##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063950_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1884921 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35767440651359 32.0 32.0 32.0 32.0 32.0 2 31.432071688946117 32.0 32.0 32.0 32.0 32.0 3 31.505620659964 32.0 32.0 32.0 32.0 32.0 4 31.58173419469569 32.0 32.0 32.0 32.0 32.0 5 31.543058303239235 32.0 32.0 32.0 32.0 32.0 6 35.1371930176384 36.0 36.0 36.0 36.0 36.0 7 35.15953931225765 36.0 36.0 36.0 36.0 36.0 8 35.10029545004804 36.0 36.0 36.0 36.0 36.0 9 35.200153215970325 36.0 36.0 36.0 36.0 36.0 10 35.07004166222351 36.0 36.0 36.0 36.0 36.0 11 35.205909425381755 36.0 36.0 36.0 36.0 36.0 12 35.11470507252028 36.0 36.0 36.0 36.0 36.0 13 35.15707554852432 36.0 36.0 36.0 36.0 36.0 14 35.10067318471172 36.0 36.0 36.0 36.0 36.0 15 35.07507529493279 36.0 36.0 36.0 36.0 36.0 16 35.08950030266521 36.0 36.0 36.0 36.0 36.0 17 35.057643795151094 36.0 36.0 36.0 36.0 36.0 18 35.05961470003252 36.0 36.0 36.0 36.0 36.0 19 35.05594398916453 36.0 36.0 36.0 36.0 36.0 20 35.04683220145566 36.0 36.0 36.0 36.0 36.0 21 35.04418487565261 36.0 36.0 36.0 36.0 36.0 22 35.02197545679633 36.0 36.0 36.0 36.0 36.0 23 34.97564354155956 36.0 36.0 36.0 36.0 36.0 24 34.94964987922571 36.0 36.0 36.0 36.0 36.0 25 34.92424457046211 36.0 36.0 36.0 36.0 36.0 26 34.87180364588224 36.0 36.0 36.0 32.0 36.0 27 34.85748845707592 36.0 36.0 36.0 32.0 36.0 28 34.843377520861615 36.0 36.0 36.0 32.0 36.0 29 34.81117192709933 36.0 36.0 36.0 32.0 36.0 30 34.797218557170304 36.0 36.0 36.0 32.0 36.0 31 34.78719108121773 36.0 36.0 36.0 32.0 36.0 32 34.75340292776196 36.0 36.0 36.0 32.0 36.0 33 34.73412731886376 36.0 36.0 36.0 32.0 36.0 34 34.73447163037602 36.0 36.0 36.0 32.0 36.0 35 34.70155407043584 36.0 36.0 36.0 32.0 36.0 36 34.66923335248533 36.0 36.0 36.0 32.0 36.0 37 34.6572742305911 36.0 36.0 36.0 32.0 36.0 38 34.61203148566969 36.0 36.0 36.0 32.0 36.0 39 34.5954912699259 36.0 36.0 36.0 32.0 36.0 40 34.588013502953174 36.0 36.0 36.0 32.0 36.0 41 34.57769742074071 36.0 36.0 36.0 32.0 36.0 42 34.532604814737596 36.0 36.0 36.0 32.0 36.0 43 34.52543528349464 36.0 36.0 36.0 32.0 36.0 44 34.46803499987533 36.0 36.0 36.0 32.0 36.0 45 34.44707974498666 36.0 36.0 36.0 32.0 36.0 46 34.4152619658861 36.0 36.0 36.0 32.0 36.0 47 34.40282643145257 36.0 36.0 36.0 32.0 36.0 48 34.35727916448488 36.0 36.0 36.0 32.0 36.0 49 34.34350617346828 36.0 36.0 36.0 32.0 36.0 50 33.77043812446251 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 4.0 19 4.0 20 18.0 21 55.0 22 174.0 23 512.0 24 1450.0 25 3221.0 26 6570.0 27 12020.0 28 19944.0 29 30678.0 30 44639.0 31 63483.0 32 91816.0 33 149180.0 34 313251.0 35 1147898.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.5639424788551 17.91070671548702 11.866190065117976 26.659160740539907 2 15.742044464628094 19.982980655881384 37.59274958963645 26.682225289854074 3 18.670145518652586 23.474876559289473 28.618721394568343 29.236256527489594 4 12.34629992450612 15.966080276043398 35.796566540454485 35.891053258996 5 14.15847136299081 36.864621912536386 33.86072944171135 15.116177282761454 6 34.87297835711425 35.56696190544401 16.46779828268118 13.092261454760559 7 30.470805376782767 30.111214328042745 20.519608534902563 18.898371760271925 8 27.721813127347577 34.38326295015173 18.95385480550899 18.941069116991702 9 27.03167136101914 14.216062590423096 18.313120825682574 40.4391452228752 10 15.614139053014286 27.474299793040185 32.04566591349069 24.865895240454833 11 37.227661000116186 21.03679676760989 22.63856151000493 19.096980722268995 12 24.50751121004862 23.4111758826388 29.34825742897827 22.733055478334315 13 29.82084025231974 19.82147688749065 25.046288682218247 25.311394177971362 14 23.10016833632462 19.709886430012567 25.233418765919136 31.95652646774367 15 24.87959202946454 28.052324810249345 21.86071829893434 25.20736486135177 16 25.417527009275787 26.003603358890725 24.26776267064493 24.311106961188557 17 23.827417700794886 26.254309862323144 25.44976686025568 24.46850557662629 18 24.428647673050335 25.436439009949524 26.51250932403282 23.62240399296732 19 25.565382085181334 24.993474524117733 25.147114996922948 24.294028393777985 20 25.564536836811136 24.967266306896676 25.07538829481333 24.392808561478862 21 25.97217602223117 24.641669332560888 24.63853922790398 24.74761541730396 22 25.59174925195764 25.062814336947987 25.122286356980666 24.223150054113702 23 24.576915465855876 24.836503869952203 25.474041955385594 25.112538708806326 24 24.884517093910535 25.02908625393984 25.530064814731308 24.55633183741832 25 24.87330812228631 24.979892704500216 25.4472944811575 24.699504692055974 26 24.299844389231716 25.729839969737338 25.829212274203893 24.141103366827053 27 24.723009950578703 25.26868684725026 25.348111087825597 24.66019211434544 28 24.464640516113974 25.222735966427123 25.482490695570746 24.830132821888157 29 24.39704256407318 25.002387424955273 25.428357090864335 25.172212920107214 30 24.32529221111673 25.38781538931683 25.57520400795181 24.711688391614626 31 25.087742103210708 24.904432070501407 25.064131983223554 24.94369384306433 32 24.750923541923207 25.349004145128852 24.99088793190805 24.909184381039896 33 24.384332762988606 25.138885572931173 25.451911981218416 25.024869682861805 34 24.802186270130207 25.259516121673087 25.665807537347717 24.27249007084899 35 24.945805281000812 25.033397528742036 25.82639651540955 24.194400674847603 36 24.225912274567627 25.3972506946482 25.552707576055823 24.824129454728354 37 24.98178899211555 25.083547806747386 25.143340394906964 24.791322806230102 38 24.554601062940804 25.27076233664461 25.293523722510585 24.881112877904 39 25.33343519825726 24.80310093805923 24.9945221076065 24.868941756077014 40 25.57451933279572 24.841422265608422 25.340552183693394 24.243506217902468 41 24.632108150150064 25.001153931244797 26.02340437835999 24.343333540245144 42 25.22588911259838 25.390143165232892 25.44850216326195 23.935465558906778 43 24.527517092572854 24.767213667904056 25.83184208250592 24.873427157017172 44 24.06494791487059 25.445873642828907 25.459826674695407 25.02935176760509 45 24.327442999507664 25.33412984058537 25.4742436717994 24.864183488107567 46 24.486525028887442 24.887766048314447 25.478459888100286 25.14724903469783 47 24.76891089560656 24.92329746365682 25.742182919964623 24.565608720771998 48 24.723244687454574 25.25776204083235 25.132077513770124 24.886915757942955 49 24.6650641170176 25.164344455155224 25.31358211227786 24.857009315549313 50 24.346288459120448 25.677665180639092 25.11492707005339 24.861119290187073 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 11.0 2 15.0 3 75.5 4 136.0 5 179.5 6 223.0 7 209.5 8 196.0 9 251.5 10 307.0 11 473.0 12 639.0 13 1176.5 14 1714.0 15 2326.5 16 2939.0 17 3009.5 18 3080.0 19 3298.5 20 3517.0 21 4256.5 22 4996.0 23 6150.0 24 7304.0 25 9600.0 26 11896.0 27 15856.5 28 19817.0 29 23637.0 30 27457.0 31 31898.5 32 36340.0 33 42403.0 34 48466.0 35 56223.0 36 63980.0 37 71643.5 38 79307.0 39 83259.0 40 87211.0 41 92229.5 42 97248.0 43 99853.5 44 102459.0 45 110166.0 46 117873.0 47 125058.5 48 132244.0 49 136819.5 50 141395.0 51 140549.0 52 139703.0 53 138782.0 54 137861.0 55 136210.5 56 134560.0 57 129912.0 58 125264.0 59 115041.0 60 104818.0 61 91885.0 62 78952.0 63 68794.0 64 58636.0 65 49031.5 66 39427.0 67 33485.5 68 27544.0 69 23283.0 70 19022.0 71 14561.5 72 10101.0 73 8534.0 74 6967.0 75 5581.5 76 4196.0 77 3557.0 78 2918.0 79 2405.0 80 1892.0 81 1482.5 82 1073.0 83 857.5 84 642.0 85 459.0 86 276.0 87 202.5 88 129.0 89 98.0 90 67.0 91 52.0 92 37.0 93 34.5 94 32.0 95 25.0 96 18.0 97 14.5 98 11.0 99 10.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00997389280505655 2 3.7136834912444605E-4 3 4.244209704279383E-4 4 0.0 5 0.0 6 3.183157278209538E-4 7 1.0610524260698458E-4 8 5.305262130349229E-5 9 0.0016976838817117533 10 7.427366982488921E-4 11 0.0 12 2.652631065174615E-4 13 5.835788343384153E-4 14 2.1221048521396916E-4 15 0.004191157082975892 16 6.896840769453998E-4 17 0.0 18 3.7136834912444605E-4 19 5.305262130349229E-5 20 6.896840769453998E-4 21 0.0 22 5.305262130349229E-5 23 7.427366982488921E-4 24 5.30526213034923E-4 25 0.0017507365030152457 26 0.0047747359173143065 27 0.005623577858170184 28 0.0035014730060304914 29 0.0023873679586571533 30 0.0036075782486374762 31 0.0072151564972749525 32 0.0030770520356025533 33 0.005093051645135261 34 0.0035545256273339836 35 0.002705683686478107 36 0.008170103680737813 37 0.0038197887338514455 38 0.007957893195523844 39 0.0038197887338514455 40 0.0021751574734431844 41 0.0031831572782095377 42 0.0019098943669257227 43 0.0020159996095327074 44 0.0013793681538907996 45 0.0013263155325873074 46 0.0010079998047663537 47 0.002228210094746676 48 0.002281262716050169 49 4.244209704279383E-4 50 0.0015915786391047688 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1884921.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.17611694224275 #Duplication Level Percentage of deduplicated Percentage of total 1 73.9629119057118 40.07023364792641 2 14.45825375135899 15.665840920284888 3 5.076844268202506 8.251311263150814 4 2.231539785029786 4.835846414201636 5 1.1996244477292195 3.2495497183475783 6 0.6979207338846484 2.268638117721035 7 0.47129627145122205 1.787310134160907 8 0.31103525840656676 1.3480546026075881 9 0.25855794831845197 1.260689908000213 >10 1.2073470130442396 11.492180963200564 >50 0.07117232506324875 2.660053078054027 >100 0.04886676948473429 5.136686953071943 >500 0.0037430180416177126 1.4232107432456005 >1k 8.865042730147214E-4 0.5503935360268138 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.591578639104769E-4 2 0.0 0.0 0.0 0.0 1.591578639104769E-4 3 0.0 0.0 0.0 0.0 1.591578639104769E-4 4 0.0 0.0 0.0 0.0 1.591578639104769E-4 5 0.0 0.0 0.0 0.0 1.591578639104769E-4 6 0.0 0.0 0.0 0.0 3.7136834912444605E-4 7 0.0 0.0 0.0 0.0 3.7136834912444605E-4 8 0.0 0.0 0.0 0.0 3.7136834912444605E-4 9 0.0 0.0 0.0 0.0 4.2442097042793837E-4 10 0.0 0.0 0.0 0.0 4.2442097042793837E-4 11 0.0 0.0 0.0 1.0610524260698459E-4 4.2442097042793837E-4 12 0.0 0.0 0.0 1.591578639104769E-4 9.018945621593691E-4 13 0.0 0.0 0.0 1.591578639104769E-4 0.0010079998047663537 14 0.0 0.0 0.0 1.591578639104769E-4 0.001061052426069846 15 0.0 0.0 0.0 2.652631065174615E-4 0.0012732629112838152 16 0.0 0.0 0.0 3.7136834912444605E-4 0.0013793681538907996 17 0.0 0.0 0.0 3.7136834912444605E-4 0.001432420775194292 18 0.0 0.0 0.0 4.2442097042793837E-4 0.001432420775194292 19 0.0 0.0 0.0 4.2442097042793837E-4 0.001432420775194292 20 0.0 0.0 0.0 4.2442097042793837E-4 0.0015385260178012766 21 0.0 0.0 0.0 5.30526213034923E-4 0.0015915786391047688 22 0.0 0.0 0.0 5.30526213034923E-4 0.0015915786391047688 23 0.0 0.0 0.0 5.835788343384153E-4 0.001644631260408261 24 0.0 0.0 0.0 9.018945621593691E-4 0.0016976838817117535 25 0.0 0.0 0.0 9.549471834628613E-4 0.0016976838817117535 26 0.0 0.0 0.0 0.0013263155325873074 0.0019098943669257225 27 0.0 0.0 0.0 0.0018568417456222303 0.0019629469882292147 28 0.0 0.0 0.0 0.004350314946886368 0.0019629469882292147 29 0.0 0.0 0.0 0.011512418822857829 0.0019629469882292147 30 0.0 0.0 0.0 0.02238820619007375 0.0019629469882292147 31 0.0 0.0 0.0 0.046580201504466234 0.0020690522308361996 32 0.0 0.0 0.0 0.07331872264142635 0.0020690522308361996 33 0.0 0.0 0.0 0.10148966455358076 0.0020690522308361996 34 0.0 0.0 0.0 0.13167660607526788 0.002334315337353661 35 0.0 0.0 0.0 0.16568333633080642 0.002334315337353661 36 0.0 0.0 0.0 0.21693216850997998 0.002334315337353661 37 0.0 0.0 0.0 0.2920016276544216 0.002334315337353661 38 0.0 0.0 0.0 0.39412792366364424 0.0025465258225676303 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2135 0.0 28.336245 1 ACGTAAC 65 1.8145807E-5 23.691477 1 GGTATCA 1005 0.0 22.98427 1 ATTCGAC 50 0.0025791072 22.002733 27 TAAGCGT 55 0.004481992 20.001953 30 TCAACGC 3090 0.0 19.434668 4 ATCAACG 3145 0.0 19.024849 3 CAACGCA 3150 0.0 18.99465 5 GATTTCG 475 0.0 18.987803 41 TATCAAC 3220 0.0 18.718351 2 AACGCAG 3245 0.0 18.438566 6 ATTTCGT 490 0.0 18.406544 42 TAGGACG 850 0.0 18.374365 4 CGGATTA 60 0.007412828 18.333666 20 GTCCTAC 1070 0.0 18.298424 1 TTAGGAC 535 0.0 18.091385 3 TGTAGGA 1190 0.0 17.191307 2 GTAGGAC 1125 0.0 16.815851 3 TCTAGCG 315 0.0 16.763542 28 GATATAC 620 0.0 16.676838 1 >>END_MODULE