89 169.0 90 113.0 91 98.5 92 84.0 93 68.0 94 52.0 95 45.5 96 39.0 97 26.0 98 13.0 99 16.5 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00951775032108244 2 5.098794814865593E-4 3 3.965729300451017E-4 4 0.0 5 0.0 6 2.8326637860364405E-4 7 1.6995982716218642E-4 8 0.0 9 9.06452411531661E-4 10 9.631056872523899E-4 11 0.0 12 1.1330655144145763E-4 13 3.965729300451017E-4 14 2.8326637860364405E-4 15 0.004362302230496118 16 0.0011330655144145762 17 0.0 18 2.8326637860364405E-4 19 5.6653275720728815E-5 20 5.665327572072881E-4 21 0.0 22 5.6653275720728815E-5 23 9.06452411531661E-4 24 8.497991358109322E-4 25 0.0015862917201804067 26 0.005382061193469237 27 0.00623186032928017 28 0.004532262057658305 29 0.0024927441317120673 30 0.004022382576171745 31 0.00810141842806422 32 0.0027760105103157118 33 0.004248995679054661 34 0.0024360908559913387 35 0.0028326637860364404 36 0.008158071703784948 37 0.003909076024730288 38 0.00900787083959588 39 0.004645568609099762 40 0.0024927441317120673 41 0.002945970337477898 42 0.0021528244773876947 43 0.001529638444459678 44 0.0015862917201804067 45 0.0013030253415767625 46 0.0012463720658560337 47 0.0024360908559913387 48 0.002322784304549881 49 6.231860329280168E-4 50 0.0014163318930182202 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1765123.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.99977250648965 #Duplication Level Percentage of deduplicated Percentage of total 1 72.4808762776757 34.79065572399456 2 15.25897517240107 14.648546739148502 3 5.414872930777747 7.79738006486642 4 2.451735967115107 4.70731074670014 5 1.3013327079122672 3.123183696752148 6 0.7787886035548017 2.242900548076634 7 0.48137546730564135 1.6174139044613152 8 0.33320151229911915 1.2794877431340823 9 0.2396669025639369 1.0353561120363592 >10 1.0773996088110627 9.025506667201665 >50 0.07891159604916571 2.70126987112383 >100 0.08383700105392662 8.781719860485907 >500 0.01367511897027717 4.5338012944906145 >1k 0.005351133510108457 3.7154670275279433 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2210 0.12520373934281065 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2159 0.1223144222810535 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2082 0.11795212005055737 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2060 0.11670574798470135 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2054 0.11636582833037697 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2027 0.11483618988591729 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1914 0.10843436972947496 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1870 0.10594162559776288 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1845 0.10452529370474466 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1835 0.10395876094753737 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1781 0.10089948405861801 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.665327572072881E-5 2 0.0 0.0 0.0 0.0 5.665327572072881E-5 3 0.0 0.0 0.0 0.0 5.665327572072881E-5 4 0.0 0.0 0.0 0.0 5.665327572072881E-5 5 0.0 0.0 0.0 0.0 1.1330655144145762E-4 6 0.0 0.0 0.0 0.0 1.6995982716218642E-4 7 0.0 0.0 0.0 0.0 1.6995982716218642E-4 8 0.0 0.0 0.0 0.0 2.2661310288291523E-4 9 0.0 0.0 0.0 0.0 2.2661310288291523E-4 10 0.0 0.0 0.0 0.0 2.2661310288291523E-4 11 0.0 0.0 0.0 0.0 2.2661310288291523E-4 12 0.0 0.0 0.0 0.0 6.231860329280169E-4 13 0.0 0.0 0.0 0.0 8.497991358109322E-4 14 0.0 0.0 0.0 0.0 8.497991358109322E-4 15 0.0 0.0 0.0 5.665327572072881E-5 0.0010197589629731185 16 0.0 0.0 0.0 1.1330655144145762E-4 0.0010197589629731185 17 0.0 0.0 0.0 2.2661310288291523E-4 0.0010197589629731185 18 0.0 0.0 0.0 2.8326637860364405E-4 0.0011330655144145762 19 0.0 0.0 0.0 3.3991965432437284E-4 0.0011330655144145762 20 0.0 0.0 0.0 3.3991965432437284E-4 0.0013030253415767627 21 0.0 0.0 0.0 6.231860329280169E-4 0.0014163318930182202 22 0.0 0.0 0.0 6.798393086487457E-4 0.0014163318930182202 23 0.0 0.0 0.0 0.001756251547342593 0.0014163318930182202 24 0.0 0.0 0.0 0.003512503094685186 0.0014163318930182202 25 0.0 0.0 0.0 0.004022382576171745 0.0014163318930182202 26 0.0 0.0 0.0 0.005155448090586321 0.0016995982716218644 27 0.0 0.0 0.0 0.005948593950676525 0.0016995982716218644 28 0.0 0.0 0.0 0.00957440359680317 0.001756251547342593 29 0.0 0.0 0.0 0.015409690996038236 0.0018695580987840507 30 0.0 0.0 0.0 0.030536115613472827 0.0018695580987840507 31 0.0 0.0 0.0 0.06747405138338801 0.0018695580987840507 32 0.0 0.0 0.0 0.10384545439609591 0.0018695580987840507 33 0.0 0.0 0.0 0.1363077813840735 0.0018695580987840507 34 0.0 0.0 0.0 0.1687134550963304 0.002096171201666966 35 0.0 0.0 0.0 0.21086349223255263 0.002096171201666966 36 0.0 0.0 0.0 0.2725589094924263 0.002096171201666966 37 0.0 0.0 0.0 0.3613912458225291 0.002096171201666966 38 0.0 0.0 0.0 0.47713388811997803 0.0022094777531084238 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTACG 50 8.341334E-5 26.401037 1 TAACGGC 55 0.0044833967 20.000786 36 GTCCTAC 1795 0.0 19.855932 1 GTAGGAC 1655 0.0 19.539892 3 TGTAGGA 1650 0.0 19.332449 2 TCCTACA 1835 0.0 19.181684 2 TAGGACG 1850 0.0 19.026157 4 TTAGGAC 1105 0.0 18.514992 3 CTGTAGG 1630 0.0 18.491524 1 AGGACGT 1920 0.0 18.10334 5 GTATCAA 5430 0.0 17.94914 1 GGACGTG 1920 0.0 17.874184 6 GTCCTAA 1035 0.0 17.855774 1 TAGGACC 1415 0.0 17.723572 4 GACGTGA 1090 0.0 17.55883 7 CTTTAGG 1155 0.0 17.524498 1 CGCAATA 590 0.0 17.153215 36 CCTACAG 1930 0.0 17.097664 3 ATACGAA 585 0.0 16.922302 40 TACCGTC 620 0.0 16.676659 7 >>END_MODULE