##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063956_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1118132 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.311722587315273 32.0 32.0 32.0 32.0 32.0 2 31.355949029273823 32.0 32.0 32.0 32.0 32.0 3 31.447246836688333 32.0 32.0 32.0 32.0 32.0 4 31.53314277741805 32.0 32.0 32.0 32.0 32.0 5 31.46746716845596 32.0 32.0 32.0 32.0 32.0 6 35.05527880429144 36.0 36.0 36.0 36.0 36.0 7 35.070744777897424 36.0 36.0 36.0 36.0 36.0 8 35.021247938526045 36.0 36.0 36.0 36.0 36.0 9 35.14772853294602 36.0 36.0 36.0 36.0 36.0 10 34.98554285182787 36.0 36.0 36.0 36.0 36.0 11 35.14394186017393 36.0 36.0 36.0 36.0 36.0 12 35.04178308106735 36.0 36.0 36.0 36.0 36.0 13 35.09209377783661 36.0 36.0 36.0 36.0 36.0 14 35.03544304250303 36.0 36.0 36.0 36.0 36.0 15 34.996743676059715 36.0 36.0 36.0 36.0 36.0 16 35.013143349801275 36.0 36.0 36.0 36.0 36.0 17 34.96817280965038 36.0 36.0 36.0 36.0 36.0 18 34.97691238601524 36.0 36.0 36.0 36.0 36.0 19 34.97194964458579 36.0 36.0 36.0 36.0 36.0 20 34.965950352910035 36.0 36.0 36.0 36.0 36.0 21 34.956013243516864 36.0 36.0 36.0 36.0 36.0 22 34.93856449864595 36.0 36.0 36.0 36.0 36.0 23 34.89466270529776 36.0 36.0 36.0 32.0 36.0 24 34.864122482855336 36.0 36.0 36.0 32.0 36.0 25 34.832325700364535 36.0 36.0 36.0 32.0 36.0 26 34.78357921962702 36.0 36.0 36.0 32.0 36.0 27 34.76288488300129 36.0 36.0 36.0 32.0 36.0 28 34.744689356891676 36.0 36.0 36.0 32.0 36.0 29 34.716097026111406 36.0 36.0 36.0 32.0 36.0 30 34.691320881613265 36.0 36.0 36.0 32.0 36.0 31 34.677907438477746 36.0 36.0 36.0 32.0 36.0 32 34.648884925930034 36.0 36.0 36.0 32.0 36.0 33 34.62957056948554 36.0 36.0 36.0 32.0 36.0 34 34.61375848289826 36.0 36.0 36.0 32.0 36.0 35 34.57510025649923 36.0 36.0 36.0 32.0 36.0 36 34.54262913502163 36.0 36.0 36.0 32.0 36.0 37 34.52507127959847 36.0 36.0 36.0 32.0 36.0 38 34.49199647268838 36.0 36.0 36.0 32.0 36.0 39 34.47562810115443 36.0 36.0 36.0 32.0 36.0 40 34.45313612346306 36.0 36.0 36.0 32.0 36.0 41 34.43968869507357 36.0 36.0 36.0 32.0 36.0 42 34.38594101590868 36.0 36.0 36.0 32.0 36.0 43 34.36809786322188 36.0 36.0 36.0 32.0 36.0 44 34.301950932448044 36.0 36.0 36.0 32.0 36.0 45 34.27564545152093 36.0 36.0 36.0 32.0 36.0 46 34.232486862016295 36.0 36.0 36.0 32.0 36.0 47 34.21747074585112 36.0 36.0 36.0 32.0 36.0 48 34.16252821670429 36.0 36.0 36.0 32.0 36.0 49 34.13459502098142 36.0 36.0 36.0 32.0 36.0 50 33.52705494521219 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 14.0 21 30.0 22 97.0 23 277.0 24 844.0 25 1890.0 26 3993.0 27 7273.0 28 12708.0 29 19657.0 30 29415.0 31 41746.0 32 62086.0 33 100384.0 34 206070.0 35 631644.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1103291843912 18.440193339033804 12.165976766401082 26.28350071017391 2 15.494723775163688 20.733117556203265 37.96959027089003 25.802568397743013 3 18.238202858162417 24.672958714139938 28.92675366303233 28.16208476466532 4 12.164127312338794 16.4863361392036 36.340610947544654 35.008925600912946 5 13.965703512644303 37.31527225765831 33.621701194492246 15.097323035205147 6 33.73093134883122 36.194059551161715 16.97064118605065 13.104367913956413 7 29.71082994747485 30.67735354801897 21.00818240438732 18.60363410011886 8 27.501046388082983 34.00153112512655 19.34995152629564 19.147470960494825 9 27.40734447107645 14.154294708975781 18.691106500196756 39.747254319751015 10 15.851311395357573 27.086489667496032 31.762544695480454 25.299654241665937 11 36.92497844619419 21.056547885222855 23.100313737555137 18.918159931027823 12 24.989983293564624 23.720812927275134 29.21613906050449 22.073064718655758 13 29.680054519697208 19.885558719574146 25.325096947755533 25.109289812973113 14 23.28946238713278 20.274870140091295 25.46184336677017 30.973824106005754 15 24.700110904407556 28.243327847738982 22.325772753291357 24.730788494562105 16 24.999776411602987 26.018802889835314 24.714119875577527 24.267300822984172 17 23.45286603012882 26.327392472445116 25.73801662057789 24.481724876848173 18 24.171382882818428 25.333772162042273 27.07793740967045 23.416907545468852 19 25.613344399409016 24.798771522503603 25.59116454944497 23.996719528642416 20 25.69408856465445 24.838188353496626 25.294221287320422 24.173501794528498 21 26.559118243642075 24.369752408481286 24.623031985490083 24.44809736238655 22 25.707519326877325 24.94929042367091 25.2251075901593 24.118082659292465 23 24.193603202512783 24.81258753517058 25.917833653214945 25.075975609101693 24 24.908798374424375 25.070229052692582 25.76183206379955 24.259140509083494 25 24.639814686456102 25.054981419455242 25.81734273614732 24.48786115794134 26 23.884926189443366 25.9063650145564 26.34730538922156 23.861403406778674 27 24.70330224666542 25.34530887065686 25.419813122229012 24.531575760448707 28 23.98484909465738 25.41345246559966 25.90974747000452 24.691950969738436 29 24.300824075084385 25.04243798866293 25.72913741322348 24.927600523029206 30 24.08795356366661 25.33516979849565 26.055237056050945 24.521639581786797 31 24.92784344240668 25.008877023044484 25.21960010911807 24.84367942543077 32 24.482870880496847 25.51999112777436 25.069582576093648 24.92755541563515 33 24.037324632719244 25.268003599020467 25.768503562350524 24.926168205909764 34 24.759302569973304 25.338496831692908 25.946400382790525 23.955800215543263 35 25.081790683821993 25.351445043278854 25.796218220585317 23.77054605231384 36 24.038452938261713 25.60503093801485 25.56961187504584 24.7869042486776 37 24.84822412386772 25.550847154448274 25.12449735979737 24.476431361886636 38 24.396269212055298 25.59281891296259 25.508296602650333 24.50261527233178 39 25.24383339638791 24.945375058470823 25.063255816449466 24.7475357286918 40 25.709709068696064 25.165928956201554 25.45123464022417 23.673127334878217 41 24.427258343939247 25.407325190258 26.130793042044136 24.034623423758617 42 25.333150882916915 26.031113162187687 25.28601785867605 23.34971809621934 43 24.435703566171014 25.29419971773999 25.655878896502877 24.614217819586127 44 24.05857684454545 25.756604160014884 25.321499193736635 24.863319801703035 45 24.252741876773623 25.854357444319533 25.35280170929622 24.540098969610625 46 24.21803800496728 25.274725274725274 25.29118151320479 25.216055207102656 47 24.961363303008298 25.137196049039982 25.521595409388002 24.379845238563718 48 25.107369068764502 25.837085213745386 24.591138943892616 24.464406773597496 49 24.623320964434274 25.77882476677515 24.965858082310866 24.63199618647971 50 24.480061961481567 26.324686033803353 24.624501616114276 24.570750388600803 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 16.5 2 14.0 3 42.5 4 71.0 5 101.0 6 131.0 7 125.0 8 119.0 9 185.5 10 252.0 11 376.0 12 500.0 13 976.0 14 1452.0 15 1975.5 16 2499.0 17 2789.0 18 3079.0 19 3183.5 20 3288.0 21 3633.0 22 3978.0 23 4578.0 24 5178.0 25 6234.5 26 7291.0 27 9737.5 28 12184.0 29 14579.0 30 16974.0 31 19272.0 32 21570.0 33 25848.5 34 30127.0 35 35244.0 36 40361.0 37 45129.0 38 49897.0 39 51485.5 40 53074.0 41 56067.5 42 59061.0 43 59538.5 44 60016.0 45 65475.0 46 70934.0 47 75487.5 48 80041.0 49 82395.0 50 84749.0 51 82034.0 52 79319.0 53 78246.5 54 77174.0 55 77348.5 56 77523.0 57 75678.0 58 73833.0 59 66604.0 60 59375.0 61 51832.0 62 44289.0 63 38201.5 64 32114.0 65 26901.5 66 21689.0 67 18513.5 68 15338.0 69 13646.0 70 11954.0 71 9219.0 72 6484.0 73 5497.5 74 4511.0 75 3562.5 76 2614.0 77 2262.5 78 1911.0 79 1589.5 80 1268.0 81 1015.0 82 762.0 83 664.5 84 567.0 85 408.0 86 249.0 87 180.5 88 112.0 89 93.0 90 74.0 91 56.5 92 39.0 93 32.5 94 26.0 95 20.5 96 15.0 97 15.5 98 16.0 99 16.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008585748373179554 2 2.6830463666186106E-4 3 8.943487888728702E-5 4 0.0 5 0.0 6 8.943487888728702E-5 7 8.943487888728702E-5 8 0.0 9 0.0010732185466474442 10 8.943487888728701E-4 11 0.0 12 0.0 13 3.5773951554914806E-4 14 3.5773951554914806E-4 15 0.004650613702138925 16 5.366092733237221E-4 17 0.0 18 3.5773951554914806E-4 19 0.0 20 9.83783667760157E-4 21 0.0 22 0.0 23 8.943487888728701E-4 24 4.4717439443643506E-4 25 0.0024147417299567493 26 0.00599213688544823 27 0.006707615916546525 28 0.004203439307702489 29 0.00268304636661861 30 0.0037562649132660544 31 0.0068864856743211 32 0.0032196556399423323 33 0.004471743944364351 34 0.0024147417299567493 35 0.0030407858821677584 36 0.00804913909985583 37 0.0032196556399423323 38 0.007512529826532109 39 0.004740048581026212 40 0.0029513510032804714 41 0.004024569549927915 42 0.0017886975777457403 43 0.0012520883044220181 44 9.83783667760157E-4 45 9.83783667760157E-4 46 0.001341523183309305 47 0.0021464370932948885 48 0.0023253068510694624 49 4.4717439443643506E-4 50 0.0016098278199711661 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1118132.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.33922643266424 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10651059767038 47.5345837108578 2 12.304698288204804 14.603025558188017 3 3.5044374142035837 6.238518157215805 4 1.3825366961727823 3.2815463226265695 5 0.7416910997548755 2.2005688055723156 6 0.433788856342233 1.5444417102274934 7 0.2822437931262717 1.1723689844673713 8 0.1959673492476005 0.9302840728329889 9 0.14243063884617654 0.7606551536498063 >10 0.7591481586434594 8.280094165656438 >50 0.0738991830700854 3.0594047390253247 >100 0.06642962842922379 7.834535688420444 >500 0.005763298998970474 2.2772014441786887 >1k 4.549972893924059E-4 0.2827714870809564 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.943487888728702E-5 2 0.0 0.0 0.0 0.0 8.943487888728702E-5 3 0.0 0.0 0.0 0.0 8.943487888728702E-5 4 0.0 0.0 0.0 0.0 8.943487888728702E-5 5 0.0 0.0 0.0 0.0 8.943487888728702E-5 6 0.0 0.0 0.0 0.0 1.7886975777457403E-4 7 0.0 0.0 0.0 0.0 2.68304636661861E-4 8 0.0 0.0 0.0 0.0 2.68304636661861E-4 9 0.0 0.0 0.0 0.0 2.68304636661861E-4 10 0.0 0.0 0.0 0.0 2.68304636661861E-4 11 0.0 0.0 0.0 0.0 2.68304636661861E-4 12 0.0 0.0 0.0 0.0 7.154790310982961E-4 13 0.0 0.0 0.0 0.0 9.83783667760157E-4 14 0.0 0.0 0.0 0.0 9.83783667760157E-4 15 0.0 0.0 0.0 0.0 0.0011626534255347312 16 0.0 0.0 0.0 0.0 0.0011626534255347312 17 0.0 0.0 0.0 0.0 0.0011626534255347312 18 0.0 0.0 0.0 0.0 0.0011626534255347312 19 0.0 0.0 0.0 0.0 0.0011626534255347312 20 0.0 0.0 0.0 1.7886975777457403E-4 0.0011626534255347312 21 0.0 0.0 0.0 1.7886975777457403E-4 0.0011626534255347312 22 0.0 0.0 0.0 1.7886975777457403E-4 0.0014309580621965922 23 0.0 0.0 0.0 2.68304636661861E-4 0.0014309580621965922 24 0.0 0.0 0.0 3.5773951554914806E-4 0.0014309580621965922 25 0.0 0.0 0.0 5.36609273323722E-4 0.0014309580621965922 26 0.0 0.0 0.0 5.36609273323722E-4 0.0015203929410838792 27 0.0 0.0 0.0 7.154790310982961E-4 0.0015203929410838792 28 0.0 0.0 0.0 0.0011626534255347312 0.0015203929410838792 29 0.0 0.0 0.0 0.0025936114877313232 0.0015203929410838792 30 0.0 0.0 0.0 0.00599213688544823 0.0015203929410838792 31 0.0 0.0 0.0 0.012610317923107468 0.0016098278199711661 32 0.0 0.0 0.0 0.02092776165962516 0.0016992626988584533 33 0.0 0.0 0.0 0.030139554185015724 0.0016992626988584533 34 0.0 0.0 0.0 0.04069286989371559 0.0017886975777457403 35 0.0 0.0 0.0 0.053213752937935774 0.0017886975777457403 36 0.0 0.0 0.0 0.068238812591 0.0017886975777457403 37 0.0 0.0 0.0 0.09480097162052423 0.0017886975777457403 38 0.0 0.0 0.0 0.13263192538984664 0.0017886975777457403 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2085 0.0 21.417137 1 GTCCTAC 795 0.0 21.305664 1 TCCTACA 860 0.0 21.229105 2 GTATTAC 135 1.1277734E-10 21.182688 1 TATAGGA 135 1.1277734E-10 21.18174 2 GTCCTAA 395 0.0 21.162062 1 GATATAC 375 0.0 20.530914 1 GATCGGT 65 4.9357675E-4 20.3053 6 CGGATCG 55 0.004482982 20.000326 26 GTCTACG 55 0.0044864644 19.997643 1 TATAAGG 145 2.9649527E-10 19.72093 2 CCTACAG 930 0.0 19.632093 3 TAGGACG 745 0.0 19.487635 4 GTATTAG 260 0.0 19.459246 1 ATCGATT 80 8.986678E-5 19.250313 29 TGTAGGA 860 0.0 18.927153 2 GTAGGAC 805 0.0 18.58166 3 TCTAGAT 285 0.0 18.523302 2 TAACGGC 120 3.156456E-7 18.336092 36 TGTACTA 60 0.007416806 18.331171 5 >>END_MODULE