##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063958_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1412981 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.267319235007406 32.0 32.0 32.0 32.0 32.0 2 30.858675382046894 32.0 32.0 32.0 32.0 32.0 3 30.873809343508512 32.0 32.0 32.0 32.0 32.0 4 30.90794426818195 32.0 32.0 32.0 32.0 32.0 5 30.80871504995467 32.0 32.0 32.0 32.0 32.0 6 34.47385279773755 36.0 36.0 36.0 32.0 36.0 7 34.42304673594337 36.0 36.0 36.0 32.0 36.0 8 34.375094923427845 36.0 36.0 36.0 32.0 36.0 9 34.52626893072164 36.0 36.0 36.0 32.0 36.0 10 34.212046729573856 36.0 36.0 36.0 32.0 36.0 11 34.487696579076434 36.0 36.0 36.0 32.0 36.0 12 34.299180243754165 36.0 36.0 36.0 32.0 36.0 13 34.37761866578531 36.0 36.0 36.0 32.0 36.0 14 34.28361386317297 36.0 36.0 36.0 32.0 36.0 15 34.22654090890111 36.0 36.0 36.0 32.0 36.0 16 34.21674742972482 36.0 36.0 36.0 32.0 36.0 17 34.14649170795644 36.0 36.0 36.0 32.0 36.0 18 34.14394744161457 36.0 36.0 36.0 32.0 36.0 19 34.16148200152727 36.0 36.0 36.0 32.0 36.0 20 34.12348219827443 36.0 36.0 36.0 32.0 36.0 21 34.115609480948436 36.0 36.0 36.0 32.0 36.0 22 34.09200194482445 36.0 36.0 36.0 32.0 36.0 23 34.02076956448813 36.0 36.0 36.0 32.0 36.0 24 34.020841044571725 36.0 36.0 36.0 32.0 36.0 25 33.603914702320836 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 11.0 5 15.0 6 45.0 7 27.0 8 80.0 9 80.0 10 141.0 11 39.0 12 85.0 13 69.0 14 142.0 15 254.0 16 421.0 17 544.0 18 727.0 19 973.0 20 1517.0 21 2119.0 22 3332.0 23 5029.0 24 7460.0 25 10559.0 26 15348.0 27 20523.0 28 28152.0 29 37755.0 30 50076.0 31 67934.0 32 95531.0 33 136479.0 34 291392.0 35 636120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.48041278570882 16.97593971334955 11.5242854270446 26.019362073897025 2 16.598261598250982 19.359731390671854 38.173920859617795 25.86808615145937 3 19.588395700087545 22.91481918442078 28.34795631012648 29.148828805365195 4 12.600341135088081 15.519523260175664 35.97701230775764 35.90312329697862 5 14.615630160149088 36.40035077512384 33.83415754162977 15.149861523097297 6 34.278516886889406 35.43634963462938 16.841235776593063 13.44389770188815 7 30.296635815031763 30.21855699293893 20.226237457306173 19.25856973472313 8 27.799111352765767 33.60321249656633 19.128075079080542 19.46960107158736 9 27.090900851527238 14.354103913796498 18.252818480109553 40.30217675456671 10 15.860052487044651 26.923474568709732 31.657364119312426 25.559108824933187 11 37.5043902881162 20.994145338363754 22.133425104517183 19.368039269002864 12 24.49517232197362 23.399614465612796 29.216481382598264 22.88873182981532 13 29.946751667595567 19.50635347006472 24.932315342870677 25.614579519469032 14 23.374808693749234 19.6939383273265 25.0613490197967 31.869903959127566 15 25.0610071310715 27.540594704453557 22.108446106236677 25.289952058238264 16 25.61171489801093 25.76447542304821 24.098486275631828 24.52532340330903 17 23.976902223947015 25.852569677158016 25.211248056064655 24.95928004283031 18 24.529244028166737 25.400140805367037 26.27103758256733 23.79957758389889 19 25.60003739609834 24.73751905217889 25.12422870547173 24.53821484625104 20 25.648795054425122 24.657753525875307 25.01175763963259 24.681693780066976 21 26.726614424858486 24.25065302260223 24.361851014522315 24.660881538016966 22 25.791394982838412 24.470951373847807 25.176325932767373 24.561327710546408 23 24.723904827203235 24.484428742229955 25.159013253701573 25.63265317686524 24 24.655037842784232 24.96908408138288 25.33993345109477 25.035944624738114 25 25.019353860820775 24.621723212521328 25.23077664050974 25.128146286148162 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 63.0 1 63.0 2 188.5 3 314.0 4 314.0 5 314.0 6 778.0 7 1242.0 8 1242.0 9 1242.0 10 1529.5 11 1817.0 12 1817.0 13 1817.0 14 2500.5 15 3184.0 16 3184.0 17 3184.0 18 5716.5 19 8249.0 20 8249.0 21 8249.0 22 13756.0 23 19263.0 24 19263.0 25 19263.0 26 29747.0 27 40231.0 28 40231.0 29 40231.0 30 52936.5 31 65642.0 32 65642.0 33 65642.0 34 78413.0 35 91184.0 36 91184.0 37 91184.0 38 104440.0 39 117696.0 40 117696.0 41 117696.0 42 133958.0 43 150220.0 44 150220.0 45 150220.0 46 164749.0 47 179278.0 48 179278.0 49 179278.0 50 184695.0 51 190112.0 52 190112.0 53 190112.0 54 177060.0 55 164008.0 56 164008.0 57 164008.0 58 150496.5 59 136985.0 60 136985.0 61 136985.0 62 119996.5 63 103008.0 64 103008.0 65 103008.0 66 85522.0 67 68036.0 68 68036.0 69 68036.0 70 51618.5 71 35201.0 72 35201.0 73 35201.0 74 27017.5 75 18834.0 76 18834.0 77 18834.0 78 14767.5 79 10701.0 80 10701.0 81 10701.0 82 7343.5 83 3986.0 84 3986.0 85 3986.0 86 2966.5 87 1947.0 88 1947.0 89 1947.0 90 1340.0 91 733.0 92 733.0 93 733.0 94 532.5 95 332.0 96 332.0 97 332.0 98 523.5 99 715.0 100 715.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03743857843806817 2 0.005237154639729763 3 0.0015569919199196593 4 0.0036093903598137553 5 0.007784959599598296 6 0.011960528839382837 7 0.021656342158882534 8 0.03517386291818503 9 0.049186790197461965 10 0.058245652276994526 11 0.05470703427717711 12 0.06475670939665855 13 0.0649690264766476 14 0.06921536807642849 15 0.06022727835689227 16 0.06843687211646865 17 0.06348280691672428 18 0.078061913075972 19 0.07565565283609617 20 0.08018508387586246 21 0.07678801059603774 22 0.0783450025159574 23 0.08131744163580402 24 0.07692955531603043 25 0.07912349847591722 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1412981.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.10716549666831 #Duplication Level Percentage of deduplicated Percentage of total 1 73.59788003159535 38.34976915010278 2 15.140001280330154 15.778051046678666 3 5.103160772567845 7.977337287968951 4 2.2373601032107038 4.663299726945721 5 1.1671994604246696 3.0409727725985105 6 0.638725910343697 1.9969318030373482 7 0.4141347710462478 1.510557233698217 8 0.28860558223002164 1.2030735069217642 9 0.221788277956144 1.0401082654213678 >10 1.0321917655966841 9.566831027629043 >50 0.07792532421922546 2.8554812817672985 >100 0.07079612700627055 7.688563220617753 >500 0.007775251039563694 2.7241468094549566 >1k 0.0024553424335464293 1.6048768671576334 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2570 0.18188496519061473 No Hit TATCAACGCAGAGTACTTTTTTTTT 1721 0.12179923155371515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 7.077235999634814E-5 0.0 10 0.0 0.0 0.0 7.077235999634814E-5 0.0 11 0.0 0.0 0.0 2.1231707998904445E-4 0.0 12 0.0 0.0 0.0 2.1231707998904445E-4 7.077235999634814E-5 13 0.0 0.0 0.0 2.8308943998539256E-4 1.4154471999269628E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCTTA 60 2.5649982E-5 14.251727 17 GGTATCA 685 0.0 14.005524 1 TCGCGTA 110 1.8553692E-10 13.819367 9 GCGTTAT 105 1.373337E-9 13.569708 1 CGAACGA 100 1.0051735E-8 13.301611 16 TCCAACG 195 0.0 13.156372 18 TCGACGC 75 1.47651535E-5 12.668201 14 ATAAGCC 90 5.428392E-7 12.661922 3 GGTCGGC 160 0.0 12.4693775 11 CCAACGA 140 5.2750693E-11 12.216631 19 GATTTAG 70 1.09205575E-4 12.212737 1 GCGTAAC 125 1.4078978E-9 12.160613 11 CGGAAAA 55 0.003066236 12.091947 12 TAGGGCC 55 0.00307438 12.087665 4 AGGACGT 340 0.0 12.011907 5 AACCGCG 95 1.0389049E-6 12.000605 7 AAGAATT 310 0.0 11.953061 16 GTATCAA 1850 0.0 11.9120035 1 CCAACGT 80 2.8602983E-5 11.87728 19 CGACGCT 80 2.8613355E-5 11.87686 15 >>END_MODULE