FastQCFastQC Report
Thu 2 Feb 2017
SRR4063967_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4063967_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1140680
Sequences flagged as poor quality0
Sequence length50
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTAC7450.018.899011
TCCTACA8450.018.4840852
GTATCAA22400.018.4639721
ATAAGAC1456.313712E-918.204993
ATAGTAG1355.531365E-817.9240513
GTCCTAA4800.017.4163721
GTGTATA4550.017.40631
TAATACT2150.017.394294
TAAGACT1651.6607373E-917.3322814
GATATAC3950.016.7085781
TAGGACG7250.016.688644
TTAGGAC4900.016.6105083
GTTATAG2400.016.4997221
AACGCAG24700.016.476736
AGGACGT7600.016.2095415
GTATATC3950.016.150213
GTATATA1653.11029E-815.9997291
GGACGTG7700.015.9990286
GGCGTTA2201.8189894E-1115.99832542
AATCACG3600.015.89001334
Produced by FastQC (version 0.11.5)