##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063970_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1457933 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24024766570206 32.0 32.0 32.0 32.0 32.0 2 31.389457540229902 32.0 32.0 32.0 32.0 32.0 3 31.4740869436387 32.0 32.0 32.0 32.0 32.0 4 31.56627567933506 32.0 32.0 32.0 32.0 32.0 5 31.498632653215203 32.0 32.0 32.0 32.0 32.0 6 35.08215329511027 36.0 36.0 36.0 36.0 36.0 7 35.11159772088292 36.0 36.0 36.0 36.0 36.0 8 35.05323152710035 36.0 36.0 36.0 36.0 36.0 9 35.16898238807956 36.0 36.0 36.0 36.0 36.0 10 35.01455348085268 36.0 36.0 36.0 36.0 36.0 11 35.16346361595492 36.0 36.0 36.0 36.0 36.0 12 35.06379031135176 36.0 36.0 36.0 36.0 36.0 13 35.10937265292712 36.0 36.0 36.0 36.0 36.0 14 35.06084916110685 36.0 36.0 36.0 36.0 36.0 15 35.03192945080467 36.0 36.0 36.0 36.0 36.0 16 35.039083414669946 36.0 36.0 36.0 36.0 36.0 17 34.996595865516454 36.0 36.0 36.0 36.0 36.0 18 34.99239196862956 36.0 36.0 36.0 36.0 36.0 19 34.991411813848785 36.0 36.0 36.0 36.0 36.0 20 34.97893593189811 36.0 36.0 36.0 36.0 36.0 21 34.97057477949947 36.0 36.0 36.0 36.0 36.0 22 34.96167587948143 36.0 36.0 36.0 36.0 36.0 23 34.90801429146607 36.0 36.0 36.0 32.0 36.0 24 34.878456005865836 36.0 36.0 36.0 32.0 36.0 25 34.849851810748504 36.0 36.0 36.0 32.0 36.0 26 34.795771822161925 36.0 36.0 36.0 32.0 36.0 27 34.7894032167459 36.0 36.0 36.0 32.0 36.0 28 34.76500771983349 36.0 36.0 36.0 32.0 36.0 29 34.73105279872257 36.0 36.0 36.0 32.0 36.0 30 34.70122083799461 36.0 36.0 36.0 32.0 36.0 31 34.69351266484811 36.0 36.0 36.0 32.0 36.0 32 34.64400147331873 36.0 36.0 36.0 32.0 36.0 33 34.61541854118125 36.0 36.0 36.0 32.0 36.0 34 34.591574509939754 36.0 36.0 36.0 32.0 36.0 35 34.54796276646458 36.0 36.0 36.0 32.0 36.0 36 34.51475342145353 36.0 36.0 36.0 32.0 36.0 37 34.49367014807951 36.0 36.0 36.0 32.0 36.0 38 34.44675646960457 36.0 36.0 36.0 32.0 36.0 39 34.434926707880265 36.0 36.0 36.0 32.0 36.0 40 34.407791030177656 36.0 36.0 36.0 32.0 36.0 41 34.38725442115653 36.0 36.0 36.0 32.0 36.0 42 34.30230607305 36.0 36.0 36.0 32.0 36.0 43 34.28355692614132 36.0 36.0 36.0 32.0 36.0 44 34.19853930187464 36.0 36.0 36.0 32.0 36.0 45 34.16187918100489 36.0 36.0 36.0 32.0 36.0 46 34.099074511654514 36.0 36.0 36.0 32.0 36.0 47 34.05010655496515 36.0 36.0 36.0 32.0 36.0 48 33.985646802699435 36.0 36.0 36.0 32.0 36.0 49 33.95894118591183 36.0 36.0 36.0 32.0 36.0 50 33.343886858998324 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 7.0 20 21.0 21 65.0 22 196.0 23 488.0 24 1385.0 25 3132.0 26 6164.0 27 11128.0 28 18419.0 29 27540.0 30 38559.0 31 54297.0 32 78886.0 33 125157.0 34 256808.0 35 835678.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.57218998961453 18.221766133491013 12.261165065859243 25.944878811035217 2 15.538215878973446 20.726400755044143 37.71509978544894 26.02028358053347 3 18.217578795097424 25.191796297071118 28.692794632378714 27.89783027545275 4 12.088964307687665 16.199509854019357 36.051107972725774 35.66041786556721 5 14.099619118299675 37.22825397326214 32.84883461722864 15.823292291209542 6 33.423118103668834 36.0632293297831 17.023645151931056 13.490007414617017 7 29.752347846127254 30.747524575906148 20.858037274715144 18.642090303251454 8 28.019002257992824 32.73232222078944 19.482390125191024 19.7662853960267 9 27.71510507727753 13.983621950893287 18.61142567494806 39.68984729688112 10 16.135911249024296 26.400795104264834 31.018600446388767 26.4446932003221 11 37.22537318244391 21.069555322501103 22.88150415691256 18.823567338142425 12 25.552667137654073 23.469851090244386 28.667562914543222 22.30991885755832 13 29.483740291879784 19.527768499014698 25.79823846017193 25.190252748933588 14 23.89104834179395 19.879404443694522 25.422396533169266 30.80715068134226 15 24.96023321615365 27.43513675726657 22.759015690645633 24.84561433593415 16 25.274294133301872 25.74969614328319 24.428365264581693 24.547644458833247 17 23.528241695606038 25.795012528010545 25.564617852809423 25.11212792357399 18 24.483702567134614 24.64722218983229 27.285004962518748 23.584070280514347 19 25.500005830171897 24.30228275236242 26.129115672668085 24.068595744797598 20 25.895845122348543 23.90116089647959 25.661333744877133 24.541660236294735 21 27.074083651306335 23.637094434380728 24.95841715634395 24.33040475796899 22 25.903214898373108 24.011767360732435 25.68201101423867 24.40300672665579 23 24.25326989148261 23.875746524336332 26.279851542228222 25.591132041952836 24 24.685940203975107 24.772364521308738 26.10213296586994 24.439562308846217 25 24.8600044996104 24.256261043251133 26.20282268242628 24.68091177471219 26 24.116796892952415 25.370563577659382 26.696148498436393 23.81649103095181 27 24.758821931564697 24.647493147414952 25.896529395463435 24.69715552555692 28 23.94903252756931 24.736756544303304 26.516955203855485 24.7972557242719 29 24.12207446753783 24.49260818836996 26.245338319510914 25.1399790245813 30 23.935058859681977 24.992420469807406 26.515665962902148 24.556854707608476 31 24.858814418386743 24.754412885426518 25.38884769380306 24.997925002383674 32 24.436028852933994 25.109817295846838 25.21318685539785 25.240966995821317 33 23.98765582836141 24.60081736579932 26.109404645458323 25.30212216038094 34 24.885879984498196 24.758847516453518 26.155793112672725 24.19947938637556 35 25.33502161684241 24.57351063968431 26.06888992386948 24.022577819603796 36 24.08555240015914 25.332757130509943 25.72313454335926 24.858555925971658 37 25.09671577907647 25.177380854391306 25.379866655691824 24.346036710840398 38 24.378485536523964 25.07377504613084 25.78580199065722 24.76193742668798 39 25.20481907876686 24.671576105446842 25.23479427549195 24.888810540294344 40 25.434255941438895 25.125866316938932 25.598396593446992 23.841481148175177 41 24.141705969989545 25.357159515245296 26.37993760854713 24.121196906218017 42 25.522255176595504 25.798884428921443 25.350913775080457 23.327946619402596 43 24.44312291524768 24.81214508195653 25.920446228737497 24.824285774058293 44 24.050145825388157 25.49694493754064 25.238492415159257 25.214416821911946 45 24.40785177706199 25.6833059882901 25.253581834843253 24.65526039980465 46 24.302289850141847 25.250769593775207 25.19397604244975 25.2529645136332 47 24.722770382472955 25.208672432466546 25.480912019765324 24.58764516529518 48 25.385588331726 25.573735408827204 24.423383739099062 24.617292520347732 49 24.45520099483992 25.896429372470287 24.782241586146867 24.866128046542922 50 24.605430483744627 26.176094951842284 24.43251266532137 24.785961899091717 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 204.0 1 139.0 2 74.0 3 197.0 4 320.0 5 370.5 6 421.0 7 393.5 8 366.0 9 549.5 10 733.0 11 1110.5 12 1488.0 13 2658.0 14 3828.0 15 5192.5 16 6557.0 17 7057.0 18 7557.0 19 7487.0 20 7417.0 21 7718.0 22 8019.0 23 8701.0 24 9383.0 25 9695.0 26 10007.0 27 12740.0 28 15473.0 29 17840.5 30 20208.0 31 23240.0 32 26272.0 33 30831.5 34 35391.0 35 40842.5 36 46294.0 37 51732.0 38 57170.0 39 61063.5 40 64957.0 41 68540.5 42 72124.0 43 72040.5 44 71957.0 45 79529.0 46 87101.0 47 93036.5 48 98972.0 49 102557.5 50 106143.0 51 102752.5 52 99362.0 53 99538.0 54 99714.0 55 101434.5 56 103155.0 57 100680.5 58 98206.0 59 89650.5 60 81095.0 61 72125.0 62 63155.0 63 55276.5 64 47398.0 65 40473.0 66 33548.0 67 28891.0 68 24234.0 69 21745.0 70 19256.0 71 14951.0 72 10646.0 73 9005.0 74 7364.0 75 5692.0 76 4020.0 77 3640.5 78 3261.0 79 2659.5 80 2058.0 81 1691.5 82 1325.0 83 1108.0 84 891.0 85 630.5 86 370.0 87 275.0 88 180.0 89 133.0 90 86.0 91 67.5 92 49.0 93 49.0 94 49.0 95 43.5 96 38.0 97 28.0 98 18.0 99 18.5 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008710962712278274 2 3.429512878849714E-4 3 4.115415454619657E-4 4 0.0 5 0.0 6 1.3718051515398854E-4 7 6.859025757699427E-5 8 6.859025757699427E-5 9 4.115415454619657E-4 10 7.544928333469371E-4 11 0.0 12 2.0577077273098286E-4 13 2.743610303079771E-4 14 1.3718051515398854E-4 15 0.003978234939465668 16 6.173123181929485E-4 17 0.0 18 2.743610303079771E-4 19 0.0 20 5.487220606159542E-4 21 0.0 22 1.3718051515398854E-4 23 6.859025757699429E-4 24 6.859025757699429E-4 25 0.001989117469732834 26 0.005898762151621508 27 0.006104532924352491 28 0.004252595969773646 29 0.002469249272771794 30 0.004046825197042663 31 0.006859025757699429 32 0.003909644681888674 33 0.005418630348582548 34 0.0026064297879257827 35 0.0028807908182337597 36 0.007750699106200354 37 0.003635283651580697 38 0.008436601681970296 39 0.004184005712196651 40 0.0025378395303487884 41 0.0028122005606567657 42 0.0017147564394248572 43 0.001783346697001851 44 0.0017147564394248572 45 0.0014403954091168798 46 0.0014403954091168798 47 0.001783346697001851 48 0.002126297984886823 49 6.859025757699429E-4 50 0.0010288538636549142 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1457933.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.26691554773169 #Duplication Level Percentage of deduplicated Percentage of total 1 72.71709466044629 34.37112772191726 2 14.797883945231868 13.989006614488186 3 5.303208629051202 7.519989432040954 4 2.4039343605894192 4.545062496170818 5 1.2885164092049821 3.0452098147879187 6 0.7850007212169611 2.2262737676802336 7 0.5187451275767118 1.7163637495176014 8 0.3645568917636154 1.3785183852267497 9 0.2511565572849957 1.0684256204204037 >10 1.3613401355910975 11.491965932854882 >50 0.10188734267477433 3.359003262349878 >100 0.09089317794257006 8.985481917684321 >500 0.011836531069253154 3.8281303425395388 >1k 0.0039455103564177176 2.4754409423213204 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1900 0.13032148939628913 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1738 0.11920986766881606 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1699 0.11653484762331329 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1659 0.11379123732023352 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1567 0.10748093362315002 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1567 0.10748093362315002 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1542 0.10576617718372518 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1479 0.10144499095637455 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.859025757699429E-5 0.0 6 0.0 0.0 0.0 6.859025757699429E-5 0.0 7 0.0 0.0 0.0 6.859025757699429E-5 0.0 8 0.0 0.0 0.0 6.859025757699429E-5 0.0 9 0.0 0.0 0.0 6.859025757699429E-5 0.0 10 0.0 0.0 0.0 6.859025757699429E-5 0.0 11 0.0 0.0 0.0 6.859025757699429E-5 0.0 12 0.0 0.0 0.0 6.859025757699429E-5 0.0 13 0.0 0.0 0.0 6.859025757699429E-5 0.0 14 0.0 0.0 0.0 6.859025757699429E-5 0.0 15 0.0 0.0 0.0 6.859025757699429E-5 0.0 16 0.0 0.0 0.0 1.3718051515398857E-4 0.0 17 0.0 0.0 0.0 1.3718051515398857E-4 0.0 18 0.0 0.0 0.0 1.3718051515398857E-4 0.0 19 0.0 0.0 0.0 2.0577077273098283E-4 0.0 20 0.0 0.0 0.0 2.7436103030797714E-4 0.0 21 0.0 0.0 0.0 4.8013180303895994E-4 0.0 22 0.0 0.0 0.0 9.602636060779199E-4 0.0 23 0.0 0.0 0.0 0.002194888242463817 0.0 24 0.0 0.0 0.0 0.003772464166734685 0.0 25 0.0 0.0 0.0 0.0043211862273506395 0.0 26 0.0 0.0 0.0 0.005830171894044514 0.0 27 0.0 0.0 0.0 0.007407747818315382 0.0 28 0.0 0.0 0.0 0.010768670439588101 0.0 29 0.0 0.0 0.0 0.01666743259120961 0.0 30 0.0 0.0 0.0 0.028464956894452626 0.0 31 0.0 0.0 0.0 0.054460664516133454 0.0 32 0.0 0.0 0.0 0.08395447527424099 0.0 33 0.0 0.0 0.0 0.11056749521411478 0.0 34 0.0 0.0 0.0 0.1392382228812984 0.0 35 0.0 0.0 0.0 0.17312181012433356 0.0 36 0.0 0.0 0.0 0.22044908785245962 0.0 37 0.0 0.0 0.0 0.28924511620218485 0.0 38 0.0 0.0 0.0 0.38691764299182474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGG 55 1.5940568E-4 23.999514 18 AGTATCG 60 2.8735652E-4 21.999554 8 GTATCGA 65 4.933506E-4 20.307281 9 GTCGGTA 55 0.0044854633 19.998909 11 TAGGACG 720 0.0 19.860708 4 GTACTAA 80 8.9868554E-5 19.25093 1 GTATCAA 4835 0.0 18.975065 1 AATCGGT 70 8.125526E-4 18.856762 19 ACTATAC 105 1.7935527E-6 18.85676 3 GTCCTAA 365 0.0 18.685835 1 CGCAATA 610 0.0 18.03304 36 ACTAGAC 135 5.529182E-8 17.925564 3 AATCACG 375 0.0 17.600246 34 ACCGTAT 75 0.0012912189 17.599644 8 TATCGAG 75 0.0012915159 17.59904 10 AACGCAG 5245 0.0 17.322813 6 GGACGTG 865 0.0 17.040115 6 AGGACGT 885 0.0 16.903614 5 TAGCGGC 625 0.0 16.896236 30 GATATAC 470 0.0 16.851877 1 >>END_MODULE