##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063961_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2578507 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23780311629947 32.0 32.0 32.0 32.0 32.0 2 30.842810199855965 32.0 32.0 32.0 32.0 32.0 3 30.86636918185601 32.0 32.0 32.0 32.0 32.0 4 30.885999146017443 32.0 32.0 32.0 32.0 32.0 5 30.803744182195356 32.0 32.0 32.0 32.0 32.0 6 34.452978797420364 36.0 36.0 36.0 32.0 36.0 7 34.38681221342428 36.0 36.0 36.0 32.0 36.0 8 34.35023096698981 36.0 36.0 36.0 32.0 36.0 9 34.47941114761372 36.0 36.0 36.0 32.0 36.0 10 34.18785754702237 36.0 36.0 36.0 32.0 36.0 11 34.45382502355045 36.0 36.0 36.0 32.0 36.0 12 34.270394844768695 36.0 36.0 36.0 32.0 36.0 13 34.35484836767944 36.0 36.0 36.0 32.0 36.0 14 34.25686531004182 36.0 36.0 36.0 32.0 36.0 15 34.192398546911065 36.0 36.0 36.0 32.0 36.0 16 34.191217630977924 36.0 36.0 36.0 32.0 36.0 17 34.11708442133374 36.0 36.0 36.0 32.0 36.0 18 34.106852531329174 36.0 36.0 36.0 32.0 36.0 19 34.12521548322343 36.0 36.0 36.0 32.0 36.0 20 34.104544218805685 36.0 36.0 36.0 32.0 36.0 21 34.095896191090425 36.0 36.0 36.0 32.0 36.0 22 34.06822087355202 36.0 36.0 36.0 32.0 36.0 23 34.01001858827608 36.0 36.0 36.0 32.0 36.0 24 33.994539863572214 36.0 36.0 36.0 32.0 36.0 25 33.60681277964341 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 7.0 4 22.0 5 27.0 6 119.0 7 34.0 8 139.0 9 167.0 10 240.0 11 72.0 12 142.0 13 150.0 14 259.0 15 442.0 16 786.0 17 1024.0 18 1331.0 19 1892.0 20 2866.0 21 4301.0 22 6540.0 23 10051.0 24 14486.0 25 21136.0 26 29589.0 27 38928.0 28 52181.0 29 69774.0 30 92072.0 31 123691.0 32 172108.0 33 240774.0 34 518355.0 35 1174800.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.31068317125548 17.250088749992727 11.57129194770831 25.867936131043486 2 16.847518341144514 19.628282518007598 37.45118982793687 26.073009312911015 3 18.555581927845417 23.706788227409806 28.634489370415878 29.103140474328903 4 12.543500493907315 15.487436293325482 35.84762600647917 36.121437206288036 5 14.726985219141383 36.431098873778396 33.46914807504421 15.372767832036017 6 34.130453754719944 35.609806237406204 16.92892785732433 13.33081215054952 7 30.501074704053927 30.471477187607526 20.572213479166724 18.455234629171823 8 28.40471666124816 32.44846146743504 19.231288500170315 19.91553337114649 9 27.46667659976184 14.158540735196487 18.566972536155884 39.80781012888579 10 16.022921208442988 26.407003176559428 31.121978174638592 26.448097440358993 11 37.04258591841359 21.08807743289346 22.58592617426747 19.283410474425477 12 24.919601607385747 23.678980773074155 28.581390881520303 22.820026738019795 13 29.342628902285927 19.424802714937396 25.351329430643165 25.88123895213351 14 23.863933159549404 19.78788891333817 25.074211326381203 31.273966600731228 15 25.20661076847913 27.363310149568466 22.135146745354096 25.294932336598308 16 25.8699557469063 25.725744139268986 23.77011676250374 24.634183351320978 17 24.105386849462214 25.93202290532538 25.143662772016263 24.818927473196144 18 24.865688951058072 24.981505789677552 26.120927683562318 24.03187757570206 19 25.679208031462018 24.741565035956757 25.408964719333905 24.17026221324732 20 26.03527811254917 24.097873570914285 24.76749398867017 25.09935432786637 21 27.15428878371843 23.969303233228207 24.30618678096903 24.57022120208433 22 26.2210786937434 24.099888566780947 24.865482522140123 24.813550217335532 23 24.528088038479574 24.071430345825533 25.46407134495297 25.936410270741924 24 24.72719467830222 24.84274032193648 25.328792755672392 25.10127224408891 25 24.882376731357848 24.439790315807123 25.292088403948693 25.385744548886336 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 166.0 1 166.0 2 462.5 3 759.0 4 759.0 5 759.0 6 2095.0 7 3431.0 8 3431.0 9 3431.0 10 3791.5 11 4152.0 12 4152.0 13 4152.0 14 5217.0 15 6282.0 16 6282.0 17 6282.0 18 11001.5 19 15721.0 20 15721.0 21 15721.0 22 25727.0 23 35733.0 24 35733.0 25 35733.0 26 53876.0 27 72019.0 28 72019.0 29 72019.0 30 91246.0 31 110473.0 32 110473.0 33 110473.0 34 138057.5 35 165642.0 36 165642.0 37 165642.0 38 188755.5 39 211869.0 40 211869.0 41 211869.0 42 242916.5 43 273964.0 44 273964.0 45 273964.0 46 303754.5 47 333545.0 48 333545.0 49 333545.0 50 341228.0 51 348911.0 52 348911.0 53 348911.0 54 322139.0 55 295367.0 56 295367.0 57 295367.0 58 270532.5 59 245698.0 60 245698.0 61 245698.0 62 217512.0 63 189326.0 64 189326.0 65 189326.0 66 157210.0 67 125094.0 68 125094.0 69 125094.0 70 95251.0 71 65408.0 72 65408.0 73 65408.0 74 50674.5 75 35941.0 76 35941.0 77 35941.0 78 28883.0 79 21825.0 80 21825.0 81 21825.0 82 15164.0 83 8503.0 84 8503.0 85 8503.0 86 6570.5 87 4638.0 88 4638.0 89 4638.0 90 3256.5 91 1875.0 92 1875.0 93 1875.0 94 1317.0 95 759.0 96 759.0 97 759.0 98 1082.5 99 1406.0 100 1406.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04041098201401043 2 0.0058561020001109175 3 0.0016676316953958242 4 0.0034128276556937794 5 0.00930771178825576 6 0.013651310622775118 7 0.022803893881226618 8 0.03571834398743149 9 0.04902061541814701 10 0.05836710933885385 11 0.05472158888845367 12 0.0640680828091605 13 0.0640680828091605 14 0.06763603899465855 15 0.06050012662366245 16 0.06740334619995214 17 0.06356391508729664 18 0.07853381821340799 19 0.07523733695506742 20 0.08229568506116136 21 0.075586376147127 22 0.08051170696841234 23 0.08450626661087211 24 0.07896042167036972 25 0.07992997498164635 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2578507.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.32103647435323 #Duplication Level Percentage of deduplicated Percentage of total 1 72.37502958505569 32.07736326071647 2 14.992622318157265 13.289771212185006 3 5.413890487451992 7.198477132875411 4 2.383960950011264 4.22638480875532 5 1.280899784650901 2.838540303775189 6 0.7568780460136338 2.012737169040448 7 0.48119544616067667 1.4928956644406017 8 0.3549103862577235 1.2583996939564284 9 0.2689792339030701 1.0729294592995402 >10 1.4619898374747615 12.010324452264108 >50 0.11652212005048661 3.5961295288467197 >100 0.08940143078202555 8.227861915346521 >500 0.01590143592430893 4.775368617058604 >1k 0.007731084869276522 5.686855741833751 >5k 8.785323715086957E-5 0.23596103960611386 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6060 0.23501972265345797 No Hit TATCAACGCAGAGTACTTTTTTTTT 4216 0.16350547041369287 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3139 0.12173711376389515 No Hit CTATTGGAGCTGGAATTACCGCGGC 2913 0.1129723518299543 No Hit GTATCTGATCGTCTTCGAACCTCCG 2853 0.11064542388289036 No Hit GAATAGGACCGCGGTTCTATTTTGT 2847 0.11041273108818397 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2712 0.1051771432072901 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2687 0.10420758989601346 No Hit GAACTACGACGGTATCTGATCGTCT 2674 0.10370342217414961 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2663 0.1032768187171879 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 2 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 3 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 4 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 5 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 6 0.0 0.0 0.0 3.8782132451065675E-5 1.1634639735319702E-4 7 0.0 0.0 0.0 7.756426490213135E-5 1.1634639735319702E-4 8 0.0 0.0 0.0 7.756426490213135E-5 1.1634639735319702E-4 9 0.0 0.0 0.0 7.756426490213135E-5 1.1634639735319702E-4 10 0.0 0.0 0.0 7.756426490213135E-5 1.551285298042627E-4 11 0.0 0.0 0.0 7.756426490213135E-5 1.551285298042627E-4 12 0.0 0.0 0.0 7.756426490213135E-5 4.2660345696172243E-4 13 0.0 0.0 0.0 7.756426490213135E-5 4.6538558941278807E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 70 7.2745006E-6 13.570069 6 CGAACGA 200 0.0 13.301766 16 GTATCAA 4055 0.0 12.04025 1 GTCTAAA 145 9.822543E-11 11.791466 1 CGACCAT 485 0.0 11.7525425 10 CGTCGTA 525 0.0 11.580916 10 ACGAACG 230 0.0 11.566753 15 CCGTCGT 530 0.0 11.471441 9 AGGCCCG 630 0.0 11.460283 10 CGAGCCG 615 0.0 11.432413 15 CGCATCG 275 0.0 11.401071 13 GTATTAG 425 0.0 11.3984165 1 ACCGTCG 555 0.0 11.125876 8 TCGAACG 215 0.0 11.04412 3 CGCTTAC 95 1.3584593E-5 11.001888 18 CGACGCT 95 1.3590439E-5 11.001462 15 CCGACCA 540 0.0 10.907162 9 GTTCAAA 795 0.0 10.872704 1 GTACGCC 140 8.378265E-9 10.855635 4 TCCATTA 570 0.0 10.83309 8 >>END_MODULE