##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063961_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2578507 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34682356883266 32.0 32.0 32.0 32.0 32.0 2 31.425837897667137 32.0 32.0 32.0 32.0 32.0 3 31.485942834361126 32.0 32.0 32.0 32.0 32.0 4 31.570051584114374 32.0 32.0 32.0 32.0 32.0 5 31.521728659259022 32.0 32.0 32.0 32.0 32.0 6 35.10562624030107 36.0 36.0 36.0 36.0 36.0 7 35.11688740810089 36.0 36.0 36.0 36.0 36.0 8 35.070846036097635 36.0 36.0 36.0 36.0 36.0 9 35.17772106106363 36.0 36.0 36.0 36.0 36.0 10 35.029052083240416 36.0 36.0 36.0 36.0 36.0 11 35.17287213104328 36.0 36.0 36.0 36.0 36.0 12 35.071267985698704 36.0 36.0 36.0 36.0 36.0 13 35.11785308319892 36.0 36.0 36.0 36.0 36.0 14 35.05781446395142 36.0 36.0 36.0 36.0 36.0 15 35.03230125029717 36.0 36.0 36.0 36.0 36.0 16 35.043861816159506 36.0 36.0 36.0 36.0 36.0 17 35.00758462164345 36.0 36.0 36.0 36.0 36.0 18 35.009356965096465 36.0 36.0 36.0 36.0 36.0 19 35.00696643445219 36.0 36.0 36.0 36.0 36.0 20 34.996620912799536 36.0 36.0 36.0 36.0 36.0 21 34.98789299389143 36.0 36.0 36.0 36.0 36.0 22 34.98053369643751 36.0 36.0 36.0 36.0 36.0 23 34.92303065300967 36.0 36.0 36.0 32.0 36.0 24 34.892450941572 36.0 36.0 36.0 32.0 36.0 25 34.86965907015183 36.0 36.0 36.0 32.0 36.0 26 34.81380892120906 36.0 36.0 36.0 32.0 36.0 27 34.80981164681732 36.0 36.0 36.0 32.0 36.0 28 34.7837388069918 36.0 36.0 36.0 32.0 36.0 29 34.75280617814883 36.0 36.0 36.0 32.0 36.0 30 34.73366409321363 36.0 36.0 36.0 32.0 36.0 31 34.731090898725505 36.0 36.0 36.0 32.0 36.0 32 34.692609715622254 36.0 36.0 36.0 32.0 36.0 33 34.66794234027676 36.0 36.0 36.0 32.0 36.0 34 34.65960689654905 36.0 36.0 36.0 32.0 36.0 35 34.625499562343634 36.0 36.0 36.0 32.0 36.0 36 34.60027217300554 36.0 36.0 36.0 32.0 36.0 37 34.58957761216084 36.0 36.0 36.0 32.0 36.0 38 34.549295386826564 36.0 36.0 36.0 32.0 36.0 39 34.55736672423228 36.0 36.0 36.0 32.0 36.0 40 34.52680485257554 36.0 36.0 36.0 32.0 36.0 41 34.510444222179736 36.0 36.0 36.0 32.0 36.0 42 34.440502973232185 36.0 36.0 36.0 32.0 36.0 43 34.44154000745392 36.0 36.0 36.0 32.0 36.0 44 34.36786830518591 36.0 36.0 36.0 32.0 36.0 45 34.34342896877922 36.0 36.0 36.0 32.0 36.0 46 34.316814342563355 36.0 36.0 36.0 32.0 36.0 47 34.284930388011354 36.0 36.0 36.0 32.0 36.0 48 34.23845814651657 36.0 36.0 36.0 32.0 36.0 49 34.22529083690679 36.0 36.0 36.0 32.0 36.0 50 33.625544937438605 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 4.0 19 12.0 20 33.0 21 90.0 22 284.0 23 844.0 24 2191.0 25 4897.0 26 9797.0 27 17879.0 28 29273.0 29 45578.0 30 65196.0 31 91863.0 32 131968.0 33 209981.0 34 438550.0 35 1530064.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.34461352886534 18.13645998374876 12.122066583535828 26.396859903850068 2 16.084376318598128 20.35899997517933 36.93261498175681 26.624008724465735 3 17.815946409131826 24.240808315225255 28.954791140116786 28.988454135526133 4 12.10433014143456 16.114208726212496 35.94250471299865 35.838956419354304 5 14.243979170892304 36.93199204035514 33.204059558496446 15.619969230256114 6 34.165714564945745 35.98296843210759 16.626914965487767 13.224402037458901 7 30.34016248963061 30.60803109401075 20.58578175010849 18.466024666250146 8 28.408067148935412 32.65816226211525 19.088798285209233 19.84497230374011 9 27.525262025034174 13.925944599036253 18.446058232094554 40.10273514383502 10 15.973869937630067 26.67348203558212 31.082270758887194 26.270377267900617 11 37.26937226440427 20.974393699297188 22.50931353272011 19.24692050357843 12 24.836678364677773 23.779785231807164 28.512651342776284 22.87088506073878 13 29.38568935427574 19.31929416327322 25.447779716889663 25.84723676556137 14 23.894338650891097 19.68418097019122 25.033915040593335 31.387565338324347 15 25.299353472515797 27.39837650626942 21.985851636098495 25.316418385116297 16 25.91684652034043 25.743294996868315 23.704074291686787 24.635784191104467 17 24.14389412167584 25.957230288690315 25.066521052686692 24.832354536947157 18 24.883711189554834 24.95662196615544 26.115088885217496 24.04457795907223 19 25.72412086688959 24.71628920002513 25.368682485128986 24.1909074479563 20 26.184133420774724 24.00126585763988 24.81049948244883 25.00410123913656 21 27.21446945848896 23.91798820014838 24.341450304381567 24.52609203698109 22 26.194046000352145 24.05796078498291 24.95421760386457 24.793775610800378 23 24.611371534746485 23.94660287741939 25.53055255961723 25.911473028216893 24 24.867665155321102 24.764969670315693 25.292059676625566 25.075305497737638 25 25.003703764032615 24.270552399922746 25.422132142544108 25.30361169350053 26 24.677934311631134 25.2740505965817 25.67329724832413 24.374717843463046 27 25.42791885201045 24.62170588876379 24.88854310371241 25.061832155513347 28 24.527147152178568 24.630118306293227 25.79216038523235 25.050574156295863 29 24.58536880496549 24.66246980727852 25.587216436630577 25.164944951125413 30 24.609370758034814 24.92297560816691 25.73859643407317 24.7290571997251 31 25.32305263749881 24.589660996899113 24.763186524427965 25.324099841174107 32 25.111812313549187 24.708426995052797 24.580752303341416 25.5990083880566 33 24.649958695475117 24.385532169049917 25.249746937065865 25.714762198409097 34 25.289033818411134 24.57433201288542 25.344532965562607 24.79210120314084 35 25.843594745639788 24.369403086374266 25.32017545560671 24.466826712379238 36 24.613670309502027 25.016803688317466 25.0097447817421 25.359781220438403 37 25.752017921219238 24.817871265701623 24.74022609405227 24.689884719026868 38 24.90408334238329 24.51805079355229 25.303652047101167 25.274213816963247 39 25.55537413361868 24.50937539874581 24.585663107737094 25.34958735989842 40 25.687186366687882 24.751585158364584 25.21279265170651 24.348435823241026 41 24.69667329608037 25.19527553436074 25.44352949571984 24.66452167383905 42 26.043121829990124 25.087978802867756 24.9232682118255 23.94563115531662 43 25.170779305899536 24.315583558337217 25.20285253991314 25.310784595850105 44 24.85142363384206 24.931781303035287 24.6535545082514 25.563240554871257 45 24.93757926212056 25.298490965572608 24.74067955027594 25.023250222030896 46 24.800036921033975 24.806552397617818 24.82671934894876 25.56669133239945 47 25.025170140844192 24.710174942174607 25.263801691867833 25.00085322511336 48 25.85796533195266 25.16774580126471 24.26433658915901 24.709952277623614 49 25.011654071478823 25.259821803235837 24.53098664416261 25.197537481122733 50 25.049612812574296 25.509265776913182 24.44731695228211 24.993804458230414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 26.0 2 33.0 3 142.5 4 252.0 5 293.0 6 334.0 7 308.0 8 282.0 9 421.5 10 561.0 11 864.5 12 1168.0 13 2194.5 14 3221.0 15 4432.5 16 5644.0 17 6155.0 18 6666.0 19 6778.0 20 6890.0 21 7564.5 22 8239.0 23 9512.0 24 10785.0 25 12741.5 26 14698.0 27 18256.5 28 21815.0 29 26069.5 30 30324.0 31 35006.0 32 39688.0 33 46615.0 34 53542.0 35 61833.0 36 70124.0 37 82694.0 38 95264.0 39 105237.0 40 115210.0 41 125430.0 42 135650.0 43 138563.5 44 141477.0 45 155062.0 46 168647.0 47 179843.5 48 191040.0 49 197189.5 50 203339.0 51 195943.5 52 188548.0 53 185596.0 54 182644.0 55 182945.5 56 183247.0 57 179194.0 58 175141.0 59 158885.5 60 142630.0 61 125294.5 62 107959.0 63 94240.0 64 80521.0 65 68404.0 66 56287.0 67 50267.0 68 44247.0 69 40339.5 70 36432.0 71 28239.0 72 20046.0 73 16983.0 74 13920.0 75 10849.0 76 7778.0 77 6738.5 78 5699.0 79 4763.5 80 3828.0 81 2945.0 82 2062.0 83 1670.0 84 1278.0 85 941.0 86 604.0 87 440.5 88 277.0 89 215.5 90 154.0 91 129.0 92 104.0 93 81.0 94 58.0 95 60.5 96 63.0 97 50.5 98 38.0 99 34.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009385276053157894 2 4.2660345696172243E-4 3 3.102570596085254E-4 4 0.0 5 0.0 6 3.8782132451065675E-5 7 1.551285298042627E-4 8 0.0 9 0.0012410282384341016 10 8.144247814723791E-4 11 3.8782132451065675E-5 12 2.3269279470639404E-4 13 2.714749271574597E-4 14 1.939106622553284E-4 15 0.004537509496774684 16 8.532069139234449E-4 17 0.0 18 5.041677218638538E-4 19 3.8782132451065675E-5 20 6.980783841191821E-4 21 0.0 22 1.939106622553284E-4 23 6.205141192170508E-4 24 3.878213245106568E-4 25 0.0019003244901022183 26 0.0058561020001109175 27 0.006050012662366246 28 0.004459945231872553 29 0.002753531404025663 30 0.003994559642459765 31 0.008221812079625922 32 0.003063788463634188 33 0.00376186684775337 34 0.003451609788144845 35 0.002986224198732057 36 0.007911555020017396 37 0.00430481670206829 38 0.00880354406639191 39 0.004266034569617224 40 0.002249363682161809 41 0.003839431112655502 42 0.0017451959602979553 43 0.0012798103708851671 44 0.0013573746357872986 45 0.00143493890068943 46 0.0012022461059830358 47 0.002133017284808612 48 0.002016670887455415 49 3.4903919205959104E-4 50 0.0015512852980426272 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2578507.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.126813697129464 #Duplication Level Percentage of deduplicated Percentage of total 1 73.33565749021719 34.56075867897962 2 14.698461672755148 13.853833297726592 3 5.089363523897019 7.195364598829832 4 2.302754351254216 4.340859012072467 5 1.2347179979793017 2.9094162529631613 6 0.746931340797614 2.112029648538976 7 0.4829230468426927 1.5931037121023988 8 0.3412125795087235 1.286420933249967 9 0.23929079317301225 1.0149311366372598 >10 1.3290021716619447 11.470693603571682 >50 0.10277573647004166 3.357775286475678 >100 0.07851803892594712 7.695186857181431 >500 0.012426524673853662 4.033533621967687 >1k 0.005964731843448663 4.576093359703321 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3081 0.11948775008173333 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3039 0.11785890051878858 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3027 0.1173935149293758 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2768 0.10734894262454979 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2658 0.10308290805493257 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2624 0.10176431555159633 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2583 0.10017424812110265 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9391066225532837E-4 2 0.0 0.0 0.0 0.0 1.9391066225532837E-4 3 0.0 0.0 0.0 0.0 1.9391066225532837E-4 4 0.0 0.0 0.0 0.0 1.9391066225532837E-4 5 0.0 0.0 0.0 0.0 2.3269279470639404E-4 6 0.0 0.0 0.0 0.0 3.102570596085254E-4 7 0.0 0.0 0.0 0.0 3.102570596085254E-4 8 0.0 0.0 0.0 0.0 3.102570596085254E-4 9 0.0 0.0 0.0 0.0 3.490391920595911E-4 10 0.0 0.0 0.0 0.0 3.490391920595911E-4 11 0.0 0.0 0.0 0.0 3.490391920595911E-4 12 0.0 0.0 0.0 0.0 6.980783841191822E-4 13 0.0 0.0 0.0 0.0 8.144247814723792E-4 14 0.0 0.0 0.0 3.8782132451065675E-5 8.919890463745105E-4 15 0.0 0.0 0.0 3.8782132451065675E-5 0.0010858997086298388 16 0.0 0.0 0.0 3.8782132451065675E-5 0.0011634639735319703 17 0.0 0.0 0.0 3.8782132451065675E-5 0.0012022461059830358 18 0.0 0.0 0.0 3.8782132451065675E-5 0.0012410282384341016 19 0.0 0.0 0.0 3.8782132451065675E-5 0.0012798103708851673 20 0.0 0.0 0.0 7.756426490213135E-5 0.0013185925033362329 21 0.0 0.0 0.0 1.1634639735319702E-4 0.0013573746357872986 22 0.0 0.0 0.0 1.551285298042627E-4 0.0013961567682383644 23 0.0 0.0 0.0 2.714749271574597E-4 0.0013961567682383644 24 0.0 0.0 0.0 5.817319867659852E-4 0.0013961567682383644 25 0.0 0.0 0.0 6.980783841191822E-4 0.0013961567682383644 26 0.0 0.0 0.0 9.307711788255761E-4 0.001551285298042627 27 0.0 0.0 0.0 0.0010858997086298388 0.001667631695395824 28 0.0 0.0 0.0 0.0020942351523575466 0.001667631695395824 29 0.0 0.0 0.0 0.0038394311126555016 0.0017451959602979555 30 0.0 0.0 0.0 0.007601297960408872 0.0017451959602979555 31 0.0 0.0 0.0 0.01857664144406046 0.0017451959602979555 32 0.0 0.0 0.0 0.029513202795260977 0.0017451959602979555 33 0.0 0.0 0.0 0.04122540679548281 0.0017451959602979555 34 0.0 0.0 0.0 0.05549723153747498 0.0018615423576511523 35 0.0 0.0 0.0 0.07159181650466724 0.0018615423576511523 36 0.0 0.0 0.0 0.09583064928658329 0.0018615423576511523 37 0.0 0.0 0.0 0.13403104975088298 0.001900324490102218 38 0.0 0.0 0.0 0.18770552106315785 0.0019778887550043495 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4400 0.0 22.800573 1 GGTATCA 2180 0.0 20.183992 1 CGTCTTA 225 0.0 18.577166 15 GGCGTTA 805 0.0 17.490105 42 CGTTATT 820 0.0 16.901224 44 TAGGACG 500 0.0 16.718473 4 GTAAACG 545 0.0 16.551195 27 CGCGGGA 560 0.0 16.498816 44 TAAACGC 575 0.0 16.452587 28 AACGCAG 6090 0.0 16.290796 6 GTATTAG 675 0.0 15.970772 1 GCGTTAT 900 0.0 15.643929 43 CGCTTCG 595 0.0 15.530404 32 TAACACG 85 0.0029829782 15.527995 4 CGCAATA 880 0.0 15.501592 36 ATAAGAC 370 0.0 15.458049 3 TAGTACG 285 0.0 15.437188 2 TACGACG 875 0.0 15.335744 5 TCTATAC 360 0.0 15.276384 3 AAACGCT 605 0.0 15.273408 29 >>END_MODULE