SRR4063971_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4063971_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1015172
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2798	0.2756183188661626	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2156	0.212377803958344	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2120	0.20883160686070934	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2000	0.1970109498685937	No Hit
GTCCTACAGTGGACATTTCTAAATT	1950	0.19208567612187885	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1728	0.17021746068646496	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1719	0.16933091141205628	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1428	0.1406658182061759	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1361	0.134065951385578	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1272	0.1252989641164256	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1069	0.10530235270476333	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCGTA	55	1.12692815E-5	15.546341	9
CGAGACT	50	8.730601E-5	15.195625	4
ACGAACG	45	6.746447E-4	14.781535	15
AATACGA	45	6.7742367E-4	14.773524	5
TCCAACG	150	0.0	13.936875	18
CGTCTTA	55	1.9548752E-4	13.821695	15
ATAACAC	55	1.9647076E-4	13.813524	3
GCGTAAC	70	7.248631E-6	13.572872	11
GGTCGCG	70	7.2634084E-6	13.570197	7
CCAACGA	100	1.0018994E-8	13.303382	19
CGCGTAA	65	5.4434153E-5	13.155245	10
CCCTTAA	60	4.099795E-4	12.663021	1
GTATAGA	90	5.4176417E-7	12.663021	1
TTTTCGG	100	1.4357283E-7	12.35314	16
GCCGGTT	85	3.9348215E-6	12.295425	11
GGGTCGC	85	3.9500283E-6	12.291184	6
GTGTAAG	70	1.09311455E-4	12.210771	1
CGGACCA	165	0.0	12.0915985	9
CTCTTAC	55	0.0030738038	12.087428	1
ATTAGAC	55	0.0030749384	12.086834	3