Basic Statistics
Measure | Value |
---|---|
Filename | SRR4063972_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5842740 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 7035 | 0.0 | 27.519957 | 1 |
GGTATCA | 3120 | 0.0 | 21.154163 | 1 |
TCAACGC | 10205 | 0.0 | 18.689358 | 4 |
ATACCGT | 1285 | 0.0 | 18.317774 | 6 |
AACGCAG | 10450 | 0.0 | 18.272392 | 6 |
ATCAACG | 10440 | 0.0 | 18.26867 | 3 |
CAACGCA | 10475 | 0.0 | 18.186626 | 5 |
TATCAAC | 10780 | 0.0 | 17.957607 | 2 |
CGTCGTA | 1310 | 0.0 | 17.801031 | 10 |
TACCGTC | 1305 | 0.0 | 17.194334 | 7 |
ACCGTCG | 1300 | 0.0 | 17.091394 | 8 |
ATACGAA | 1600 | 0.0 | 16.499823 | 40 |
CGCAATA | 1630 | 0.0 | 16.197533 | 36 |
CCGTCGT | 1380 | 0.0 | 15.941722 | 9 |
CGAATGC | 1690 | 0.0 | 15.360389 | 43 |
CAATACG | 1745 | 0.0 | 15.255373 | 38 |
ACGCAGA | 12595 | 0.0 | 15.143165 | 7 |
TACGAAT | 1745 | 0.0 | 15.128907 | 41 |
CGGATCG | 365 | 0.0 | 15.069622 | 26 |
GTCGTAG | 1505 | 0.0 | 14.909884 | 11 |