##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063960_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1909587 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.261580121775022 32.0 32.0 32.0 32.0 32.0 2 30.80918072860781 32.0 32.0 32.0 32.0 32.0 3 30.811408959110008 32.0 32.0 32.0 32.0 32.0 4 30.851021189398544 32.0 32.0 32.0 32.0 32.0 5 30.72991123211459 32.0 32.0 32.0 32.0 32.0 6 34.41314430816716 36.0 36.0 36.0 32.0 36.0 7 34.347495557940015 36.0 36.0 36.0 32.0 36.0 8 34.29497372992171 36.0 36.0 36.0 32.0 36.0 9 34.466492492879354 36.0 36.0 36.0 32.0 36.0 10 34.10791548120091 36.0 36.0 36.0 32.0 36.0 11 34.458637914899924 36.0 36.0 36.0 32.0 36.0 12 34.23803052701972 36.0 36.0 36.0 32.0 36.0 13 34.33704303600726 36.0 36.0 36.0 32.0 36.0 14 34.232597415043145 36.0 36.0 36.0 32.0 36.0 15 34.14277694600979 36.0 36.0 36.0 32.0 36.0 16 34.14979678852024 36.0 36.0 36.0 32.0 36.0 17 34.07018271490118 36.0 36.0 36.0 32.0 36.0 18 34.06398346867673 36.0 36.0 36.0 32.0 36.0 19 34.07939098873212 36.0 36.0 36.0 32.0 36.0 20 34.06225325161933 36.0 36.0 36.0 32.0 36.0 21 34.052903062285196 36.0 36.0 36.0 32.0 36.0 22 34.02462888572241 36.0 36.0 36.0 32.0 36.0 23 33.969120024382235 36.0 36.0 36.0 32.0 36.0 24 33.949219909854854 36.0 36.0 36.0 32.0 36.0 25 33.53754607671711 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 12.0 4 18.0 5 24.0 6 82.0 7 42.0 8 89.0 9 130.0 10 178.0 11 57.0 12 107.0 13 95.0 14 176.0 15 265.0 16 429.0 17 658.0 18 820.0 19 1161.0 20 1843.0 21 2787.0 22 4338.0 23 6873.0 24 10539.0 25 15221.0 26 21824.0 27 29269.0 28 39316.0 29 53705.0 30 70442.0 31 96636.0 32 136805.0 33 193135.0 34 406711.0 35 815800.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.41469366244589 17.090761075409755 11.38063933456651 26.113905927577846 2 16.711504048456842 19.71554753015591 37.72477825265659 25.848170168730654 3 18.826641334266192 23.938332921367614 28.567500932159717 28.667524812206473 4 12.717359654947765 15.70849663892479 35.90610775131605 35.668035954811394 5 14.684902666268638 36.56846879402538 33.689150051586616 15.057478488119367 6 33.9018275159704 35.534456634402005 17.140144125138203 13.423571724489383 7 30.110229835807623 30.443632660800734 20.9363355127175 18.50980199067415 8 28.04735135123808 33.07139949677271 19.411864240740247 19.46938491124896 9 27.765040337749408 14.080174617029769 18.259289104144642 39.895495941076184 10 15.904258384989022 26.742573894271327 31.74689672879322 25.606270991946428 11 37.0138137873796 20.83857297351676 22.81554161112648 19.33207162797716 12 24.953415693409237 23.486193438582077 29.007560386675944 22.55283048133274 13 29.759290952135913 19.583129406265687 25.036392466418846 25.62118717517955 14 23.76024017276173 19.596938206030206 25.296744263066522 31.346077358141542 15 25.174596886600053 27.325513153454523 22.174066598337035 25.325823361608386 16 25.6142761395858 25.63953418298876 23.929271190162147 24.81691848726329 17 24.11691129734168 25.801999280020247 25.214330217089092 24.86675920554898 18 24.69962360581645 25.009669274138858 26.258656489733802 24.032050630310895 19 25.75796403991047 24.705070981583933 25.227508436088797 24.309456542416797 20 25.9527478171546 24.367210674716727 24.862320891376584 24.81772061675209 21 26.80401727739527 24.044916615919647 24.339913151845916 24.81115295483917 22 25.978582782477353 24.332434878630004 24.784614570269447 24.904367768623196 23 24.737460829423043 24.21188458496615 25.27378130304963 25.776873282561176 24 24.92602550194173 24.866699159892878 25.148080017189965 25.059195320975427 25 25.048569028289265 24.480414902922213 25.197459893538575 25.273556175249944 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 118.0 1 118.0 2 312.5 3 507.0 4 507.0 5 507.0 6 1408.0 7 2309.0 8 2309.0 9 2309.0 10 2569.5 11 2830.0 12 2830.0 13 2830.0 14 3707.5 15 4585.0 16 4585.0 17 4585.0 18 7975.0 19 11365.0 20 11365.0 21 11365.0 22 18878.0 23 26391.0 24 26391.0 25 26391.0 26 40024.5 27 53658.0 28 53658.0 29 53658.0 30 69277.5 31 84897.0 32 84897.0 33 84897.0 34 103373.0 35 121849.0 36 121849.0 37 121849.0 38 139396.0 39 156943.0 40 156943.0 41 156943.0 42 179968.0 43 202993.0 44 202993.0 45 202993.0 46 224745.5 47 246498.0 48 246498.0 49 246498.0 50 251921.0 51 257344.0 52 257344.0 53 257344.0 54 241767.5 55 226191.0 56 226191.0 57 226191.0 58 206453.0 59 186715.0 60 186715.0 61 186715.0 62 163465.0 63 140215.0 64 140215.0 65 140215.0 66 114494.5 67 88774.0 68 88774.0 69 88774.0 70 67463.0 71 46152.0 72 46152.0 73 46152.0 74 34979.5 75 23807.0 76 23807.0 77 23807.0 78 19052.5 79 14298.0 80 14298.0 81 14298.0 82 9964.0 83 5630.0 84 5630.0 85 5630.0 86 4222.5 87 2815.0 88 2815.0 89 2815.0 90 2038.0 91 1261.0 92 1261.0 93 1261.0 94 855.5 95 450.0 96 450.0 97 450.0 98 721.0 99 992.0 100 992.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03644767166931907 2 0.004922530369132173 3 0.0022517958071562073 4 0.004137020203845125 5 0.009269019950387179 6 0.014348652352576763 7 0.025398162010947918 8 0.037076079801548714 9 0.04990607916790385 10 0.05849432364170891 11 0.05545701766926566 12 0.06383579276566084 13 0.06414999683177566 14 0.0677633435920961 15 0.06236950712379169 16 0.06723967014857139 17 0.06284081322296392 18 0.07755603698600798 19 0.07415215960309743 20 0.07996493482622159 21 0.07483293507967953 22 0.07834154715129502 23 0.08305460814301731 24 0.07839391449564749 25 0.07739893495295055 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1909587.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.557857517518386 #Duplication Level Percentage of deduplicated Percentage of total 1 78.51837044673485 43.62312437787421 2 12.909979055218903 14.34501553807997 3 3.7465448887990513 6.244500213446533 4 1.5543225765739144 3.4541932898222245 5 0.8269818102477147 2.2972668791660977 6 0.5255754321411326 1.7519906984163118 7 0.34705765894493734 1.3497245976218422 8 0.263575360464189 1.171494585743837 9 0.16989460249383154 0.8495082106512943 >10 0.9944593261410508 9.889823750591766 >50 0.06853592702844091 2.627673242093639 >100 0.06378817462578862 7.331931554627298 >500 0.00844706010587271 3.087575853468631 >1k 0.0024676804803673083 1.9761772083964184 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3992 0.20905043865505996 No Hit TATCAACGCAGAGTACTTTTTTTTT 2552 0.13364146278750327 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.0473468870493987E-4 7 0.0 0.0 0.0 0.0 1.0473468870493987E-4 8 0.0 0.0 0.0 0.0 1.0473468870493987E-4 9 0.0 0.0 0.0 0.0 1.0473468870493987E-4 10 0.0 0.0 0.0 0.0 1.0473468870493987E-4 11 0.0 0.0 0.0 0.0 1.0473468870493987E-4 12 0.0 0.0 0.0 0.0 2.0946937740987974E-4 13 0.0 0.0 0.0 0.0 2.6183672176234964E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGAC 45 6.780184E-4 14.772926 3 TAATACG 40 0.005286599 14.2471895 4 CGTTATT 160 0.0 13.055134 2 TCGCGTA 75 1.4764217E-5 12.668817 9 GTATCAA 2570 0.0 12.564297 1 ATCGCCA 275 0.0 12.437822 16 CGCATCG 270 0.0 12.314968 13 GCGTTAT 170 0.0 12.290405 1 AAGACGG 265 0.0 12.1875515 5 CGAGCCG 360 0.0 12.140312 15 GGTATCA 930 0.0 11.845882 1 CGCCAGT 285 0.0 11.668647 18 CGCGGCG 155 2.5465852E-11 11.646527 16 TAATACC 115 7.095514E-8 11.562936 4 CGGTTCT 300 0.0 11.40044 12 AGGCCCG 405 0.0 11.260284 10 TCGCCAG 330 0.0 10.940964 17 TCTAGAT 315 0.0 10.85102 2 GTATAGG 150 2.1445885E-9 10.763415 1 GTTATTC 195 1.8189894E-12 10.71443 3 >>END_MODULE