##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063967_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1140680 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310689237998385 32.0 32.0 32.0 32.0 32.0 2 31.37933338008907 32.0 32.0 32.0 32.0 32.0 3 31.462554791878528 32.0 32.0 32.0 32.0 32.0 4 31.549673002068943 32.0 32.0 32.0 32.0 32.0 5 31.493730055756217 32.0 32.0 32.0 32.0 32.0 6 35.076614826244 36.0 36.0 36.0 36.0 36.0 7 35.095219518182134 36.0 36.0 36.0 36.0 36.0 8 35.04178735491111 36.0 36.0 36.0 36.0 36.0 9 35.16181663569099 36.0 36.0 36.0 36.0 36.0 10 35.00552039134551 36.0 36.0 36.0 36.0 36.0 11 35.15053827541467 36.0 36.0 36.0 36.0 36.0 12 35.06107672616334 36.0 36.0 36.0 36.0 36.0 13 35.107197461163516 36.0 36.0 36.0 36.0 36.0 14 35.05362327734334 36.0 36.0 36.0 36.0 36.0 15 35.01140460076446 36.0 36.0 36.0 36.0 36.0 16 35.03509748571028 36.0 36.0 36.0 36.0 36.0 17 34.998613107970684 36.0 36.0 36.0 36.0 36.0 18 35.003646947434866 36.0 36.0 36.0 36.0 36.0 19 34.99538608549286 36.0 36.0 36.0 36.0 36.0 20 34.98343093593295 36.0 36.0 36.0 36.0 36.0 21 34.97786934109479 36.0 36.0 36.0 36.0 36.0 22 34.96925079776975 36.0 36.0 36.0 36.0 36.0 23 34.91860118525791 36.0 36.0 36.0 32.0 36.0 24 34.89567187993127 36.0 36.0 36.0 32.0 36.0 25 34.86374180313497 36.0 36.0 36.0 32.0 36.0 26 34.80701599046183 36.0 36.0 36.0 32.0 36.0 27 34.79705000526002 36.0 36.0 36.0 32.0 36.0 28 34.774437177823756 36.0 36.0 36.0 32.0 36.0 29 34.740510923308904 36.0 36.0 36.0 32.0 36.0 30 34.72054476277308 36.0 36.0 36.0 32.0 36.0 31 34.70799172423467 36.0 36.0 36.0 32.0 36.0 32 34.66981800329628 36.0 36.0 36.0 32.0 36.0 33 34.65067152926325 36.0 36.0 36.0 32.0 36.0 34 34.629908475646104 36.0 36.0 36.0 32.0 36.0 35 34.59095802503769 36.0 36.0 36.0 32.0 36.0 36 34.56376021320616 36.0 36.0 36.0 32.0 36.0 37 34.54631623242277 36.0 36.0 36.0 32.0 36.0 38 34.50949609005155 36.0 36.0 36.0 32.0 36.0 39 34.478474243433745 36.0 36.0 36.0 32.0 36.0 40 34.47773608724621 36.0 36.0 36.0 32.0 36.0 41 34.44756636392327 36.0 36.0 36.0 32.0 36.0 42 34.40029806781919 36.0 36.0 36.0 32.0 36.0 43 34.38253059578497 36.0 36.0 36.0 32.0 36.0 44 34.31060946102325 36.0 36.0 36.0 32.0 36.0 45 34.282009853771434 36.0 36.0 36.0 32.0 36.0 46 34.239857804116845 36.0 36.0 36.0 32.0 36.0 47 34.2067749061963 36.0 36.0 36.0 32.0 36.0 48 34.1506241890802 36.0 36.0 36.0 32.0 36.0 49 34.12974804502577 36.0 36.0 36.0 32.0 36.0 50 33.535323666584844 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 0.0 20 5.0 21 32.0 22 102.0 23 333.0 24 865.0 25 2010.0 26 4316.0 27 7761.0 28 13223.0 29 20447.0 30 29429.0 31 42009.0 32 61575.0 33 98026.0 34 201075.0 35 659470.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.56125398588622 18.03518714486488 11.819089644191983 26.58446922505692 2 15.321906171263656 20.5647713544799 38.07538350133342 26.037938972923026 3 18.13230213285619 24.716900577464084 29.061513469632505 28.089283820047218 4 12.132762913349932 16.48779675281411 36.390048041519094 34.989392292316865 5 13.696917628081495 37.43679208892941 33.9230108356419 14.943279447347196 6 33.51027457306168 36.17465020864748 17.150471648490374 13.16460356980047 7 29.661167023179157 30.808991128099027 21.061033769330574 18.46880807939124 8 27.53403893645802 34.078912647642326 19.442279554546023 18.944768861353634 9 27.59846230050015 13.85516343536446 18.412592654285 40.133781609850395 10 15.533570329588443 27.22990536222291 32.39855698211131 24.837967326077333 11 36.89544832906687 20.825823193183012 23.28234035838272 18.996388119367396 12 24.82591448046113 23.552370307055035 29.81164661275122 21.810068599732617 13 30.007609536116362 19.933653261142098 25.289171139168598 24.769566063572938 14 23.072546454909194 19.9587788293959 25.727200361890667 31.241474353804232 15 24.53151424240538 28.35856617714745 22.449969008708244 24.65995057173892 16 24.779472487318902 25.90222973435004 25.00390120227164 24.31439657605942 17 23.3767577234632 26.290545990111163 26.072693481081462 24.26000280534418 18 24.05505843449384 25.238301047007965 27.420422397536903 23.286218120961287 19 25.585177262685416 24.79056352351229 25.808815794087735 23.81544341971456 20 25.551166330023005 24.827119452392978 25.78287185097907 23.838842366604947 21 26.02228495283515 24.391766314829752 24.975365571413544 24.610583160921557 22 25.493522273595175 25.124005196909206 25.42075853132961 23.961713998166005 23 24.041024975650295 24.97801732489035 26.05448898060878 24.926468718850572 24 24.688868705925255 25.137024010323707 25.89885296087583 24.275254322875206 25 24.632844142864656 25.026738905545916 25.9703154314169 24.370101520172533 26 23.904438356164384 25.85871780821918 26.410695890410956 23.826147945205477 27 24.52880641479063 25.53501885826406 25.601123605356413 24.3350511215889 28 23.893224200948072 25.53240174534666 25.924727760813514 24.649646292891756 29 24.277165260448445 25.128260427406175 25.67461653375976 24.91995777838562 30 23.85929967202537 25.487512679318662 26.199220260258084 24.45396738839789 31 24.95423445286499 25.010520815433335 25.43468502432062 24.600559707381052 32 24.252724121394685 25.652285596808117 25.361835385830624 24.73315489596657 33 23.961291329387535 25.31800603705168 26.06873612052361 24.651966513037173 34 24.565508607418266 25.36146247207718 26.223168666121943 23.849860254382612 35 24.760881953272257 25.340463770657077 25.979485381142332 23.91916889492833 36 23.954978002766968 25.752105474496712 25.82268248760738 24.47023403512894 37 24.631934246575344 25.49356712328767 25.409753424657534 24.464745205479453 38 24.33117478620564 25.911683684294513 25.563791117166502 24.193350412333352 39 25.066169398921478 25.09606507965314 25.370035760845074 24.46772976058031 40 25.49815676080848 25.219194234891358 25.643511841880322 23.63913716241984 41 24.405793594643 25.298012780555464 26.30060869389877 23.995584930902766 42 25.008613411673736 25.947541035345235 25.618434191343102 23.425411361637924 43 24.160186557023504 25.49790912358526 25.995774413283424 24.346129906107812 44 23.890691929101067 25.918454657191504 25.463281977371118 24.727571436336316 45 24.0649095045434 26.004567511057147 25.415262149710916 24.515260834688537 46 24.254057480202444 25.248472171204494 25.491925366735895 25.00554498185717 47 24.736314709304008 25.33815978307277 25.644736945923363 24.280788561699858 48 24.84265729667746 25.87688037571132 24.742364747519645 24.538097580091577 49 24.520021460958237 25.82126738881155 25.07285153715867 24.58585961307155 50 24.290370713249978 26.35539237603295 24.88747801722853 24.466758893488542 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10.0 1 15.5 2 21.0 3 61.0 4 101.0 5 137.0 6 173.0 7 173.5 8 174.0 9 248.5 10 323.0 11 494.0 12 665.0 13 1221.5 14 1778.0 15 2452.0 16 3126.0 17 3473.0 18 3820.0 19 3934.0 20 4048.0 21 4401.5 22 4755.0 23 5415.0 24 6075.0 25 6991.0 26 7907.0 27 10210.5 28 12514.0 29 14842.5 30 17171.0 31 20367.5 32 23564.0 33 28288.0 34 33012.0 35 38303.5 36 43595.0 37 47125.0 38 50655.0 39 52415.0 40 54175.0 41 56825.5 42 59476.0 43 60327.5 44 61179.0 45 66078.5 46 70978.0 47 75263.5 48 79549.0 49 81880.5 50 84212.0 51 82667.0 52 81122.0 53 79824.5 54 78527.0 55 78566.5 56 78606.0 57 75910.5 58 73215.0 59 66360.5 60 59506.0 61 51640.5 62 43775.0 63 37990.5 64 32206.0 65 27395.5 66 22585.0 67 19186.0 68 15787.0 69 13973.0 70 12159.0 71 9580.0 72 7001.0 73 5987.0 74 4973.0 75 3992.0 76 3011.0 77 2565.0 78 2119.0 79 1726.0 80 1333.0 81 1059.5 82 786.0 83 610.0 84 434.0 85 323.0 86 212.0 87 156.5 88 101.0 89 75.0 90 49.0 91 45.0 92 41.0 93 34.0 94 27.0 95 26.5 96 26.0 97 19.0 98 12.0 99 11.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00815303152505523 2 5.26002033874531E-4 3 2.630010169372655E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 8.766700564575517E-5 9 0.0013150050846863273 10 0.0013150050846863273 11 0.0 12 4.3833502822877585E-4 13 5.26002033874531E-4 14 3.506680225830207E-4 15 0.0032436792088929413 16 5.26002033874531E-4 17 0.0 18 8.766700564575517E-5 19 0.0 20 7.013360451660414E-4 21 0.0 22 1.7533401129151034E-4 23 7.890030508117964E-4 24 3.506680225830207E-4 25 0.0017533401129151034 26 0.004821685310516534 27 0.00578602237261984 28 0.004120349265350492 29 0.0028053441806641655 30 0.0037696812427674723 31 0.0073640284742434335 32 0.0032436792088929413 33 0.004997019321808044 34 0.0031560122032471857 35 0.0026300101693726547 36 0.007188694462951923 37 0.004821685310516534 38 0.008591366553284007 39 0.004120349265350492 40 0.002191675141143879 41 0.0035943472314759616 42 0.001490339095977838 43 8.766700564575517E-4 44 0.0012273380790405722 45 0.0013150050846863273 46 7.890030508117964E-4 47 0.0018410071185608584 48 0.001490339095977838 49 3.506680225830207E-4 50 0.0012273380790405722 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1140680.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.017768795495115 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85745108460841 47.328482669980936 2 12.894455243425346 15.477928670875244 3 3.786181209383621 6.817144453279028 4 1.5538169273859017 3.7302650039349476 5 0.7873675853763921 2.362802284809378 6 0.47325486573701137 1.7042220667888224 7 0.3046384662035015 1.2798604721571205 8 0.21554521798914675 1.0349234446597764 9 0.16939750450135863 0.9150174233726749 >10 0.829650399998638 8.986233006675011 >50 0.07172858753708387 3.0460682008567486 >100 0.05327519227365069 6.066246799767053 >500 0.0032377155798691804 1.2508055028432075 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.766700564575516E-5 2 0.0 0.0 0.0 0.0 8.766700564575516E-5 3 0.0 0.0 0.0 0.0 8.766700564575516E-5 4 0.0 0.0 0.0 0.0 8.766700564575516E-5 5 0.0 0.0 0.0 0.0 8.766700564575516E-5 6 0.0 0.0 0.0 0.0 1.7533401129151031E-4 7 0.0 0.0 0.0 0.0 1.7533401129151031E-4 8 0.0 0.0 0.0 0.0 1.7533401129151031E-4 9 0.0 0.0 0.0 0.0 1.7533401129151031E-4 10 0.0 0.0 0.0 0.0 1.7533401129151031E-4 11 0.0 0.0 0.0 0.0 1.7533401129151031E-4 12 0.0 0.0 0.0 0.0 5.26002033874531E-4 13 0.0 0.0 0.0 0.0 6.136690395202862E-4 14 0.0 0.0 0.0 0.0 6.136690395202862E-4 15 0.0 0.0 0.0 0.0 7.013360451660413E-4 16 0.0 0.0 0.0 0.0 7.890030508117964E-4 17 0.0 0.0 0.0 0.0 7.890030508117964E-4 18 0.0 0.0 0.0 8.766700564575516E-5 7.890030508117964E-4 19 0.0 0.0 0.0 8.766700564575516E-5 7.890030508117964E-4 20 0.0 0.0 0.0 8.766700564575516E-5 9.643370621033068E-4 21 0.0 0.0 0.0 8.766700564575516E-5 9.643370621033068E-4 22 0.0 0.0 0.0 8.766700564575516E-5 9.643370621033068E-4 23 0.0 0.0 0.0 2.630010169372655E-4 9.643370621033068E-4 24 0.0 0.0 0.0 0.001052004067749062 9.643370621033068E-4 25 0.0 0.0 0.0 0.0013150050846863276 9.643370621033068E-4 26 0.0 0.0 0.0 0.0014903390959778377 9.643370621033068E-4 27 0.0 0.0 0.0 0.0019286741242066135 9.643370621033068E-4 28 0.0 0.0 0.0 0.0029806781919556754 9.643370621033068E-4 29 0.0 0.0 0.0 0.0053476873443910646 9.643370621033068E-4 30 0.0 0.0 0.0 0.009205035592804292 9.643370621033068E-4 31 0.0 0.0 0.0 0.017796402146088297 9.643370621033068E-4 32 0.0 0.0 0.0 0.028316442823578918 9.643370621033068E-4 33 0.0 0.0 0.0 0.039274818529298317 9.643370621033068E-4 34 0.0 0.0 0.0 0.05277553739874461 0.001052004067749062 35 0.0 0.0 0.0 0.06759126135287723 0.001052004067749062 36 0.0 0.0 0.0 0.08915734474173301 0.001052004067749062 37 0.0 0.0 0.0 0.12168180383630817 0.001052004067749062 38 0.0 0.0 0.0 0.16551530665918576 0.001052004067749062 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAC 745 0.0 18.89901 1 TCCTACA 845 0.0 18.484085 2 GTATCAA 2240 0.0 18.463972 1 ATAAGAC 145 6.313712E-9 18.20499 3 ATAGTAG 135 5.531365E-8 17.924051 3 GTCCTAA 480 0.0 17.416372 1 GTGTATA 455 0.0 17.4063 1 TAATACT 215 0.0 17.39429 4 TAAGACT 165 1.6607373E-9 17.332281 4 GATATAC 395 0.0 16.708578 1 TAGGACG 725 0.0 16.68864 4 TTAGGAC 490 0.0 16.610508 3 GTTATAG 240 0.0 16.499722 1 AACGCAG 2470 0.0 16.47673 6 AGGACGT 760 0.0 16.209541 5 GTATATC 395 0.0 16.15021 3 GTATATA 165 3.11029E-8 15.999729 1 GGACGTG 770 0.0 15.999028 6 GGCGTTA 220 1.8189894E-11 15.998325 42 AATCACG 360 0.0 15.890013 34 >>END_MODULE