##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063966_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1657561 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26286393079953 32.0 32.0 32.0 32.0 32.0 2 30.863442129731574 32.0 32.0 32.0 32.0 32.0 3 30.88826353901908 32.0 32.0 32.0 32.0 32.0 4 30.915320160163034 32.0 32.0 32.0 32.0 32.0 5 30.82457779834347 32.0 32.0 32.0 32.0 32.0 6 34.48276835663967 36.0 36.0 36.0 32.0 36.0 7 34.42095464359984 36.0 36.0 36.0 32.0 36.0 8 34.38221640108569 36.0 36.0 36.0 32.0 36.0 9 34.51608115779751 36.0 36.0 36.0 32.0 36.0 10 34.21370736883892 36.0 36.0 36.0 32.0 36.0 11 34.496129554206455 36.0 36.0 36.0 32.0 36.0 12 34.31330129026926 36.0 36.0 36.0 32.0 36.0 13 34.391642901829854 36.0 36.0 36.0 32.0 36.0 14 34.291403453628554 36.0 36.0 36.0 32.0 36.0 15 34.23572888116938 36.0 36.0 36.0 32.0 36.0 16 34.22828119146143 36.0 36.0 36.0 32.0 36.0 17 34.148962240303675 36.0 36.0 36.0 32.0 36.0 18 34.15030517730569 36.0 36.0 36.0 32.0 36.0 19 34.16588047136727 36.0 36.0 36.0 32.0 36.0 20 34.13519140472055 36.0 36.0 36.0 32.0 36.0 21 34.12310316181426 36.0 36.0 36.0 32.0 36.0 22 34.10439374478526 36.0 36.0 36.0 32.0 36.0 23 34.04433924302032 36.0 36.0 36.0 32.0 36.0 24 34.034090449763234 36.0 36.0 36.0 32.0 36.0 25 33.63618774814321 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 16.0 5 24.0 6 65.0 7 28.0 8 99.0 9 114.0 10 142.0 11 49.0 12 86.0 13 84.0 14 122.0 15 257.0 16 441.0 17 580.0 18 819.0 19 1099.0 20 1583.0 21 2311.0 22 3599.0 23 5614.0 24 8555.0 25 12585.0 26 17828.0 27 23844.0 28 32916.0 29 44270.0 30 58893.0 31 79924.0 32 113053.0 33 160754.0 34 343624.0 35 744178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.28409382383739 17.134709569174408 11.511073156158812 26.070123450829392 2 16.585056833264954 19.733933441127494 37.65505466129305 26.0259550643145 3 18.53390727797603 23.951832088010207 28.736105119952214 28.77815551406154 4 12.5488615610722 15.635277217526028 36.08790163916623 35.727959582235535 5 14.61238595904813 36.671696605967504 33.51061807918263 15.205299355801735 6 33.7492864978236 35.74190348502822 17.144265614685896 13.364544402462291 7 30.337566822734725 30.431702473414223 20.8547275708235 18.376003133027556 8 28.264896041985143 32.56950802279104 19.507811561726935 19.657784373496877 9 27.83001813775641 13.926658276822604 18.420355331021597 39.822968254399385 10 15.873702865993856 26.464461350220596 31.66826931492974 25.993566468855807 11 36.940061111131236 20.949938852651186 22.908344168426236 19.20165586779134 12 24.91299452763499 23.528875554254288 28.92505606683952 22.633073851271202 13 29.509837538152457 19.48775499362516 25.287350770776186 25.715056697446197 14 23.748613763180945 19.61951459223659 25.350460589823015 31.28141105475945 15 25.122871999430156 27.30716249286189 22.260084196445497 25.30988131126245 16 25.71525507222579 25.61148030271565 23.89970974456556 24.773554880493 17 24.073012070884754 25.674957803818543 25.27659928960706 24.97543083568964 18 24.6399203042927 24.9109460846465 26.364004105536438 24.08512950552436 19 25.687184391459645 24.662566019691802 25.429988335615494 24.220261253233062 20 25.96184092395173 24.105629674263422 25.014595988472944 24.917933413311903 21 26.989609558481703 23.970223325062033 24.411560498209898 24.628606618246366 22 25.988081797269803 24.230177082515745 24.938265641886385 24.84347547832807 23 24.550884826177498 24.116638016762458 25.413521667961795 25.918955489098245 24 24.775384251267756 24.849285111814297 25.323361547281152 25.051969089636795 25 24.961736056981426 24.36623740610617 25.410880786157236 25.261145750755166 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 254.0 1 254.0 2 451.0 3 648.0 4 648.0 5 648.0 6 1621.0 7 2594.0 8 2594.0 9 2594.0 10 2744.5 11 2895.0 12 2895.0 13 2895.0 14 3560.0 15 4225.0 16 4225.0 17 4225.0 18 7369.5 19 10514.0 20 10514.0 21 10514.0 22 17179.5 23 23845.0 24 23845.0 25 23845.0 26 35483.0 27 47121.0 28 47121.0 29 47121.0 30 59777.5 31 72434.0 32 72434.0 33 72434.0 34 88620.0 35 104806.0 36 104806.0 37 104806.0 38 120128.5 39 135451.0 40 135451.0 41 135451.0 42 155375.5 43 175300.0 44 175300.0 45 175300.0 46 194706.5 47 214113.0 48 214113.0 49 214113.0 50 219400.5 51 224688.0 52 224688.0 53 224688.0 54 209064.5 55 193441.0 56 193441.0 57 193441.0 58 176763.5 59 160086.0 60 160086.0 61 160086.0 62 140919.5 63 121753.0 64 121753.0 65 121753.0 66 100264.5 67 78776.0 68 78776.0 69 78776.0 70 59551.5 71 40327.0 72 40327.0 73 40327.0 74 31190.5 75 22054.0 76 22054.0 77 22054.0 78 17336.0 79 12618.0 80 12618.0 81 12618.0 82 8659.5 83 4701.0 84 4701.0 85 4701.0 86 3566.0 87 2431.0 88 2431.0 89 2431.0 90 1783.0 91 1135.0 92 1135.0 93 1135.0 94 795.0 95 455.0 96 455.0 97 455.0 98 675.5 99 896.0 100 896.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03776633258142536 2 0.004886697985775486 3 0.0015685697238291682 4 0.004343731542911543 5 0.009170099923924369 6 0.014660093957326458 7 0.022804590600285602 8 0.03583578522902023 9 0.04802236539107761 10 0.05598587321974877 11 0.054718951519732904 12 0.06370806262936929 13 0.06328575539603068 14 0.06624190602940103 15 0.05785609096739125 16 0.06569893958653708 17 0.0611138896245749 18 0.07607563160571466 19 0.07462772109141082 20 0.07746321251525586 21 0.07426574346283485 22 0.07667892765334126 23 0.08204826247721804 24 0.07770453093430649 25 0.07854914540098373 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1657561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.16493217845163 #Duplication Level Percentage of deduplicated Percentage of total 1 74.35657193395116 36.557358161548684 2 14.558735448659121 14.315584818746906 3 4.680581505702568 6.9036141685074535 4 2.083441985305846 4.097291356212022 5 1.1180570107273338 2.7484598552025865 6 0.6809219360865223 2.0086488483908305 7 0.44688622243820014 1.5379791572360992 8 0.3056423411678873 1.202150797950588 9 0.23922752686558438 1.0585444620208653 >10 1.3350335371853326 11.960767822607508 >50 0.1004023236990015 3.391000171355486 >100 0.08082270869585642 8.318403995660614 >500 0.009979433160095223 3.2616534203849046 >1k 0.003696086355590823 2.6385429641756537 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4168 0.2514537926507682 No Hit TATCAACGCAGAGTACTTTTTTTTT 2850 0.1719393735735819 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1777 0.10720570766324737 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1679 0.10129340639650668 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8098881428798097E-4 2 0.0 6.032960476266032E-5 0.0 0.0 1.8098881428798097E-4 3 0.0 6.032960476266032E-5 0.0 0.0 1.8098881428798097E-4 4 0.0 6.032960476266032E-5 0.0 0.0 1.8098881428798097E-4 5 0.0 6.032960476266032E-5 0.0 0.0 2.4131841905064127E-4 6 0.0 6.032960476266032E-5 0.0 0.0 3.016480238133016E-4 7 0.0 6.032960476266032E-5 0.0 6.032960476266032E-5 3.016480238133016E-4 8 0.0 6.032960476266032E-5 0.0 6.032960476266032E-5 3.016480238133016E-4 9 0.0 6.032960476266032E-5 0.0 1.8098881428798097E-4 3.016480238133016E-4 10 0.0 6.032960476266032E-5 0.0 1.8098881428798097E-4 3.016480238133016E-4 11 0.0 6.032960476266032E-5 0.0 1.8098881428798097E-4 3.016480238133016E-4 12 0.0 6.032960476266032E-5 0.0 1.8098881428798097E-4 4.8263683810128254E-4 13 0.0 6.032960476266032E-5 0.0 1.8098881428798097E-4 5.429664428639429E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACA 25 0.006043374 18.993935 2 GGTCCAA 335 0.0 12.194921 11 GACGTGG 150 1.4551915E-11 12.033485 7 GCGCGCT 80 2.8653696E-5 11.875509 15 CAAGACG 290 0.0 11.791474 4 AATAGCG 245 0.0 11.631397 5 CGCAAGA 290 0.0 11.461858 2 CGCCGGT 315 0.0 11.460464 7 TCCAACG 100 1.9272447E-6 11.401177 18 AAGACGG 300 0.0 11.398768 5 ATAGTCC 75 2.0783838E-4 11.397392 3 ACGGTAT 220 0.0 11.228433 9 GCCGTTA 110 4.9655864E-7 11.227755 15 CCGTCGT 255 0.0 11.177624 9 CGGAATT 85 5.3207936E-5 11.17695 15 ATAGCGT 240 0.0 11.082806 6 TTAGATA 60 0.0058819833 11.081801 4 GTATCAA 2735 0.0 10.976374 1 AGCGTAT 245 0.0 10.857936 8 GGTTCTA 350 0.0 10.857608 13 >>END_MODULE