##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063970_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1457933 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249555363655258 32.0 32.0 32.0 32.0 32.0 2 30.873260979756957 32.0 32.0 32.0 32.0 32.0 3 30.912804635055245 32.0 32.0 32.0 32.0 32.0 4 30.929869891140402 32.0 32.0 32.0 32.0 32.0 5 30.84037469485909 32.0 32.0 32.0 32.0 32.0 6 34.50326729691968 36.0 36.0 36.0 32.0 36.0 7 34.42746271605074 36.0 36.0 36.0 32.0 36.0 8 34.3872098374891 36.0 36.0 36.0 32.0 36.0 9 34.51100496387694 36.0 36.0 36.0 32.0 36.0 10 34.23209365588131 36.0 36.0 36.0 32.0 36.0 11 34.50547178779821 36.0 36.0 36.0 32.0 36.0 12 34.314015801823544 36.0 36.0 36.0 32.0 36.0 13 34.4051317858914 36.0 36.0 36.0 32.0 36.0 14 34.30954646063982 36.0 36.0 36.0 32.0 36.0 15 34.25278253527426 36.0 36.0 36.0 32.0 36.0 16 34.247613573463255 36.0 36.0 36.0 32.0 36.0 17 34.166679127230125 36.0 36.0 36.0 32.0 36.0 18 34.17080071580793 36.0 36.0 36.0 32.0 36.0 19 34.17229392571538 36.0 36.0 36.0 32.0 36.0 20 34.137442529937935 36.0 36.0 36.0 32.0 36.0 21 34.120898559810364 36.0 36.0 36.0 32.0 36.0 22 34.10145665130016 36.0 36.0 36.0 32.0 36.0 23 34.065864480740885 36.0 36.0 36.0 32.0 36.0 24 34.04910239359422 36.0 36.0 36.0 32.0 36.0 25 33.65501158146499 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 11.0 5 19.0 6 55.0 7 22.0 8 82.0 9 98.0 10 144.0 11 40.0 12 92.0 13 84.0 14 183.0 15 239.0 16 467.0 17 585.0 18 710.0 19 997.0 20 1477.0 21 2214.0 22 3437.0 23 5073.0 24 7523.0 25 11043.0 26 15811.0 27 20907.0 28 28246.0 29 38412.0 30 50560.0 31 68098.0 32 98246.0 33 138907.0 34 300316.0 35 663828.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.71434648895891 17.291237527223625 11.644162720070483 25.350253263746986 2 16.303714079149 19.91016957755831 38.244259728999666 25.541856614293025 3 18.974595000212634 24.640270745221557 28.30512613330663 28.08000812125918 4 12.438943584249108 15.54511264012709 36.00855492899587 36.00738884662793 5 14.52562520450294 36.90203683213713 33.03834605910401 15.533991904255926 6 33.45189723973622 35.5798735425043 17.402140187127458 13.56608903063202 7 29.999677551919284 30.530344765604255 20.808672344039753 18.661305338436705 8 28.219067733227938 32.60436093465459 19.522586205240312 19.653985126877153 9 27.838114191600326 14.15488608289871 18.69427669503157 39.31272303046939 10 16.345395610527103 26.243362567661144 30.923348594480593 26.487893227331156 11 37.01042410865944 21.22808065044132 23.005237104034514 18.756258136864723 12 25.64940435377343 23.420355266923774 28.62629710999877 22.303943269304025 13 29.41913689003402 19.586104749047177 25.663646964591997 25.331111396326804 14 23.91192888749786 19.993973749432893 25.31642963185649 30.777667731212755 15 24.977334386600898 27.38809089305605 22.720106955615204 24.914467764727842 16 25.272333547251268 25.720668933967993 24.452741867400622 24.554255651380114 17 23.444305498551135 25.792826639908522 25.593307353044125 25.169560508496215 18 24.4673643312408 24.803863354762093 27.07828647722865 23.650485836768457 19 25.483413942365114 24.372231138104343 25.94070946015516 24.20364545937538 20 25.858423603388385 24.04251959855568 25.403641006631243 24.695415791424686 21 27.086050438626597 23.771570955917685 24.74986614681292 24.3925124586428 22 26.019997693524292 24.1293740664265 25.39141441876812 24.459213821281082 23 24.24886472459918 24.22847610515585 25.95203525789544 25.570623912349532 24 24.62073888988042 25.029036642458024 25.8763849036917 24.47383956396985 25 24.790099693635824 24.50295621182032 25.88533618714918 24.821607907394682 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 472.0 1 472.0 2 732.0 3 992.0 4 992.0 5 992.0 6 2777.5 7 4563.0 8 4563.0 9 4563.0 10 4343.5 11 4124.0 12 4124.0 13 4124.0 14 3987.0 15 3850.0 16 3850.0 17 3850.0 18 6784.5 19 9719.0 20 9719.0 21 9719.0 22 16075.5 23 22432.0 24 22432.0 25 22432.0 26 34712.5 27 46993.0 28 46993.0 29 46993.0 30 59315.0 31 71637.0 32 71637.0 33 71637.0 34 82892.5 35 94148.0 36 94148.0 37 94148.0 38 104588.5 39 115029.0 40 115029.0 41 115029.0 42 131656.5 43 148284.0 44 148284.0 45 148284.0 46 166356.5 47 184429.0 48 184429.0 49 184429.0 50 189762.5 51 195096.0 52 195096.0 53 195096.0 54 178525.0 55 161954.0 56 161954.0 57 161954.0 58 149873.0 59 137792.0 60 137792.0 61 137792.0 62 122428.0 63 107064.0 64 107064.0 65 107064.0 66 88818.0 67 70572.0 68 70572.0 69 70572.0 70 53803.5 71 37035.0 72 37035.0 73 37035.0 74 28519.0 75 20003.0 76 20003.0 77 20003.0 78 16180.0 79 12357.0 80 12357.0 81 12357.0 82 8453.0 83 4549.0 84 4549.0 85 4549.0 86 3538.0 87 2527.0 88 2527.0 89 2527.0 90 1806.5 91 1086.0 92 1086.0 93 1086.0 94 748.0 95 410.0 96 410.0 97 410.0 98 613.0 99 816.0 100 816.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0383419539855398 2 0.005144269318274571 3 0.002126297984886823 4 0.004115415454619657 5 0.008916733485009256 6 0.0144039540911688 7 0.022909146030716088 8 0.03697014883399991 9 0.05027665880393681 10 0.0587132604859071 11 0.05692991378890525 12 0.06474920315268261 13 0.06488638366783658 14 0.06680691087999242 15 0.06035942666775497 16 0.06776717448607035 17 0.06385752980418168 18 0.08011342084992931 19 0.07592941513773267 20 0.08182817728935417 21 0.07634095668319463 22 0.07990765007719834 23 0.08491473888031892 24 0.0790845669862744 25 0.08025060136508332 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1457933.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.849097941648395 #Duplication Level Percentage of deduplicated Percentage of total 1 71.01898997782894 30.43099657276938 2 15.248683051018311 13.067846270684749 3 5.70216623608962 7.329980385892942 4 2.6505677437873545 4.542977474180734 5 1.4276479756033043 3.0586713966411025 6 0.8719147031322214 2.2416455106765505 7 0.5487489891269132 1.6459379426335754 8 0.3967382490723372 1.3599900873358937 9 0.3010315727197681 1.1609038208698015 >10 1.5766359385070798 12.252761335240669 >50 0.12280876673835112 3.6700179482656745 >100 0.11255191254485827 10.302716622613698 >500 0.015092530448572509 4.375140792570305 >1k 0.006261794547811999 4.113501951891234 >5k 1.6055883455928202E-4 0.4469118877336966 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6496 0.4455623132201548 No Hit TATCAACGCAGAGTACTTTTTTTTT 4161 0.2854040617778732 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3571 0.24493580980744656 No Hit GTACATGGGGTGGTATCAACGCAAA 2463 0.1689378044121369 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2327 0.15960952938166567 No Hit GGTATCAACGCAGAGTACTTTTTTT 2240 0.15364217697246718 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2123 0.14561711683595885 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1742 0.11948422869912402 No Hit GAATAGGACCGCGGTTCTATTTTGT 1694 0.11619189633542831 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1673 0.11475150092631144 No Hit GTATCTGATCGTCTTCGAACCTCCG 1630 0.11180211985050068 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1625 0.1114591685626157 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1560 0.10700080182011107 No Hit ATCAGATACCGTCGTAGTTCCGACC 1544 0.10590335769887917 No Hit GTATCAACGCAGAGTACATGGGGTG 1544 0.10590335769887917 No Hit CTATTGGAGCTGGAATTACCGCGGC 1516 0.10398283048672333 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.859025757699429E-5 0.0 6 0.0 0.0 0.0 6.859025757699429E-5 0.0 7 0.0 0.0 0.0 6.859025757699429E-5 0.0 8 0.0 0.0 0.0 6.859025757699429E-5 0.0 9 0.0 0.0 0.0 6.859025757699429E-5 0.0 10 0.0 0.0 0.0 6.859025757699429E-5 0.0 11 0.0 0.0 0.0 6.859025757699429E-5 0.0 12 0.0 0.0 0.0 6.859025757699429E-5 0.0 13 0.0 0.0 0.0 6.859025757699429E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCTA 75 5.8311343E-8 15.202828 16 TCCAACG 125 0.0 14.443183 18 CGTCTTA 85 2.6925045E-7 13.41426 15 TTATACC 65 5.4600758E-5 13.151779 4 TTACACC 105 1.9974323E-8 12.664676 4 TCCTATA 75 1.4829146E-5 12.662938 2 ATACCGT 310 0.0 12.562542 6 GCGTTAT 130 1.9826984E-10 12.422403 1 GCGCGCT 100 1.4386751E-7 12.3523 15 TTCTCGT 100 1.4425495E-7 12.349754 11 CGTCGTA 285 0.0 12.333088 10 TACCGTC 310 0.0 12.25698 7 CCGTCGT 290 0.0 12.120449 9 CACGCGC 95 1.0389995E-6 12.000586 12 CGTTATT 135 3.7289283E-10 11.959442 2 ACCGTCG 305 0.0 11.835831 8 CCAACGA 145 9.640644E-11 11.795703 19 GTCGTAG 300 0.0 11.716434 11 GCCTTAG 65 8.026541E-4 11.691674 1 TTGCACC 65 8.033477E-4 11.690471 4 >>END_MODULE