##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063949_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 859774 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.102851447008167 32.0 32.0 32.0 32.0 32.0 2 30.669908603888928 32.0 32.0 32.0 32.0 32.0 3 30.687467869463372 32.0 32.0 32.0 32.0 32.0 4 30.69580261789726 32.0 32.0 32.0 32.0 32.0 5 30.628352334450682 32.0 32.0 32.0 32.0 32.0 6 34.041534170607626 36.0 36.0 36.0 32.0 36.0 7 34.00499549881713 36.0 36.0 36.0 32.0 36.0 8 33.956024490156715 36.0 36.0 36.0 32.0 36.0 9 34.17316411056859 36.0 36.0 36.0 32.0 36.0 10 33.782499819720066 36.0 36.0 36.0 32.0 36.0 11 34.161876260505665 36.0 36.0 36.0 32.0 36.0 12 33.92156659773382 36.0 36.0 36.0 32.0 36.0 13 34.07270050036405 36.0 36.0 36.0 32.0 36.0 14 33.918683281885706 36.0 36.0 36.0 32.0 36.0 15 33.82630900678551 36.0 36.0 36.0 32.0 36.0 16 33.837425881685185 36.0 36.0 36.0 32.0 36.0 17 33.75393301030271 36.0 36.0 36.0 32.0 36.0 18 33.765024297082725 36.0 36.0 36.0 32.0 36.0 19 33.74264864952883 36.0 36.0 36.0 32.0 36.0 20 33.72204207152112 36.0 36.0 36.0 32.0 36.0 21 33.69191089751493 36.0 36.0 36.0 27.0 36.0 22 33.66229381209481 36.0 36.0 36.0 27.0 36.0 23 33.611831713915514 36.0 36.0 36.0 27.0 36.0 24 33.58135858958284 36.0 36.0 36.0 27.0 36.0 25 32.86289536552629 36.0 32.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 8.0 5 6.0 6 30.0 7 17.0 8 44.0 9 68.0 10 70.0 11 25.0 12 59.0 13 45.0 14 134.0 15 316.0 16 512.0 17 666.0 18 866.0 19 1055.0 20 1364.0 21 1681.0 22 2359.0 23 3212.0 24 4436.0 25 6135.0 26 9124.0 27 12796.0 28 18197.0 29 25811.0 30 36805.0 31 54925.0 32 84064.0 33 123095.0 34 230736.0 35 241110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12076642671231 17.760966364115518 11.468011062644495 25.650256146527685 2 16.48364430269468 19.95554423418488 38.24498593164606 25.315825531474378 3 18.738114429475168 24.153689222935213 29.232309909381794 27.875886438207825 4 12.206512155915817 15.433860698392316 36.97696761601683 35.382659529675045 5 14.019178604828616 37.08933730987731 34.403309030508034 14.488175054786042 6 33.53627895290297 36.2380070538531 17.085469807089215 13.140244186154721 7 29.31485973208625 30.9609646291029 21.435310404197278 18.28886523461357 8 27.455714244160678 33.61656825387591 19.846185171180082 19.081532330783325 9 26.941663689710825 14.260180898067093 19.104958347830237 39.693197064391846 10 15.061689316727685 27.16901778877373 32.69301040607188 25.076282488426706 11 36.72898447000774 21.23890818743054 23.163370398170617 18.868736944391106 12 24.25228135797972 23.873810441002412 29.84729652823926 22.026611672778607 13 28.997676973641333 19.890505851791847 25.938521270355576 25.17329590421124 14 22.73212914038314 20.275947952794397 26.10891273480599 30.88301017201648 15 24.512931280279957 28.004022004648117 22.87224199992319 24.61080471514874 16 24.80052046236424 26.255999515848966 24.78527436001285 24.15820566177395 17 23.059716517911696 26.43408209319133 26.302570983994052 24.20363040490292 18 23.972692829248704 25.565960319631248 27.163068972139936 23.298277878980116 19 24.86998687065265 25.44858603447152 26.055236374810274 23.626190720065555 20 24.929433031510406 24.95294565441333 25.912772824995084 24.20484848908118 21 25.858663454207914 24.80378977018117 25.317084810075013 24.020461965535905 22 24.90013129591865 25.08077958115671 25.886713039267722 24.13237608365692 23 23.672971466020083 24.881472177827234 26.352113479404153 25.093442876748522 24 24.055534798291774 25.62757744108332 26.17754793472985 24.139339825895057 25 23.981138861697012 25.440886673704867 26.163834896365007 24.41413956823311 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 68.0 2 221.5 3 375.0 4 375.0 5 375.0 6 1067.5 7 1760.0 8 1760.0 9 1760.0 10 1928.0 11 2096.0 12 2096.0 13 2096.0 14 2496.5 15 2897.0 16 2897.0 17 2897.0 18 4778.5 19 6660.0 20 6660.0 21 6660.0 22 10896.0 23 15132.0 24 15132.0 25 15132.0 26 22085.0 27 29038.0 28 29038.0 29 29038.0 30 36387.5 31 43737.0 32 43737.0 33 43737.0 34 52644.0 35 61551.0 36 61551.0 37 61551.0 38 69148.5 39 76746.0 40 76746.0 41 76746.0 42 86208.5 43 95671.0 44 95671.0 45 95671.0 46 104762.0 47 113853.0 48 113853.0 49 113853.0 50 113759.5 51 113666.0 52 113666.0 53 113666.0 54 103850.0 55 94034.0 56 94034.0 57 94034.0 58 84479.0 59 74924.0 60 74924.0 61 74924.0 62 65411.0 63 55898.0 64 55898.0 65 55898.0 66 45459.0 67 35020.0 68 35020.0 69 35020.0 70 26147.5 71 17275.0 72 17275.0 73 17275.0 74 13217.5 75 9160.0 76 9160.0 77 9160.0 78 7548.0 79 5936.0 80 5936.0 81 5936.0 82 4041.5 83 2147.0 84 2147.0 85 2147.0 86 1630.5 87 1114.0 88 1114.0 89 1114.0 90 773.0 91 432.0 92 432.0 93 432.0 94 281.0 95 130.0 96 130.0 97 130.0 98 292.0 99 454.0 100 454.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03547443863154736 2 0.00500131429887389 3 0.0015120252531479201 4 0.003256669776010905 5 0.007676435900597134 6 0.011863582755468298 7 0.019656328290922963 8 0.03477658082240217 9 0.04594230576872527 10 0.05443290911332513 11 0.05454921874818266 12 0.061295177569919534 13 0.06397029917164279 14 0.06443553771107291 15 0.05827112706362369 16 0.0625745835533524 17 0.06176041610934966 18 0.0766480493711138 19 0.07327506996024537 20 0.07688066864082888 21 0.07199566397681251 22 0.07513602411796588 23 0.0806025769562699 24 0.0740892374042481 25 0.07595019156196861 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 859774.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.67138322616735 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4989775962407 48.03485341459939 2 12.35837121591073 14.7488220975169 3 3.421376575111105 6.124748183234599 4 1.3131655127430648 3.134336102011119 5 0.6292424409948465 1.8773883419386244 6 0.38060124554185765 1.3626601667450884 7 0.23799209980281721 0.9940922454493921 8 0.16793398287340797 0.8016682438988602 9 0.13771459703259475 0.7395858445832254 >10 0.7032485281162697 7.8416577967252685 >50 0.07373387859047875 3.1308343785941504 >100 0.07138400347233734 8.308169245050632 >500 0.00567160573518543 2.3470881494085343 >1k 5.867178346743548E-4 0.5540957902442184 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2006 0.23331712752420986 No Hit TATCAACGCAGAGTACTTTTTTTTT 1497 0.1741155233817259 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1245 0.14480549539762777 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 934 0.10863319895693518 No Hit GCGCAAGACGGACCAGAGCGAAAGC 911 0.10595807735521195 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 910 0.10584176772035442 No Hit GAACTACGACGGTATCTGATCGTCT 886 0.10305033648377365 No Hit GAATAGGACCGCGGTTCTATTTTGT 877 0.10200354977005585 No Hit GTATCTGATCGTCTTCGAACCTCCG 863 0.1003752148820504 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1630963485753232E-4 2 0.0 0.0 0.0 0.0 1.1630963485753232E-4 3 0.0 0.0 0.0 0.0 1.1630963485753232E-4 4 0.0 0.0 0.0 0.0 1.1630963485753232E-4 5 0.0 0.0 0.0 0.0 1.1630963485753232E-4 6 0.0 0.0 0.0 0.0 2.3261926971506464E-4 7 0.0 0.0 0.0 0.0 2.3261926971506464E-4 8 0.0 0.0 0.0 0.0 2.3261926971506464E-4 9 0.0 0.0 0.0 1.1630963485753232E-4 2.3261926971506464E-4 10 0.0 0.0 0.0 3.48928904572597E-4 4.652385394301293E-4 11 0.0 0.0 0.0 4.652385394301293E-4 4.652385394301293E-4 12 0.0 0.0 0.0 4.652385394301293E-4 0.0011630963485753233 13 0.0 0.0 0.0 4.652385394301293E-4 0.0011630963485753233 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTTATA 25 0.006050337 18.98889 2 TCTAGTA 35 0.00217763 16.276192 2 CGCCAGT 150 0.0 15.836972 18 CGTTATT 55 1.13340375E-5 15.536365 2 CGCATCG 150 0.0 15.201723 13 ATCGCCA 165 0.0 14.973137 16 GCATCGC 165 0.0 14.396409 14 TCCAACG 40 0.005268524 14.253274 18 TCGCCAG 170 0.0 13.974612 17 CGGTCCA 90 3.6314304E-8 13.72218 10 TTGCGCG 70 7.236311E-6 13.574547 18 CGTCGTA 130 1.4551915E-11 13.153806 10 GTCTTAA 65 5.4649845E-5 13.149215 1 CCGCATC 175 0.0 13.030047 12 CATCGCC 190 0.0 13.002231 15 TCTTATA 95 7.428207E-8 12.992398 2 CCGTCGT 125 1.0186341E-10 12.91996 9 TTTGCGC 75 1.4723946E-5 12.670315 17 CGAACGA 60 4.0807985E-4 12.669578 16 GTTATTC 75 1.4812333E-5 12.662944 3 >>END_MODULE