##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063951_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 877818 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278288893597534 32.0 32.0 32.0 32.0 32.0 2 31.359763641210364 32.0 32.0 32.0 32.0 32.0 3 31.451897773798212 32.0 32.0 32.0 32.0 32.0 4 31.54600725890788 32.0 32.0 32.0 32.0 32.0 5 31.48084227026559 32.0 32.0 32.0 32.0 32.0 6 35.05899970153266 36.0 36.0 36.0 36.0 36.0 7 35.085291028436416 36.0 36.0 36.0 36.0 36.0 8 35.0272436883272 36.0 36.0 36.0 36.0 36.0 9 35.13422600128956 36.0 36.0 36.0 36.0 36.0 10 34.98889063564429 36.0 36.0 36.0 36.0 36.0 11 35.14401960315236 36.0 36.0 36.0 36.0 36.0 12 35.04820361396098 36.0 36.0 36.0 36.0 36.0 13 35.09683784110146 36.0 36.0 36.0 36.0 36.0 14 35.03584114246917 36.0 36.0 36.0 36.0 36.0 15 35.00301087469156 36.0 36.0 36.0 36.0 36.0 16 35.02041197605882 36.0 36.0 36.0 36.0 36.0 17 34.98660428471506 36.0 36.0 36.0 36.0 36.0 18 34.9789546352433 36.0 36.0 36.0 36.0 36.0 19 34.993022471628514 36.0 36.0 36.0 36.0 36.0 20 34.97475216958413 36.0 36.0 36.0 36.0 36.0 21 34.97150434372501 36.0 36.0 36.0 36.0 36.0 22 34.955636589817026 36.0 36.0 36.0 36.0 36.0 23 34.90702058968944 36.0 36.0 36.0 32.0 36.0 24 34.88517209717732 36.0 36.0 36.0 32.0 36.0 25 34.8582713045301 36.0 36.0 36.0 32.0 36.0 26 34.79342414942505 36.0 36.0 36.0 32.0 36.0 27 34.79801052154319 36.0 36.0 36.0 32.0 36.0 28 34.77344278654573 36.0 36.0 36.0 32.0 36.0 29 34.744305767254716 36.0 36.0 36.0 32.0 36.0 30 34.726051413846605 36.0 36.0 36.0 32.0 36.0 31 34.71571897591528 36.0 36.0 36.0 32.0 36.0 32 34.678383218389236 36.0 36.0 36.0 32.0 36.0 33 34.650062997113295 36.0 36.0 36.0 32.0 36.0 34 34.63883060042059 36.0 36.0 36.0 32.0 36.0 35 34.60053792471788 36.0 36.0 36.0 32.0 36.0 36 34.57209467110494 36.0 36.0 36.0 32.0 36.0 37 34.569635163553265 36.0 36.0 36.0 32.0 36.0 38 34.52600652982737 36.0 36.0 36.0 32.0 36.0 39 34.522926164649164 36.0 36.0 36.0 32.0 36.0 40 34.499393951821446 36.0 36.0 36.0 32.0 36.0 41 34.478756416478134 36.0 36.0 36.0 32.0 36.0 42 34.40813357666396 36.0 36.0 36.0 32.0 36.0 43 34.39646601003853 36.0 36.0 36.0 32.0 36.0 44 34.33953735284535 36.0 36.0 36.0 32.0 36.0 45 34.30012257666168 36.0 36.0 36.0 32.0 36.0 46 34.27603443994085 36.0 36.0 36.0 32.0 36.0 47 34.23880804449214 36.0 36.0 36.0 32.0 36.0 48 34.18517847663183 36.0 36.0 36.0 32.0 36.0 49 34.17339471279924 36.0 36.0 36.0 32.0 36.0 50 33.55770900118248 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 9.0 21 34.0 22 92.0 23 281.0 24 672.0 25 1610.0 26 3207.0 27 6151.0 28 10035.0 29 15626.0 30 22646.0 31 32118.0 32 46841.0 33 74957.0 34 156396.0 35 507141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.55606090297178 18.20674836281109 11.916730088273763 26.32046064594337 2 15.761653379873186 20.883011663063016 37.49063013349069 25.864704823573103 3 18.22874243720502 24.822485780065776 28.979502561467825 27.969269221261378 4 12.141468960536239 16.301101139416144 36.673433445201624 34.88399645484599 5 13.909944886069777 37.36264237005849 33.69263332490334 15.034779418968396 6 33.36602814943923 36.46884594134299 16.98114067314867 13.183985236069104 7 29.504521438384725 30.941721404664747 21.106197412219846 18.447559744730686 8 27.66635870574391 33.522021104626596 19.624591458128513 19.187028731500984 9 27.600391884348554 13.99243572071405 18.498991809161435 39.908180585775966 10 15.394316088542977 27.219071075664353 32.31196692682138 25.074645908971295 11 37.034897894552174 21.243583521869 22.857129837847936 18.864388745730892 12 24.296494261908506 23.94926966637731 29.512837513015228 22.241398558698954 13 29.406129067903674 19.81916504237216 25.55726307419428 25.21744281552989 14 23.325013414018702 19.62023802336033 26.007931074158165 31.046817488462803 15 24.963601440904462 27.60913301936016 22.57690406046148 24.850361479273896 16 25.315926476535488 25.965266029858224 24.19120201864858 24.52760547495771 17 23.606146148746095 26.079779635414173 25.661469689616755 24.652604526222976 18 24.26886727970326 25.486434514750243 26.646472609293976 23.59822559625252 19 25.27870241895245 25.067952582425967 25.970759314573183 23.6825856840484 20 25.5700537244877 24.47665331528847 25.6584553412348 24.294837618989032 21 26.372095354617926 24.45882859544917 25.063509748034328 24.10556630189857 22 25.390172883611147 24.62349740720151 25.677135071586754 24.30919463760059 23 24.309250023353464 24.463952500187965 25.919044353359595 25.30775312309897 24 24.36908544302716 25.119245215097063 25.9190738802 24.592595461675778 25 24.710813095376427 24.588804359961085 26.064301223732805 24.63608132092968 26 24.190909753741273 25.418102112611873 26.204749275441568 24.186238858205282 27 24.728885911637143 25.13537191532605 25.613858803076443 24.521883369960364 28 24.26542962341876 25.14240275600598 26.12258940614633 24.46957821442893 29 24.163963896227287 25.171707091454458 25.857851932609027 24.80647707970923 30 24.22267765943752 25.46261117421157 25.901668852081766 24.413042314269145 31 24.711478211335802 25.122529193961835 25.371802905155228 24.79418968954714 32 24.50873953198533 25.35814252335118 25.34709208207402 24.786025862589472 33 24.384811684021056 24.880721820957415 25.684453963407687 25.050012531613845 34 24.797873758391784 25.17005717748945 25.76040137025472 24.271667693864043 35 25.214115320381225 24.931248419340214 25.778709908202114 24.075926352076447 36 24.366594323017242 25.525345910874904 25.50335799853034 24.604701767577513 37 25.10498098608076 25.28384170029324 25.305601188455395 24.3055761251706 38 24.57450529369075 25.183795256698144 25.69237236867739 24.549327080933715 39 24.86602687664903 25.142403404922376 25.2570096652039 24.734560053224698 40 25.177090049920142 25.41381769465096 25.49800524491856 23.911087010510343 41 24.15583646239656 25.48280230396267 26.069843425321714 24.291517808319053 42 25.264893080141764 25.578629470942932 25.41549566134697 23.740981787568337 43 24.58091394082727 24.934979716405618 25.762158479750013 24.721947863017103 44 24.45190240701565 25.51056095346482 25.242393276897367 24.795143362622166 45 24.613982524692133 25.631628712363725 25.225048700743898 24.529340062200248 46 24.31844668157496 25.380976087107587 25.23504490146512 25.065532329852324 47 24.56023631779868 25.46795913880253 25.604436540856074 24.367368002542715 48 25.2404864867328 25.574843586951072 24.79744908886266 24.387220837453462 49 24.609343405288346 25.80207491994345 24.986643001901307 24.601938672866897 50 24.569979505745568 25.91332718923408 24.86127360570148 24.65541969931887 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 41.0 2 32.0 3 96.0 4 160.0 5 176.0 6 192.0 7 171.5 8 151.0 9 227.5 10 304.0 11 457.0 12 610.0 13 1083.5 14 1557.0 15 2076.0 16 2595.0 17 2802.0 18 3009.0 19 3060.0 20 3111.0 21 3497.5 22 3884.0 23 4441.0 24 4998.0 25 5595.0 26 6192.0 27 7746.0 28 9300.0 29 10997.5 30 12695.0 31 14201.0 32 15707.0 33 18207.0 34 20707.0 35 23951.0 36 27195.0 37 30732.5 38 34270.0 39 37190.0 40 40110.0 41 43491.0 42 46872.0 43 48609.0 44 50346.0 45 54463.5 46 58581.0 47 61310.0 48 64039.0 49 65908.0 50 67777.0 51 66316.5 52 64856.0 53 63762.0 54 62668.0 55 61775.0 56 60882.0 57 58232.0 58 55582.0 59 50335.5 60 45089.0 61 39765.5 62 34442.0 63 29929.0 64 25416.0 65 21392.0 66 17368.0 67 14996.0 68 12624.0 69 11228.0 70 9832.0 71 7644.0 72 5456.0 73 4501.0 74 3546.0 75 2786.5 76 2027.0 77 1743.5 78 1460.0 79 1205.5 80 951.0 81 722.0 82 493.0 83 416.5 84 340.0 85 248.0 86 156.0 87 117.0 88 78.0 89 57.5 90 37.0 91 30.0 92 23.0 93 18.5 94 14.0 95 13.0 96 12.0 97 12.0 98 12.0 99 11.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010708370072156187 2 4.5567532221941223E-4 3 1.1391883055485306E-4 4 0.0 5 0.0 6 3.417564916645592E-4 7 0.0 8 1.1391883055485306E-4 9 9.113506444388245E-4 10 7.974318138839713E-4 11 0.0 12 0.0 13 1.1391883055485306E-4 14 5.695941527742652E-4 15 0.00410107789997471 16 3.417564916645592E-4 17 0.0 18 2.2783766110970612E-4 19 0.0 20 6.835129833291184E-4 21 0.0 22 2.2783766110970612E-4 23 4.5567532221941223E-4 24 5.695941527742652E-4 25 0.0013670259666582368 26 0.0047845908833038285 27 0.005809860358297505 28 0.0029618895944261794 29 0.001708782458322796 30 0.0033036460860907386 31 0.0077464804777300075 32 0.0028479707638713265 33 0.004328915561084416 34 0.0028479707638713265 35 0.002278376611097061 36 0.007176886324955743 37 0.004556753222194122 38 0.00854391229161398 39 0.003417564916645592 40 0.001822701288877649 41 0.0029618895944261794 42 0.0012531071361033836 43 0.001708782458322796 44 0.0010252694749936775 45 9.113506444388245E-4 46 7.974318138839713E-4 47 0.0019366201194325019 48 0.0015948636277679426 49 1.1391883055485306E-4 50 0.0012531071361033836 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 877818.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.082645639819965 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6909362923259 49.28815867889431 2 11.937590888939106 14.583592681244214 3 3.221082374638425 5.902566998001262 4 1.3287560843974324 3.2465574818001235 5 0.6727631374317742 2.0547076161639275 6 0.44233813724957033 1.6211510214356133 7 0.2794626576193237 1.1949222939446438 8 0.20634241207781473 1.0083152349931892 9 0.17017600618082787 0.935532061374899 >10 0.9241069869541254 10.243033919775417 >50 0.07373080924444497 3.140027957341604 >100 0.05008788207490518 5.807092062394037 >500 0.0026263308663884684 0.9743419926367307 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 1.1391883055485306E-4 11 0.0 0.0 0.0 0.0 1.1391883055485306E-4 12 0.0 0.0 0.0 0.0 2.2783766110970612E-4 13 0.0 0.0 0.0 0.0 2.2783766110970612E-4 14 0.0 0.0 0.0 0.0 2.2783766110970612E-4 15 0.0 0.0 0.0 0.0 3.417564916645592E-4 16 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 17 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 18 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 19 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 20 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 21 0.0 0.0 0.0 1.1391883055485306E-4 3.417564916645592E-4 22 0.0 0.0 0.0 2.2783766110970612E-4 3.417564916645592E-4 23 0.0 0.0 0.0 6.835129833291184E-4 3.417564916645592E-4 24 0.0 0.0 0.0 0.0015948636277679428 3.417564916645592E-4 25 0.0 0.0 0.0 0.001822701288877649 3.417564916645592E-4 26 0.0 0.0 0.0 0.0019366201194325019 4.5567532221941223E-4 27 0.0 0.0 0.0 0.0027340519333164735 4.5567532221941223E-4 28 0.0 0.0 0.0 0.004328915561084416 4.5567532221941223E-4 29 0.0 0.0 0.0 0.00706296749440089 4.5567532221941223E-4 30 0.0 0.0 0.0 0.013898097327692073 4.5567532221941223E-4 31 0.0 0.0 0.0 0.02756835699427444 4.5567532221941223E-4 32 0.0 0.0 0.0 0.043516993271953866 4.5567532221941223E-4 33 0.0 0.0 0.0 0.05741509059964594 4.5567532221941223E-4 34 0.0 0.0 0.0 0.07461683401342875 4.5567532221941223E-4 35 0.0 0.0 0.0 0.09956505790494156 4.5567532221941223E-4 36 0.0 0.0 0.0 0.12519679477978352 4.5567532221941223E-4 37 0.0 0.0 0.0 0.16837203156007283 4.5567532221941223E-4 38 0.0 0.0 0.0 0.2269263104652673 4.5567532221941223E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTATA 50 0.002581607 21.997465 2 GTATCAA 1865 0.0 21.111645 1 TAATACC 105 7.7494406E-8 20.949968 4 AGGCGTA 65 4.9307273E-4 20.307665 12 TAACGGC 55 0.004479728 20.002253 36 GTCGAAC 55 0.0044812053 20.001114 23 TCTAGAT 210 0.0 19.90247 2 CCGATCG 190 1.8189894E-12 18.523127 18 TTAACGG 60 0.007405712 18.335398 35 TCGAATT 60 0.0074130166 18.332266 42 CGACGGT 195 1.8189894E-12 18.05023 7 CTAGATA 200 3.6379788E-12 17.597973 3 ACTAGAC 75 0.0012914856 17.597973 3 TACGACG 200 3.6379788E-12 17.597973 5 CTAGGAC 175 1.9099389E-10 17.597973 3 CGTCGTA 140 8.364441E-8 17.285692 10 TCGCACG 205 5.456968E-12 17.171688 22 CGATCGC 205 5.456968E-12 17.167774 19 ACGGTAT 220 1.8189894E-12 16.999977 9 TAGAACA 415 0.0 16.9619 4 >>END_MODULE