##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063953_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1084074 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.118990954492038 32.0 32.0 32.0 32.0 32.0 2 30.967719915799105 32.0 32.0 32.0 32.0 32.0 3 31.227013100581694 32.0 32.0 32.0 32.0 32.0 4 31.38561205231377 32.0 32.0 32.0 32.0 32.0 5 31.2569077387706 32.0 32.0 32.0 32.0 32.0 6 34.83739670908074 36.0 36.0 36.0 32.0 36.0 7 34.88082178891847 36.0 36.0 36.0 32.0 36.0 8 34.77655584397375 36.0 36.0 36.0 32.0 36.0 9 34.98489863238118 36.0 36.0 36.0 36.0 36.0 10 34.73139564273288 36.0 36.0 36.0 32.0 36.0 11 34.99036043664916 36.0 36.0 36.0 36.0 36.0 12 34.85098249750478 36.0 36.0 36.0 32.0 36.0 13 34.91894741502886 36.0 36.0 36.0 32.0 36.0 14 34.850112630687576 36.0 36.0 36.0 32.0 36.0 15 34.78522591631199 36.0 36.0 36.0 32.0 36.0 16 34.81272680647262 36.0 36.0 36.0 32.0 36.0 17 34.771149386481 36.0 36.0 36.0 32.0 36.0 18 34.77757699197656 36.0 36.0 36.0 32.0 36.0 19 34.77392779459705 36.0 36.0 36.0 32.0 36.0 20 34.76719209205276 36.0 36.0 36.0 32.0 36.0 21 34.76121648522149 36.0 36.0 36.0 32.0 36.0 22 34.745571796759265 36.0 36.0 36.0 32.0 36.0 23 34.681483920839355 36.0 36.0 36.0 32.0 36.0 24 34.65662860653424 36.0 36.0 36.0 32.0 36.0 25 34.61882583661263 36.0 36.0 36.0 32.0 36.0 26 34.54490099384359 36.0 36.0 36.0 32.0 36.0 27 34.546610286751644 36.0 36.0 36.0 32.0 36.0 28 34.504462794975254 36.0 36.0 36.0 32.0 36.0 29 34.46760276512489 36.0 36.0 36.0 32.0 36.0 30 34.4462970240039 36.0 36.0 36.0 32.0 36.0 31 34.449730368960054 36.0 36.0 36.0 32.0 36.0 32 34.39734187887543 36.0 36.0 36.0 32.0 36.0 33 34.37276791067769 36.0 36.0 36.0 32.0 36.0 34 34.366860564869185 36.0 36.0 36.0 32.0 36.0 35 34.32236083514594 36.0 36.0 36.0 32.0 36.0 36 34.286125301409314 36.0 36.0 36.0 32.0 36.0 37 34.28047993033686 36.0 36.0 36.0 32.0 36.0 38 34.233225776100156 36.0 36.0 36.0 32.0 36.0 39 34.21401491042124 36.0 36.0 36.0 32.0 36.0 40 34.19560196075176 36.0 36.0 36.0 32.0 36.0 41 34.17070329147272 36.0 36.0 36.0 32.0 36.0 42 34.09880875290801 36.0 36.0 36.0 32.0 36.0 43 34.09605801817957 36.0 36.0 36.0 32.0 36.0 44 34.015735088195086 36.0 36.0 36.0 32.0 36.0 45 33.97641028195492 36.0 36.0 36.0 32.0 36.0 46 33.95361663502676 36.0 36.0 36.0 32.0 36.0 47 33.93029627128775 36.0 36.0 36.0 32.0 36.0 48 33.86489759924138 36.0 36.0 36.0 32.0 36.0 49 33.854293157109204 36.0 36.0 36.0 32.0 36.0 50 33.14683683955155 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 5.0 21 33.0 22 93.0 23 322.0 24 878.0 25 1967.0 26 4132.0 27 7907.0 28 13582.0 29 21947.0 30 33615.0 31 50097.0 32 75723.0 33 125084.0 34 244193.0 35 504492.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.073420351275985 18.636778349635744 12.094380857405643 26.195420441682632 2 15.659214202759783 20.663314487704216 37.48407622747957 26.19339508205643 3 18.297619157434482 24.55570212255666 28.920549411015894 28.226129308992963 4 12.02362569344897 15.995402527871713 36.51088394334704 35.47008783533228 5 14.107431780487309 37.09838996230885 33.4109110632669 15.383267193936945 6 34.34968461562587 36.248355739552835 16.32259421404812 13.079365430773176 7 30.062920117003188 30.536504460492974 20.7606867803183 18.639888642185536 8 27.72273848464219 34.0090252141459 19.093530515444517 19.174705785767394 9 27.127507467285085 13.835832267896118 18.360019998856153 40.67664026596265 10 15.363959474679978 26.965499237590436 31.876652925152875 25.793888362576713 11 37.4856328995991 20.696004147318355 22.827131727169917 18.99123122591262 12 24.739708008054823 23.4793662038741 29.229081859029527 22.55184392904155 13 29.51368454066619 19.38158974973941 25.589675943435385 25.51504976615901 14 23.101098264509616 20.103332429336003 25.198648800727625 31.596920505426752 15 24.69403324468208 28.268219401248867 22.07388588618507 24.963861467883984 16 25.308675570790367 25.94959536633806 24.338717071915298 24.403011990956276 17 23.39231454679293 26.53914769655946 25.51753847062101 24.550999286026602 18 24.416666436054467 25.06468672254862 26.91558025258493 23.603066588811988 19 25.623920160358203 24.898507757318928 25.360746001422413 24.116826080900456 20 25.642281597505683 24.77065489615475 25.16140637323408 24.42565713310549 21 26.46156996662589 24.342434188072033 24.518344688646714 24.677651156655358 22 25.514056710203093 24.94942683749157 25.039273185477363 24.497243266827972 23 23.943955596922336 24.634317557277257 25.83663954969656 25.585087296103847 24 24.686274292756544 25.25247493699657 25.537420161834866 24.523830608412016 25 24.632535399658686 24.930953369309535 25.75185646418523 24.68465476684655 26 24.120533943413804 25.780389479801848 26.164887777788024 23.93418879899632 27 24.7677367397074 25.297530366501324 25.286644827939302 24.648088065851972 28 23.888031999291528 25.12942517877833 25.95588289558165 25.026659926348493 29 24.195076412738562 24.997716888658886 25.734216320879078 25.072990377723475 30 23.9161017207136 25.451580080569947 26.032930914082396 24.599387284634055 31 24.972578135017976 24.85800132658173 25.10071596667494 25.06870457172536 32 24.45048153204679 25.391682963728275 24.894468838788235 25.2633666654367 33 23.92434011156734 25.08595408340706 25.88548619061281 25.10421961441279 34 24.8425804809021 25.171533311317045 25.879898085505598 24.105988122275253 35 25.239198698198216 25.171581017604584 25.738259614994334 23.850960669202866 36 24.026468830028268 25.757846921379496 25.420851814404532 24.794832434187704 37 25.025091417628197 25.398326254847625 25.01752709319617 24.55905523432801 38 24.33732939108936 25.417510389903917 25.45247397334834 24.79268624565838 39 25.194000110699065 24.82777070533754 24.986162616925885 24.992066567037508 40 25.484829448332675 25.24037374970135 25.45595600166414 23.81884080030183 41 24.30133197789354 25.324184729716144 26.18892333862533 24.18555995376499 42 25.432149785481762 25.952602123320084 25.22099852683023 23.394249564367925 43 24.351671544946438 25.208360814975595 25.69569681299046 24.744270827087504 44 24.14902920144347 25.741474610167742 25.1168758809508 24.992620307437992 45 24.30739343041925 25.941993825047945 25.149969051442866 24.60064369308994 46 24.32097603813825 25.213365361199052 25.200912130000663 25.26474647066203 47 24.838568033887796 25.15894130149218 25.583645742623943 24.418844921996076 48 25.382475981384705 25.756626739418202 24.474311727725993 24.386585551471097 49 24.606666740462778 25.63040325883616 24.842629798130744 24.92030020257032 50 24.58088190527848 26.073600956402863 24.525719008691386 24.819798129627273 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 12.5 2 11.0 3 48.5 4 86.0 5 105.0 6 124.0 7 132.0 8 140.0 9 205.0 10 270.0 11 391.5 12 513.0 13 894.5 14 1276.0 15 1787.5 16 2299.0 17 2546.5 18 2794.0 19 2923.5 20 3053.0 21 3602.5 22 4152.0 23 4881.5 24 5611.0 25 6519.5 26 7428.0 27 9608.5 28 11789.0 29 13926.0 30 16063.0 31 18324.5 32 20586.0 33 24422.0 34 28258.0 35 32775.0 36 37292.0 37 42220.0 38 47148.0 39 49212.5 40 51277.0 41 54411.0 42 57545.0 43 57708.5 44 57872.0 45 63154.0 46 68436.0 47 73022.0 48 77608.0 49 79454.5 50 81301.0 51 78703.0 52 76105.0 53 74495.5 54 72886.0 55 73589.0 56 74292.0 57 72469.0 58 70646.0 59 63924.5 60 57203.0 61 50727.0 62 44251.0 63 38284.5 64 32318.0 65 27419.0 66 22520.0 67 19257.0 68 15994.0 69 14551.0 70 13108.0 71 10258.5 72 7409.0 73 6320.5 74 5232.0 75 4119.5 76 3007.0 77 2664.0 78 2321.0 79 1900.5 80 1480.0 81 1248.0 82 1016.0 83 823.0 84 630.0 85 463.5 86 297.0 87 233.5 88 170.0 89 127.5 90 85.0 91 73.5 92 62.0 93 46.0 94 30.0 95 28.5 96 27.0 97 22.0 98 17.0 99 19.5 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0076563039054529484 2 2.76733876100709E-4 3 3.6897850146761196E-4 4 0.0 5 0.0 6 0.0 7 9.224462536690299E-5 8 0.0 9 0.001106935504402836 10 0.001014690879035933 11 0.0 12 2.76733876100709E-4 13 3.6897850146761196E-4 14 0.0 15 0.004704475893712053 16 6.45712377568321E-4 17 0.0 18 2.76733876100709E-4 19 9.224462536690299E-5 20 8.30201628302127E-4 21 0.0 22 9.224462536690299E-5 23 4.61223126834515E-4 24 5.53467752201418E-4 25 0.002213871008805672 26 0.005903656023481791 27 0.006180389899582501 28 0.00461223126834515 29 0.002490604884906381 30 0.004335497392244441 31 0.007840793156186755 32 0.003136317262474702 33 0.005995900648848695 34 0.002582849510273284 35 0.0035052957639423138 36 0.007564059280086046 37 0.0035052957639423138 38 0.008209771657654366 39 0.004981209769812762 40 0.003044072637107799 41 0.004335497392244441 42 0.001568158631237351 43 0.001568158631237351 44 0.001660403256604254 45 0.001568158631237351 46 0.001660403256604254 47 0.002398360259539478 48 0.0017526478819711569 49 5.53467752201418E-4 50 0.001106935504402836 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1084074.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.708447736031346 #Duplication Level Percentage of deduplicated Percentage of total 1 80.5125143972823 47.267647435893196 2 11.92128840686661 13.997606747613695 3 3.419909549559188 6.023327431567503 4 1.4093036597670492 3.30952121014526 5 0.7268670608874387 2.1336618427576455 6 0.4391581065308424 1.5469374447072266 7 0.284757743171506 1.1702379557690217 8 0.20300082316255147 0.9534290573607995 9 0.15482146802212468 0.8180395257413299 >10 0.7779039060109981 8.303098868650922 >50 0.07106809097859661 2.873679346703739 >100 0.07214493591623977 8.44879009479189 >500 0.005841054744621376 2.226658149778269 >1k 0.0014207971000430373 0.9273648885195154 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1267 0.1168739403398661 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1184 0.10921763643441315 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1134 0.10460540516606799 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1118 0.10312949116019754 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1114 0.10276051265872994 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1102 0.1016535771543271 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 9.2244625366903E-5 6 0.0 0.0 0.0 0.0 2.76733876100709E-4 7 0.0 0.0 0.0 9.2244625366903E-5 2.76733876100709E-4 8 0.0 0.0 0.0 9.2244625366903E-5 2.76733876100709E-4 9 0.0 0.0 0.0 9.2244625366903E-5 2.76733876100709E-4 10 0.0 0.0 0.0 1.84489250733806E-4 2.76733876100709E-4 11 0.0 0.0 0.0 1.84489250733806E-4 2.76733876100709E-4 12 0.0 0.0 0.0 1.84489250733806E-4 3.68978501467612E-4 13 0.0 0.0 0.0 1.84489250733806E-4 3.68978501467612E-4 14 0.0 0.0 0.0 1.84489250733806E-4 3.68978501467612E-4 15 0.0 0.0 0.0 1.84489250733806E-4 3.68978501467612E-4 16 0.0 0.0 0.0 2.76733876100709E-4 3.68978501467612E-4 17 0.0 0.0 0.0 2.76733876100709E-4 3.68978501467612E-4 18 0.0 0.0 0.0 2.76733876100709E-4 3.68978501467612E-4 19 0.0 0.0 0.0 2.76733876100709E-4 3.68978501467612E-4 20 0.0 0.0 0.0 2.76733876100709E-4 3.68978501467612E-4 21 0.0 0.0 0.0 4.61223126834515E-4 3.68978501467612E-4 22 0.0 0.0 0.0 7.37957002935224E-4 4.61223126834515E-4 23 0.0 0.0 0.0 8.302016283021269E-4 4.61223126834515E-4 24 0.0 0.0 0.0 9.2244625366903E-4 4.61223126834515E-4 25 0.0 0.0 0.0 9.2244625366903E-4 4.61223126834515E-4 26 0.0 0.0 0.0 0.001199180129769739 4.61223126834515E-4 27 0.0 0.0 0.0 0.0015681586312373509 5.53467752201418E-4 28 0.0 0.0 0.0 0.003044072637107799 5.53467752201418E-4 29 0.0 0.0 0.0 0.005995900648848695 5.53467752201418E-4 30 0.0 0.0 0.0 0.010331398041093136 5.53467752201418E-4 31 0.0 0.0 0.0 0.019186882076315824 5.53467752201418E-4 32 0.0 0.0 0.0 0.02951828011740896 5.53467752201418E-4 33 9.2244625366903E-5 0.0 0.0 0.04012641203460281 5.53467752201418E-4 34 9.2244625366903E-5 0.0 0.0 0.053132904211336124 6.45712377568321E-4 35 9.2244625366903E-5 0.0 0.0 0.06853775664760893 6.45712377568321E-4 36 9.2244625366903E-5 0.0 0.0 0.09104544523713326 6.45712377568321E-4 37 9.2244625366903E-5 0.0 0.0 0.12397677649311763 6.45712377568321E-4 38 9.2244625366903E-5 0.0 0.0 0.16557910253359087 6.45712377568321E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 385 0.0 21.717566 36 ATACGAA 375 0.0 21.707941 40 CGTCGTA 275 0.0 20.797384 10 CTAGCGG 415 0.0 20.145761 29 ACTGTTC 415 0.0 20.141117 8 CCCTTAC 110 1.267017E-7 19.997484 1 ACTATAC 110 1.2676355E-7 19.996563 3 TCTAGCG 420 0.0 19.90593 28 GATATAC 300 0.0 19.79751 1 TAGCGGC 425 0.0 19.67265 30 CGAATGC 405 0.0 19.555801 43 CAATACG 430 0.0 19.444796 38 GCAATAC 435 0.0 19.221294 37 GCGCAAT 440 0.0 19.002869 35 ACCGTCG 290 0.0 18.962257 8 AATACGA 445 0.0 18.788486 39 GTCGTAG 305 0.0 18.75174 11 TACGAAT 435 0.0 18.714605 41 GTCCTAC 720 0.0 18.636545 1 GTATACC 60 0.007418974 18.330181 4 >>END_MODULE