##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063966_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1657561 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332579012175117 32.0 32.0 32.0 32.0 32.0 2 31.416922212817507 32.0 32.0 32.0 32.0 32.0 3 31.489081849778078 32.0 32.0 32.0 32.0 32.0 4 31.572249226423644 32.0 32.0 32.0 32.0 32.0 5 31.522709571472785 32.0 32.0 32.0 32.0 32.0 6 35.111627264396304 36.0 36.0 36.0 36.0 36.0 7 35.13012914758492 36.0 36.0 36.0 36.0 36.0 8 35.07891655269399 36.0 36.0 36.0 36.0 36.0 9 35.188536651139835 36.0 36.0 36.0 36.0 36.0 10 35.0437576656304 36.0 36.0 36.0 36.0 36.0 11 35.18550508850051 36.0 36.0 36.0 36.0 36.0 12 35.09219208222201 36.0 36.0 36.0 36.0 36.0 13 35.13442039237168 36.0 36.0 36.0 36.0 36.0 14 35.0845688333642 36.0 36.0 36.0 36.0 36.0 15 35.05256518462971 36.0 36.0 36.0 36.0 36.0 16 35.068343789459334 36.0 36.0 36.0 36.0 36.0 17 35.02554174476837 36.0 36.0 36.0 36.0 36.0 18 35.02720563526772 36.0 36.0 36.0 36.0 36.0 19 35.024232592345015 36.0 36.0 36.0 36.0 36.0 20 35.015773778461245 36.0 36.0 36.0 36.0 36.0 21 35.009901898029696 36.0 36.0 36.0 36.0 36.0 22 34.990016053707826 36.0 36.0 36.0 36.0 36.0 23 34.93938986257519 36.0 36.0 36.0 36.0 36.0 24 34.912964289097054 36.0 36.0 36.0 32.0 36.0 25 34.88324049612654 36.0 36.0 36.0 32.0 36.0 26 34.83145175351013 36.0 36.0 36.0 32.0 36.0 27 34.826151797731725 36.0 36.0 36.0 32.0 36.0 28 34.8022787698311 36.0 36.0 36.0 32.0 36.0 29 34.779297413488855 36.0 36.0 36.0 32.0 36.0 30 34.75407662221782 36.0 36.0 36.0 32.0 36.0 31 34.74676829389688 36.0 36.0 36.0 32.0 36.0 32 34.7127128353044 36.0 36.0 36.0 32.0 36.0 33 34.68705827417513 36.0 36.0 36.0 32.0 36.0 34 34.67519204421436 36.0 36.0 36.0 32.0 36.0 35 34.63846157094671 36.0 36.0 36.0 32.0 36.0 36 34.607243413666225 36.0 36.0 36.0 32.0 36.0 37 34.597545429700624 36.0 36.0 36.0 32.0 36.0 38 34.56194734311437 36.0 36.0 36.0 32.0 36.0 39 34.558051860534846 36.0 36.0 36.0 32.0 36.0 40 34.53955299382647 36.0 36.0 36.0 32.0 36.0 41 34.51578674932627 36.0 36.0 36.0 32.0 36.0 42 34.45878914863465 36.0 36.0 36.0 32.0 36.0 43 34.434303775245674 36.0 36.0 36.0 32.0 36.0 44 34.389807675252975 36.0 36.0 36.0 32.0 36.0 45 34.35117199306692 36.0 36.0 36.0 32.0 36.0 46 34.31526622549638 36.0 36.0 36.0 32.0 36.0 47 34.28809558139942 36.0 36.0 36.0 32.0 36.0 48 34.243334031145764 36.0 36.0 36.0 32.0 36.0 49 34.22092459945667 36.0 36.0 36.0 32.0 36.0 50 33.61806956124089 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 7.0 20 18.0 21 49.0 22 183.0 23 520.0 24 1371.0 25 2948.0 26 6041.0 27 11042.0 28 18471.0 29 28400.0 30 40543.0 31 57917.0 32 84321.0 33 137160.0 34 286715.0 35 981852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.46331880469357 18.042482997630046 12.023897440352934 26.47030075732345 2 15.844742219404145 20.555481483849988 37.185899938041196 26.41387635870467 3 17.818512425213733 24.532550011854795 29.03399400442941 28.61494355850206 4 12.176082810828682 16.27143737093235 36.17990529458645 35.372574523652524 5 14.201890609154052 37.09619133172173 33.37494065075132 15.326977408372905 6 33.78940586091105 36.06703355176712 16.894612435884596 13.248948151437235 7 30.163173482001564 30.69407400391298 20.877663024166228 18.265089489919227 8 28.23497898418218 32.815262907368115 19.336181292875494 19.613576815574206 9 27.738509505630017 13.858395312582955 18.321745908404242 40.08134927338279 10 15.75199285209668 26.65357102565294 31.757975179014313 25.836460943236066 11 37.164446535872 20.96123217259104 22.728468351070248 19.14585294046671 12 24.776040884265214 23.671644474368 28.88678941357673 22.665525227790052 13 29.52916682503283 19.543531390587678 25.366278322657948 25.56102346172154 14 23.74419251441427 19.54506596748592 25.3344828147897 31.376258703310107 15 25.167105584665922 27.337441967800615 22.2383912976588 25.25706114987466 16 25.74566243130687 25.66771620575632 23.83736749292481 24.749253870012 17 24.10927863288289 25.77847813745618 25.17011440302951 24.942128826631418 18 24.699089924617887 24.914648382708265 26.318101058486747 24.068160634187098 19 25.681287144183536 24.618460497079745 25.427239178527973 24.273013180208753 20 26.091956033985035 24.034706582534614 25.04022495811597 24.83311242536438 21 27.02392249817654 24.04864738009642 24.383114708900607 24.544315412826435 22 26.004052952628477 24.23476236412986 25.046438825331496 24.714745857910163 23 24.528234727015942 24.087886285248537 25.411827449049834 25.972051538685687 24 24.8024952414852 24.76309986697274 25.47565540811617 24.95874948342589 25 24.99665162815335 24.221458297386096 25.561108691166694 25.220781383293854 26 24.62576932150082 25.008039375746243 25.717435098255347 24.648756204497584 27 25.29289180047761 24.62788955001635 24.928473945933423 25.150744703572624 28 24.574444850683143 24.598095182934113 25.760400414604806 25.067059551777938 29 24.682702337779553 24.636367859558266 25.44770387924559 25.23322592341659 30 24.589606109950388 24.89446410935069 25.728555113053268 24.787374667645658 31 25.318205403579057 24.500187037685077 24.836794536086206 25.34481302264966 32 24.99862745015231 24.8125036576191 24.779441797551613 25.40942709467698 33 24.603390554496055 24.461549321352145 25.27899163010027 25.65606849405154 34 25.165489397336245 24.62859907765151 25.403979950624674 24.801931574387577 35 25.730990623893295 24.355856461887733 25.358926728088075 24.554226186130894 36 24.72873502190151 24.989682759952213 25.080788213005757 25.20079400514052 37 25.660365975058674 24.748806930961877 24.797253678755226 24.793573415224223 38 24.82786374869676 24.698203459860217 25.225351874734525 25.2485809167085 39 25.507925600174243 24.53475975835562 24.717145396286043 25.240169245184095 40 25.651472234037097 24.73117890335834 25.176906393003982 24.440442469600576 41 24.774584266720883 25.00607845704326 25.44831260222517 24.77102467401069 42 25.838238239687634 25.081265791626546 25.037706844667106 24.042789124018718 43 25.10984698343864 24.345819962558814 25.275092562259694 25.26924049174285 44 24.678469685836017 24.876835700090858 24.930770984988616 25.513923629084513 45 24.89117876847246 25.097328261545005 24.86342671497133 25.14806625501121 46 24.726069628569604 24.81614297832086 24.99321282528666 25.46457456782288 47 25.078777282459768 24.71437767605961 25.27201766976105 24.934827371719575 48 25.627171162735696 25.13016418484943 24.400158791255862 24.842505861159005 49 24.910228844051574 25.245422756988035 24.7165692939209 25.127779105039494 50 24.913199629088666 25.52036483002813 24.508684260219518 25.05775128066368 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 93.0 1 75.0 2 57.0 3 157.5 4 258.0 5 281.0 6 304.0 7 277.0 8 250.0 9 364.5 10 479.0 11 694.5 12 910.0 13 1747.5 14 2585.0 15 3359.0 16 4133.0 17 4463.5 18 4794.0 19 4751.0 20 4708.0 21 5210.0 22 5712.0 23 6418.5 24 7125.0 25 8319.5 26 9514.0 27 12091.5 28 14669.0 29 17468.0 30 20267.0 31 23370.0 32 26473.0 33 30925.5 34 35378.0 35 41272.0 36 47166.0 37 54734.5 38 62303.0 39 67479.0 40 72655.0 41 78691.5 42 84728.0 43 87157.5 44 89587.0 45 97974.5 46 106362.0 47 113009.5 48 119657.0 49 124181.0 50 128705.0 51 125189.0 52 121673.0 53 120477.0 54 119281.0 55 119300.0 56 119319.0 57 115827.0 58 112335.0 59 102555.5 60 92776.0 61 81877.0 62 70978.0 63 61863.5 64 52749.0 65 44734.0 66 36719.0 67 32287.0 68 27855.0 69 24877.0 70 21899.0 71 16978.5 72 12058.0 73 10074.0 74 8090.0 75 6368.5 76 4647.0 77 4030.5 78 3414.0 79 2784.5 80 2155.0 81 1680.5 82 1206.0 83 1012.5 84 819.0 85 566.5 86 314.0 87 230.0 88 146.0 89 112.5 90 79.0 91 66.0 92 53.0 93 46.5 94 40.0 95 43.5 96 47.0 97 34.5 98 22.0 99 18.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008747792690585746 2 4.8263683810128254E-4 3 2.4131841905064127E-4 4 0.0 5 0.0 6 1.8098881428798094E-4 7 0.0 8 0.0 9 0.0010256032809652254 10 7.239552571519238E-4 11 6.032960476266032E-5 12 2.4131841905064127E-4 13 6.032960476266032E-4 14 1.2065920952532063E-4 15 0.004585049961962184 16 4.8263683810128254E-4 17 0.0 18 3.619776285759619E-4 19 0.0 20 4.8263683810128254E-4 21 0.0 22 2.4131841905064127E-4 23 6.032960476266032E-4 24 3.619776285759619E-4 25 0.0023528545857437523 26 0.00567098284769007 27 0.007420541385807219 28 0.004766038776250165 29 0.002895821028607695 30 0.004102413123860902 31 0.008506474271535105 32 0.0037404354952849397 33 0.004464390752436863 34 0.0031974690524209973 35 0.0030164802381330157 36 0.008506474271535105 37 0.004283401938148883 38 0.009230429528687028 39 0.005067686800063467 40 0.002775161819082375 41 0.004102413123860902 42 0.0022321953762184316 43 0.0016892289333544888 44 0.001146262490490546 45 0.0015685697238291682 46 0.0013875809095411874 47 0.002413184190506413 48 0.0023528545857437523 49 7.842848619145841E-4 50 0.001327251304778527 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1657561.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.50846008897426 #Duplication Level Percentage of deduplicated Percentage of total 1 75.37726248169703 39.57943978636326 2 14.148884995356259 14.85872326164302 3 4.634356238770371 7.3002872880468885 4 1.9642628042469004 4.125616602442202 5 1.0216738889842514 2.6823261311838342 6 0.6263369797756078 1.973279418287771 7 0.39267547404345177 1.4433149119710746 8 0.28549694503406964 1.199280395507642 9 0.21403461759821046 1.0114765358233053 >10 1.1743159599254251 11.205428173378287 >50 0.08476892123603007 3.0703242192153444 >100 0.06609238654005738 7.25894138218545 >500 0.007523411076503741 2.7251870806339222 >1k 0.002314895715847305 1.5663748133179767 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1736 0.10473219386797832 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1667 0.10056945113935474 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 6.032960476266032E-5 3 0.0 0.0 0.0 0.0 6.032960476266032E-5 4 0.0 0.0 0.0 0.0 6.032960476266032E-5 5 0.0 0.0 0.0 0.0 6.032960476266032E-5 6 0.0 0.0 0.0 0.0 1.2065920952532063E-4 7 0.0 0.0 0.0 6.032960476266032E-5 1.2065920952532063E-4 8 0.0 0.0 0.0 6.032960476266032E-5 1.2065920952532063E-4 9 0.0 0.0 0.0 1.2065920952532063E-4 1.2065920952532063E-4 10 0.0 0.0 0.0 1.2065920952532063E-4 1.2065920952532063E-4 11 0.0 0.0 0.0 1.2065920952532063E-4 1.2065920952532063E-4 12 0.0 0.0 0.0 1.2065920952532063E-4 2.4131841905064127E-4 13 0.0 0.0 0.0 1.8098881428798097E-4 2.4131841905064127E-4 14 0.0 0.0 0.0 1.8098881428798097E-4 2.4131841905064127E-4 15 0.0 0.0 0.0 1.8098881428798097E-4 2.4131841905064127E-4 16 0.0 0.0 0.0 1.8098881428798097E-4 2.4131841905064127E-4 17 0.0 0.0 0.0 1.8098881428798097E-4 3.016480238133016E-4 18 0.0 0.0 0.0 3.016480238133016E-4 4.223072333386222E-4 19 0.0 0.0 0.0 3.6197762857596193E-4 4.223072333386222E-4 20 0.0 0.0 0.0 3.6197762857596193E-4 4.8263683810128254E-4 21 0.0 0.0 0.0 4.8263683810128254E-4 6.032960476266032E-4 22 0.0 0.0 0.0 5.429664428639429E-4 6.636256523892635E-4 23 0.0 0.0 0.0 0.0015685697238291682 6.636256523892635E-4 24 0.0 0.0 0.0 0.0025338434000317335 6.636256523892635E-4 25 0.0 0.0 0.0 0.0028958210286076955 6.636256523892635E-4 26 0.0 0.0 0.0 0.003438787471471638 7.842848619145841E-4 27 0.0 0.0 0.0 0.003981753914335581 7.842848619145841E-4 28 0.0 0.0 0.0 0.006032960476266032 7.842848619145841E-4 29 0.0 0.0 0.0 0.009652736762025651 7.842848619145841E-4 30 0.0 6.032960476266032E-5 0.0 0.01665097091449425 7.842848619145841E-4 31 0.0 6.032960476266032E-5 0.0 0.038852265467153244 7.842848619145841E-4 32 0.0 6.032960476266032E-5 0.0 0.06045026397218564 7.842848619145841E-4 33 0.0 6.032960476266032E-5 0.0 0.08066068156767685 7.842848619145841E-4 34 0.0 6.032960476266032E-5 0.0 0.1035256017727251 7.842848619145841E-4 35 0.0 6.032960476266032E-5 0.0 0.1345350186207325 7.842848619145841E-4 36 0.0 6.032960476266032E-5 0.0 0.17839464128318655 7.842848619145841E-4 37 0.0 6.032960476266032E-5 0.0 0.23999116774586274 7.842848619145841E-4 38 0.0 6.032960476266032E-5 0.0 0.32390964797072325 8.446144666772444E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3335 0.0 21.571718 1 TAGGACG 485 0.0 20.864578 4 GTATAAT 185 1.8189894E-12 19.02747 1 ATGCGTA 110 2.7978804E-6 17.999876 22 CGTCGTA 405 0.0 17.925262 10 AACGCAG 4105 0.0 17.309435 6 CCGTCGT 395 0.0 17.265184 9 CTATTCC 515 0.0 17.08623 4 TCGATCG 130 7.3236697E-7 16.92245 41 GGTATCA 1725 0.0 16.835176 1 ATACCGT 420 0.0 16.760778 6 AATCGTA 145 1.2505734E-7 16.689037 13 CGAGCCG 650 0.0 16.584002 15 GTATTAC 160 2.1300366E-8 16.500385 1 TGCGTAT 120 6.4098385E-6 16.499886 23 TACCGTC 415 0.0 16.43263 7 AGGACGT 590 0.0 16.405678 5 GGACGTG 590 0.0 16.405678 6 TACGACG 405 0.0 16.295202 5 TATGGCG 505 0.0 16.11773 16 >>END_MODULE