##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063972_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5842740 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.345678739769355 32.0 32.0 32.0 32.0 32.0 2 31.414964725454155 32.0 32.0 32.0 32.0 32.0 3 31.48324878396095 32.0 32.0 32.0 32.0 32.0 4 31.563947223391764 32.0 32.0 32.0 32.0 32.0 5 31.517144695810526 32.0 32.0 32.0 32.0 32.0 6 35.10643413877735 36.0 36.0 36.0 36.0 36.0 7 35.11814302878444 36.0 36.0 36.0 36.0 36.0 8 35.06645169903162 36.0 36.0 36.0 36.0 36.0 9 35.17103225541441 36.0 36.0 36.0 36.0 36.0 10 35.03006791334203 36.0 36.0 36.0 36.0 36.0 11 35.16965738677401 36.0 36.0 36.0 36.0 36.0 12 35.077405463874825 36.0 36.0 36.0 36.0 36.0 13 35.11852024906123 36.0 36.0 36.0 36.0 36.0 14 35.058714233390496 36.0 36.0 36.0 36.0 36.0 15 35.03569883308174 36.0 36.0 36.0 36.0 36.0 16 35.04700808182462 36.0 36.0 36.0 36.0 36.0 17 35.010749750973005 36.0 36.0 36.0 36.0 36.0 18 35.00680981868096 36.0 36.0 36.0 36.0 36.0 19 35.01110249643147 36.0 36.0 36.0 36.0 36.0 20 35.00199392750662 36.0 36.0 36.0 36.0 36.0 21 35.00109417841629 36.0 36.0 36.0 36.0 36.0 22 34.983588008365935 36.0 36.0 36.0 36.0 36.0 23 34.93308156789452 36.0 36.0 36.0 36.0 36.0 24 34.89978982463707 36.0 36.0 36.0 32.0 36.0 25 34.87548461851802 36.0 36.0 36.0 32.0 36.0 26 34.815073065034554 36.0 36.0 36.0 32.0 36.0 27 34.8137168520249 36.0 36.0 36.0 32.0 36.0 28 34.79228991877099 36.0 36.0 36.0 32.0 36.0 29 34.76431742641295 36.0 36.0 36.0 32.0 36.0 30 34.74829617610916 36.0 36.0 36.0 32.0 36.0 31 34.747270801028286 36.0 36.0 36.0 32.0 36.0 32 34.70755450353772 36.0 36.0 36.0 32.0 36.0 33 34.689163988128854 36.0 36.0 36.0 32.0 36.0 34 34.68291400952293 36.0 36.0 36.0 32.0 36.0 35 34.64516048977021 36.0 36.0 36.0 32.0 36.0 36 34.626015876112916 36.0 36.0 36.0 32.0 36.0 37 34.62321667573775 36.0 36.0 36.0 32.0 36.0 38 34.58529645337633 36.0 36.0 36.0 32.0 36.0 39 34.587198129644655 36.0 36.0 36.0 32.0 36.0 40 34.56977548205123 36.0 36.0 36.0 32.0 36.0 41 34.55404707380441 36.0 36.0 36.0 32.0 36.0 42 34.49224387872813 36.0 36.0 36.0 32.0 36.0 43 34.486396793285344 36.0 36.0 36.0 32.0 36.0 44 34.43210634051832 36.0 36.0 36.0 32.0 36.0 45 34.40648651146551 36.0 36.0 36.0 32.0 36.0 46 34.391576041377846 36.0 36.0 36.0 32.0 36.0 47 34.37127306708839 36.0 36.0 36.0 32.0 36.0 48 34.33284126967827 36.0 36.0 36.0 32.0 36.0 49 34.31869670736675 36.0 36.0 36.0 32.0 36.0 50 33.72098946727049 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 4.0 18 7.0 19 16.0 20 66.0 21 229.0 22 681.0 23 1979.0 24 4902.0 25 11114.0 26 22279.0 27 40297.0 28 65474.0 29 100291.0 30 142514.0 31 202682.0 32 291185.0 33 468566.0 34 984601.0 35 3505852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.64141245308087 17.740853540076202 11.577816221982246 27.039917784860684 2 16.2753449976475 19.952587159304713 36.345240513794856 27.42682732925293 3 18.039569604346745 23.558423247266642 28.689734587521524 29.712272560865088 4 12.325073510031253 15.818982189862977 35.4648503955336 36.391093904572166 5 14.472387954966335 36.47976805402944 33.423804584835196 15.624039406169024 6 35.02982338735489 35.38099484316407 16.334384782456148 13.2547969870249 7 30.815255044896773 30.275747526501284 20.456118503386083 18.452878925215856 8 28.475993878898237 32.771821572040096 18.85743997806508 19.89474457099658 9 27.291048584945866 13.973413543182453 18.126785783358784 40.608752088512894 10 15.557395270058642 26.805083408441384 31.589759792314982 26.047761529185 11 37.49722518839195 20.815614046768133 22.260604144734174 19.426556620105742 12 24.8650845879541 23.528244905853164 28.394133911601333 23.212536594591406 13 29.500627533818623 19.319518175888494 25.011343189371104 26.168511100921783 14 23.759789960840155 19.25194087685188 25.009978229317852 31.978290932990117 15 25.49209058975218 26.954879194094417 21.83790043630512 25.71512977984829 16 26.188524625236514 25.623989655440948 23.14632741624784 25.041158303074702 17 24.45587591709984 25.70284245111753 24.761999466346175 25.07928216543645 18 25.066873830488852 24.907701363012666 25.50646368582846 24.518961120670017 19 25.728280630266585 24.76133604576214 25.09236258231164 24.41802074165964 20 26.007177172299546 24.250537979845248 24.44258989564911 25.299694952206096 21 26.915351359122603 24.206074547215863 24.23489664095955 24.643677452701986 22 26.200157734429713 24.040192156682867 24.607443914935683 25.15220619395173 23 24.72479728097985 24.000336830978455 25.16130832135113 26.113557566690567 24 25.031945814148443 24.683973487627135 24.886259893960094 25.397820804264327 25 25.108577423940176 24.229585946679606 25.06577117569988 25.596065453680332 26 24.998237027086795 25.000718882158786 25.116441793480902 24.88460229727352 27 25.571767597539697 24.63533175349366 24.51662982371009 25.276270825256553 28 25.09238355564152 24.326169150482073 25.3039029591835 25.277544334692912 29 24.98034258164803 24.650351266170517 25.115197435104847 25.254108717076605 30 24.962670064301285 24.680239404528475 25.29242638762611 25.064664143544128 31 25.291266547981124 24.60688194725083 24.551869639659117 25.549981865108933 32 25.316701816771474 24.593457459244764 24.339288141058667 25.750552582925096 33 24.886760261752215 24.293466874980314 24.869815379517437 25.94995748375003 34 25.451624265863458 24.42613517525996 25.087059171482178 25.035181387394402 35 25.873666381289578 24.160445366262266 25.14266857587476 24.823219676573395 36 24.939526868351038 24.685036485855484 24.826933531247477 25.548503114546005 37 25.80501387417869 24.550467025462353 24.642345376334955 25.002173724023997 38 25.087410208444272 24.331900502560558 25.018687050485934 25.56200223850924 39 25.542443767602713 24.497325200962944 24.457975573791675 25.50225545764267 40 25.79310356631525 24.484521834085427 24.880374012530414 24.842000587068906 41 24.817993994721803 24.89296155584732 25.160517016010363 25.128527433420505 42 25.896952359370406 24.718696310455346 24.85005865521244 24.534292674961808 43 25.321946736922353 23.922600993828325 25.065094505772116 25.690357763477213 44 24.953766785373993 24.50316730681448 24.834146632844178 25.708919274967347 45 25.033708949790352 24.653283041189102 24.901389127079405 25.411618881941145 46 24.944772766054747 24.591664200617558 24.85736423308554 25.606198800242147 47 25.123668960502954 24.45100771675144 25.265386349329255 25.159936973416354 48 25.736405502821256 24.937172695115517 24.394520729887002 24.93190107217622 49 24.978943857074615 24.909387128890295 24.655960338972665 25.45570867506242 50 25.072064951393596 25.03435943235308 24.653401900440315 25.240173715813008 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 79.5 2 98.0 3 294.0 4 490.0 5 605.0 6 720.0 7 677.0 8 634.0 9 852.5 10 1071.0 11 1646.5 12 2222.0 13 4023.0 14 5824.0 15 7595.0 16 9366.0 17 9857.5 18 10349.0 19 10380.5 20 10412.0 21 12613.0 22 14814.0 23 17533.5 24 20253.0 25 25875.0 26 31497.0 27 38712.5 28 45928.0 29 53833.5 30 61739.0 31 70867.5 32 79996.0 33 91325.5 34 102655.0 35 121599.0 36 140543.0 37 168506.5 38 196470.0 39 220453.0 40 244436.0 41 271225.5 42 298015.0 43 310483.0 44 322951.0 45 355197.0 46 387443.0 47 411647.0 48 435851.0 49 450861.0 50 465871.0 51 458269.5 52 450668.0 53 446441.0 54 442214.0 55 441411.0 56 440608.0 57 427653.0 58 414698.0 59 380371.5 60 346045.0 61 302391.0 62 258737.0 63 224096.0 64 189455.0 65 160910.5 66 132366.0 67 113001.5 68 93637.0 69 83339.5 70 73042.0 71 56148.0 72 39254.0 73 33701.5 74 28149.0 75 21854.0 76 15559.0 77 13447.5 78 11336.0 79 9474.0 80 7612.0 81 6170.5 82 4729.0 83 3694.5 84 2660.0 85 1886.0 86 1112.0 87 777.0 88 442.0 89 345.0 90 248.0 91 208.5 92 169.0 93 132.0 94 95.0 95 101.5 96 108.0 97 77.5 98 47.0 99 44.0 100 41.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008677435586728144 2 3.2518989378271156E-4 3 3.936509240527561E-4 4 0.0 5 0.0 6 1.7115257567511133E-4 7 6.846103027004453E-5 8 1.7115257567511134E-5 9 0.001129606999455735 10 7.873018481055122E-4 11 1.7115257567511134E-5 12 8.557628783755567E-5 13 4.621119543228006E-4 14 3.4230515135022266E-4 15 0.004604004285660495 16 9.413391662131124E-4 17 1.7115257567511134E-5 18 3.594204089177338E-4 19 1.0269154540506681E-4 20 8.386476208080455E-4 21 0.0 22 1.3692206054008907E-4 23 8.044171056730233E-4 24 5.819187572953786E-4 25 0.002310559771614003 26 0.005750726542683741 27 0.006418221587816675 28 0.004278814391877783 29 0.0027726717259368037 30 0.004176122846472717 31 0.007034370860247076 32 0.003046515847016982 33 0.004586889028092984 34 0.0027726717259368037 35 0.003046515847016982 36 0.0081468626021353 37 0.003970739755662583 38 0.007855903223487611 39 0.004193238104040228 40 0.0026528649229642254 41 0.003645549861879871 42 0.0020880614232363583 43 0.0013863358629684019 44 0.0013521053478333797 45 0.0013349900902658684 46 0.0010440307116181791 47 0.0021565224535064027 48 0.002344790286749025 49 4.621119543228006E-4 50 0.0016088342113460465 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5842740.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.18361753109776 #Duplication Level Percentage of deduplicated Percentage of total 1 64.84035292922941 24.10998883901861 2 16.06908954880065 11.950137597111276 3 6.972566778676984 7.7779576892509015 4 3.662807659263251 5.447857563680807 5 2.163156408396628 4.021699027488166 6 1.3864028987871095 3.0930885079503074 7 0.9176756331308416 2.388574983196164 8 0.6835306588679759 2.0332914072100863 9 0.49978670717492396 1.6725489990047213 >10 2.5185296684306095 16.698216382563913 >50 0.16566623870300884 4.246857347375453 >100 0.0999597019032673 7.243340984373497 >500 0.011607248799424217 3.013460863426053 >1k 0.008821490936585784 6.2129483379099835 >5k 4.642889966561137E-5 0.09003147044003527 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.13457727025334E-5 2 0.0 0.0 0.0 0.0 5.13457727025334E-5 3 0.0 0.0 0.0 0.0 5.13457727025334E-5 4 0.0 0.0 0.0 0.0 6.846103027004453E-5 5 0.0 0.0 0.0 0.0 6.846103027004453E-5 6 0.0 0.0 0.0 0.0 1.1980680297257794E-4 7 0.0 0.0 0.0 0.0 1.1980680297257794E-4 8 0.0 0.0 0.0 0.0 1.3692206054008907E-4 9 0.0 0.0 0.0 5.13457727025334E-5 1.3692206054008907E-4 10 0.0 0.0 0.0 8.557628783755567E-5 1.3692206054008907E-4 11 0.0 0.0 0.0 1.1980680297257794E-4 1.3692206054008907E-4 12 0.0 0.0 0.0 1.1980680297257794E-4 2.3961360594515588E-4 13 0.0 0.0 0.0 1.1980680297257794E-4 3.2518989378271156E-4 14 0.0 0.0 0.0 1.1980680297257794E-4 3.594204089177338E-4 15 0.0 0.0 0.0 1.3692206054008907E-4 4.4499669675528944E-4 16 0.0 0.0 0.0 1.3692206054008907E-4 5.13457727025334E-4 17 0.0 0.0 0.0 1.3692206054008907E-4 5.305729845928452E-4 18 0.0 0.0 0.0 1.540373181076002E-4 5.648034997278674E-4 19 0.0 0.0 0.0 1.540373181076002E-4 5.648034997278674E-4 20 0.0 0.0 0.0 2.053830908101336E-4 6.674950451329342E-4 21 0.0 0.0 0.0 2.3961360594515588E-4 7.188408178354676E-4 22 0.0 0.0 0.0 3.765356664852449E-4 7.359560754029787E-4 23 0.0 0.0 0.0 5.476882421603563E-4 7.530713329704898E-4 24 0.0 0.0 0.0 6.674950451329342E-4 8.215323632405344E-4 25 0.0 0.0 0.0 7.359560754029787E-4 8.215323632405344E-4 26 0.0 0.0 0.0 0.0010611459691856904 8.728781359430678E-4 27 0.0 0.0 0.0 0.0013863358629684019 8.899933935105789E-4 28 0.0 0.0 0.0 0.0028924785289093815 8.899933935105789E-4 29 0.0 0.0 0.0 0.00664071993619432 8.899933935105789E-4 30 0.0 0.0 0.0 0.014154318008331708 8.899933935105789E-4 31 0.0 0.0 0.0 0.03284417927205387 9.071086510780901E-4 32 0.0 0.0 0.0 0.05220153558090896 9.413391662131123E-4 33 0.0 0.0 0.0 0.0721065801319244 9.413391662131123E-4 34 0.0 0.0 0.0 0.09464737434833657 0.001026915454050668 35 0.0 0.0 0.0 0.12059410482068345 0.001026915454050668 36 0.0 0.0 0.0 0.15843593930245056 0.001026915454050668 37 0.0 0.0 0.0 0.21719261853171629 0.001026915454050668 38 0.0 0.0 0.0 0.3032823640962973 0.0010611459691856904 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7035 0.0 27.519957 1 GGTATCA 3120 0.0 21.154163 1 TCAACGC 10205 0.0 18.689358 4 ATACCGT 1285 0.0 18.317774 6 AACGCAG 10450 0.0 18.272392 6 ATCAACG 10440 0.0 18.26867 3 CAACGCA 10475 0.0 18.186626 5 TATCAAC 10780 0.0 17.957607 2 CGTCGTA 1310 0.0 17.801031 10 TACCGTC 1305 0.0 17.194334 7 ACCGTCG 1300 0.0 17.091394 8 ATACGAA 1600 0.0 16.499823 40 CGCAATA 1630 0.0 16.197533 36 CCGTCGT 1380 0.0 15.941722 9 CGAATGC 1690 0.0 15.360389 43 CAATACG 1745 0.0 15.255373 38 ACGCAGA 12595 0.0 15.143165 7 TACGAAT 1745 0.0 15.128907 41 CGGATCG 365 0.0 15.069622 26 GTCGTAG 1505 0.0 14.909884 11 >>END_MODULE