##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063955_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 235614 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.371510181907695 32.0 32.0 32.0 32.0 32.0 2 31.495403498943187 32.0 32.0 32.0 32.0 32.0 3 31.536839916134017 32.0 32.0 32.0 32.0 32.0 4 31.599654519680495 32.0 32.0 32.0 32.0 32.0 5 31.590873207873894 32.0 32.0 32.0 32.0 32.0 6 35.16716324157308 36.0 36.0 36.0 36.0 36.0 7 35.18575721306883 36.0 36.0 36.0 36.0 36.0 8 35.14479614963457 36.0 36.0 36.0 36.0 36.0 9 35.22015669697047 36.0 36.0 36.0 36.0 36.0 10 35.12003531199335 36.0 36.0 36.0 36.0 36.0 11 35.220182162350284 36.0 36.0 36.0 36.0 36.0 12 35.161153411936475 36.0 36.0 36.0 36.0 36.0 13 35.16978617569414 36.0 36.0 36.0 36.0 36.0 14 35.1302639062195 36.0 36.0 36.0 36.0 36.0 15 35.122938365292384 36.0 36.0 36.0 36.0 36.0 16 35.11849890074444 36.0 36.0 36.0 36.0 36.0 17 35.096484079893386 36.0 36.0 36.0 36.0 36.0 18 35.10425526496728 36.0 36.0 36.0 36.0 36.0 19 35.098873581366135 36.0 36.0 36.0 36.0 36.0 20 35.07823389102515 36.0 36.0 36.0 36.0 36.0 21 35.07888750244043 36.0 36.0 36.0 36.0 36.0 22 35.06072644240155 36.0 36.0 36.0 36.0 36.0 23 35.02368280322901 36.0 36.0 36.0 36.0 36.0 24 35.01423090308725 36.0 36.0 36.0 36.0 36.0 25 34.98183045150118 36.0 36.0 36.0 36.0 36.0 26 34.936298352389926 36.0 36.0 36.0 36.0 36.0 27 34.91678338299082 36.0 36.0 36.0 36.0 36.0 28 34.89545612739481 36.0 36.0 36.0 36.0 36.0 29 34.878916363204226 36.0 36.0 36.0 36.0 36.0 30 34.87695128472841 36.0 36.0 36.0 32.0 36.0 31 34.847063417284204 36.0 36.0 36.0 32.0 36.0 32 34.83116028758902 36.0 36.0 36.0 32.0 36.0 33 34.80392930810563 36.0 36.0 36.0 32.0 36.0 34 34.81325812557828 36.0 36.0 36.0 32.0 36.0 35 34.76540443267378 36.0 36.0 36.0 32.0 36.0 36 34.744365784715676 36.0 36.0 36.0 32.0 36.0 37 34.746509120850206 36.0 36.0 36.0 32.0 36.0 38 34.70704627059513 36.0 36.0 36.0 32.0 36.0 39 34.71924843175702 36.0 36.0 36.0 32.0 36.0 40 34.69023063145654 36.0 36.0 36.0 32.0 36.0 41 34.686423557174024 36.0 36.0 36.0 32.0 36.0 42 34.655050209240535 36.0 36.0 36.0 32.0 36.0 43 34.626728462655024 36.0 36.0 36.0 32.0 36.0 44 34.6071328528865 36.0 36.0 36.0 32.0 36.0 45 34.55380410332153 36.0 36.0 36.0 32.0 36.0 46 34.55081616542311 36.0 36.0 36.0 32.0 36.0 47 34.51585219893555 36.0 36.0 36.0 32.0 36.0 48 34.46471347203477 36.0 36.0 36.0 32.0 36.0 49 34.45060565161663 36.0 36.0 36.0 32.0 36.0 50 33.89804086344615 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 8.0 22 18.0 23 66.0 24 177.0 25 347.0 26 813.0 27 1420.0 28 2492.0 29 3712.0 30 5401.0 31 7767.0 32 10796.0 33 16718.0 34 34811.0 35 151068.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.87953648287279 18.73254382613863 12.668619211341738 26.719300479646847 2 15.389218761273785 21.16309371723971 37.724573771396315 25.723113750090192 3 17.586890366830353 24.465967497548945 29.83748774473395 28.109654390886753 4 12.710619912229323 17.167061380053816 36.43331890295144 33.68899980476542 5 13.896033342670638 36.95153938220989 34.31544814824247 14.836979126877011 6 32.685663840009504 36.533907153225194 17.212050217728997 13.568378789036306 7 29.43683073514619 31.508023750811713 20.778564849987056 18.27658066405504 8 26.785759759606815 34.10535876475931 19.954247200930336 19.15463427470354 9 27.523640561601276 14.848140162640272 18.981630816766547 38.64658845899191 10 15.53789933407184 28.18883668419556 32.90381179146984 23.369452190262763 11 35.50213484767459 22.226607926523894 23.10601237617459 19.165244849626934 12 24.31444784455866 24.88402592386668 29.106628242074926 21.694897989499733 13 29.22304466665535 20.877544437464984 24.89771318948101 25.001697706398655 14 23.172222363696555 20.527218246793485 26.177986027994944 30.12257336151502 15 24.344995310026356 27.99765713533863 22.84844806437785 24.808899490257165 16 24.412386360742573 27.219944485472002 24.21969832013378 24.147970833651648 17 23.272810613970307 27.2615379391717 25.84269186041577 23.62295958644223 18 23.72407295013433 26.584696090623183 26.571963346674423 23.119267612568066 19 24.7756924461195 25.80194725270994 26.565908647194142 22.85645165397642 20 25.09273642483044 25.829959170507692 25.61732324904293 23.459981155618937 21 25.96577452952711 25.14748699143514 25.24892408770277 23.63781439133498 22 25.17762102421758 25.746347840111365 25.76884225894896 23.307188876722094 23 24.50893842418892 25.83060285554216 25.88662716669779 23.773831553571124 24 24.26648784235165 26.093212174200914 25.69085746541999 23.949442518027446 25 24.632440324606975 25.74615462972395 25.401514379817325 24.219890665851754 26 23.99904924002869 26.053369892317946 25.943862717051285 24.003718150602076 27 24.422977343531148 25.775234926105444 25.501048360398293 24.30073936996511 28 23.791414480106617 26.204341145811227 26.07870767297947 23.925536701102686 29 24.059674886464922 26.1487203429396 25.72726115190357 24.064343618691904 30 24.116006740037434 26.434274024116434 25.402046628495757 24.047672607350375 31 24.370636049152147 25.42498779685477 25.995033850463717 24.209342303529365 32 24.484105088918128 25.951784729001314 25.588896905903823 23.97521327617673 33 24.19790919470465 25.96953349490456 25.52556631282284 24.306990997567944 34 24.356776028182164 25.99040787742456 25.72471457068885 23.928101523704427 35 24.11261125518342 25.90457838689003 26.00644293251049 23.976367425416054 36 24.525787241989637 25.973573966154646 25.52026519412057 23.980373597735156 37 24.538007724629686 25.360977887186454 26.052374686982727 24.04863970120114 38 24.390368134876674 25.836930638855993 25.875556574261545 23.89714465200579 39 24.64994673333135 25.881234428518678 25.366394037528593 24.102424800621375 40 24.58288590746455 25.801864970056066 25.69448276154783 23.92076636093155 41 24.088945103265623 25.383903635730835 26.013344312114295 24.513806948889247 42 24.138296924141265 25.55123106502723 26.280405247677297 24.03006676315421 43 23.93988396127515 25.24075701049611 26.448680239886933 24.370678788341802 44 23.99346377488222 25.50952845804507 25.693731165909767 24.80327660116294 45 23.79737702134884 25.374559653664953 26.052799117185177 24.775264207801026 46 23.822216185932803 25.41296708147293 26.14764952549106 24.617167207103204 47 23.58293967599136 25.423261222947996 26.432127532245946 24.5616715688147 48 23.624734199457574 25.663281114049123 26.384391088625648 24.327593597867654 49 24.303412799803066 25.077139207089594 26.188707753816644 24.430740239290703 50 23.55737398774256 25.409571668675618 26.16165560327997 24.871398740301853 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 2.5 2 4.0 3 13.5 4 23.0 5 25.5 6 28.0 7 31.0 8 34.0 9 45.5 10 57.0 11 85.5 12 114.0 13 191.5 14 269.0 15 368.0 16 467.0 17 479.5 18 492.0 19 463.5 20 435.0 21 517.5 22 600.0 23 758.5 24 917.0 25 1174.0 26 1431.0 27 1766.5 28 2102.0 29 2573.5 30 3045.0 31 3750.5 32 4456.0 33 5228.5 34 6001.0 35 7020.0 36 8039.0 37 8983.0 38 9927.0 39 11034.0 40 12141.0 41 13111.0 42 14081.0 43 15326.5 44 16572.0 45 17525.0 46 18478.0 47 18919.0 48 19360.0 49 19394.5 50 19429.0 51 19135.5 52 18842.0 53 18123.5 54 17405.0 55 16514.5 56 15624.0 57 14396.0 58 13168.0 59 11770.0 60 10372.0 61 8969.5 62 7567.0 63 6435.0 64 5303.0 65 4293.0 66 3283.0 67 2766.0 68 2249.0 69 1836.5 70 1424.0 71 1042.5 72 661.0 73 543.5 74 426.0 75 381.0 76 336.0 77 270.0 78 204.0 79 157.0 80 110.0 81 86.0 82 62.0 83 51.5 84 41.0 85 33.0 86 25.0 87 13.5 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010186151926455984 2 4.24422996935666E-4 3 4.24422996935666E-4 4 0.0 5 0.0 6 0.0 7 4.24422996935666E-4 8 0.0 9 8.48845993871332E-4 10 0.001273268990806998 11 0.0 12 4.24422996935666E-4 13 8.48845993871332E-4 14 0.0 15 0.00212211498467833 16 0.0 17 0.0 18 4.24422996935666E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 8.48845993871332E-4 24 4.24422996935666E-4 25 0.002546537981613996 26 0.005517498960163658 27 0.003395383975485328 28 0.003395383975485328 29 0.001697691987742664 30 0.0029709609785496614 31 0.008064036941777654 32 0.001697691987742664 33 0.004668652966292325 34 0.001697691987742664 35 0.0029709609785496614 36 0.005517498960163658 37 0.001697691987742664 38 0.008912882935648984 39 0.0029709609785496614 40 0.0029709609785496614 41 0.003395383975485328 42 0.00212211498467833 43 0.001273268990806998 44 0.001697691987742664 45 0.001697691987742664 46 8.48845993871332E-4 47 0.001273268990806998 48 0.00212211498467833 49 4.24422996935666E-4 50 8.48845993871332E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 235614.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.967906046810526 #Duplication Level Percentage of deduplicated Percentage of total 1 58.36404202176515 25.661447161250717 2 17.35586210022134 15.26201828367863 3 8.466331639299192 11.167406222335385 4 4.9960884831118335 8.786701961080528 5 3.0538897314988103 6.713656839592956 6 2.064160482660262 5.445408850028729 7 1.466558892514253 4.513706651872681 8 1.0365676015040972 3.6460565531279903 9 0.7133260998855955 2.8227109446456873 >10 2.475191676515471 15.735242690225038 >50 0.006983612145986498 0.17940773472165505 >100 9.97658877998071E-4 0.06623610744002424 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 4.2442299693566595E-4 0.0 27 0.0 0.0 0.0 0.0025465379816139956 0.0 28 0.0 0.0 0.0 0.007639613944841988 0.0 29 0.0 0.0 0.0 0.0186746118651693 0.0 30 0.0 0.0 0.0 0.04074460770582393 0.0 31 0.0 0.0 0.0 0.08912882935648986 0.0 32 0.0 0.0 0.0 0.14557708794893343 0.0 33 0.0 0.0 0.0 0.20160092354444134 0.0 34 0.0 0.0 0.0 0.25847360513382056 0.0 35 0.0 0.0 0.0 0.31874167069868514 0.0 36 0.0 0.0 0.0 0.40956819204291767 0.0 37 0.0 0.0 0.0 0.5619360479428217 0.0 38 0.0 0.0 0.0 0.7885779283064673 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAAAG 25 0.0023489625 35.2 2 GTATCAA 310 0.0 34.064518 1 GGTATCA 90 0.0 31.777779 1 ACACGCT 30 0.00573575 29.333336 9 ACCTATG 40 7.015225E-4 27.500002 7 TATACTC 40 7.015225E-4 27.500002 5 ATGAATT 50 8.313479E-5 26.4 22 CCATAAT 45 0.0013948791 24.444445 1 TGCAATC 55 1.5883149E-4 24.0 30 CTAGAAC 50 0.0025743335 22.0 3 GTAGGAC 50 0.0025743335 22.0 3 TTATACT 50 0.0025743335 22.0 4 TATCAAC 460 0.0 21.999998 2 ATCAACG 460 0.0 21.999998 3 TCAACGC 480 0.0 21.083336 4 CAACGCA 485 0.0 20.865978 5 AACGCAG 495 0.0 20.444445 6 TATTATG 55 0.0044730906 20.0 2 TAGGACA 55 0.0044730906 20.0 4 TAACTCA 55 0.0044730906 20.0 43 >>END_MODULE