##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063949_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 859774 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.042571652550553 32.0 32.0 32.0 32.0 32.0 2 30.802612081779632 32.0 32.0 32.0 32.0 32.0 3 31.140624164024498 32.0 32.0 32.0 32.0 32.0 4 31.33824935389998 32.0 32.0 32.0 32.0 32.0 5 31.180313663823284 32.0 32.0 32.0 32.0 32.0 6 34.78590769202139 36.0 36.0 36.0 32.0 36.0 7 34.81704610746545 36.0 36.0 36.0 32.0 36.0 8 34.72373670290099 36.0 36.0 36.0 32.0 36.0 9 34.94665691216529 36.0 36.0 36.0 32.0 36.0 10 34.66757659571004 36.0 36.0 36.0 32.0 36.0 11 34.95646065128743 36.0 36.0 36.0 36.0 36.0 12 34.79793876065106 36.0 36.0 36.0 32.0 36.0 13 34.883674081793586 36.0 36.0 36.0 32.0 36.0 14 34.818753532905156 36.0 36.0 36.0 32.0 36.0 15 34.73811955234748 36.0 36.0 36.0 32.0 36.0 16 34.77815216556909 36.0 36.0 36.0 32.0 36.0 17 34.73475471461105 36.0 36.0 36.0 32.0 36.0 18 34.74331045135117 36.0 36.0 36.0 32.0 36.0 19 34.74205430729471 36.0 36.0 36.0 32.0 36.0 20 34.729639416870015 36.0 36.0 36.0 32.0 36.0 21 34.73314266307192 36.0 36.0 36.0 32.0 36.0 22 34.71079725602309 36.0 36.0 36.0 32.0 36.0 23 34.66280324829548 36.0 36.0 36.0 32.0 36.0 24 34.62293230546632 36.0 36.0 36.0 32.0 36.0 25 34.583230011607704 36.0 36.0 36.0 32.0 36.0 26 34.52396560026239 36.0 36.0 36.0 32.0 36.0 27 34.51921784096751 36.0 36.0 36.0 32.0 36.0 28 34.492924884911616 36.0 36.0 36.0 32.0 36.0 29 34.45789707527792 36.0 36.0 36.0 32.0 36.0 30 34.434692140027494 36.0 36.0 36.0 32.0 36.0 31 34.42705524940275 36.0 36.0 36.0 32.0 36.0 32 34.37958928741739 36.0 36.0 36.0 32.0 36.0 33 34.358811734246444 36.0 36.0 36.0 32.0 36.0 34 34.33294679764683 36.0 36.0 36.0 32.0 36.0 35 34.306617785604125 36.0 36.0 36.0 32.0 36.0 36 34.258406278859326 36.0 36.0 36.0 32.0 36.0 37 34.256488332980524 36.0 36.0 36.0 32.0 36.0 38 34.2084291918574 36.0 36.0 36.0 32.0 36.0 39 34.202891690141826 36.0 36.0 36.0 32.0 36.0 40 34.19076641070793 36.0 36.0 36.0 32.0 36.0 41 34.169318914040204 36.0 36.0 36.0 32.0 36.0 42 34.08696704017567 36.0 36.0 36.0 32.0 36.0 43 34.07225619755889 36.0 36.0 36.0 32.0 36.0 44 34.00971766999235 36.0 36.0 36.0 32.0 36.0 45 33.973587245020205 36.0 36.0 36.0 32.0 36.0 46 33.950816144707794 36.0 36.0 36.0 32.0 36.0 47 33.92487676994187 36.0 36.0 36.0 32.0 36.0 48 33.870254276123724 36.0 36.0 36.0 32.0 36.0 49 33.86243129008321 36.0 36.0 36.0 32.0 36.0 50 33.13196723790205 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 1.0 19 3.0 20 3.0 21 18.0 22 70.0 23 229.0 24 593.0 25 1363.0 26 3108.0 27 5912.0 28 10567.0 29 17160.0 30 26736.0 31 41169.0 32 62340.0 33 106109.0 34 203724.0 35 380667.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.44383986116556 19.151732697163872 12.34074923609649 26.06367820557408 2 15.623051800020471 20.95297801267319 37.452196406472446 25.9717737808339 3 18.092354717297145 24.886597842218634 29.372554584238614 27.64849285624561 4 12.088641898917622 16.415825554157255 37.022985110040544 34.472547436884575 5 14.054507347279635 37.18395764468337 33.708625755140304 15.05290925289669 6 33.7425111046753 36.99964990759189 16.43259325426595 12.825245733466856 7 29.397260210241292 31.1344609164734 21.19266225775611 18.2756166155292 8 27.51176471956584 34.053134893588314 19.356016813720814 19.07908357312503 9 26.91391970150052 13.947150797832435 18.807770012107934 40.33115948855911 10 14.999494050146028 27.37863309796003 32.49989241296208 25.12198043893185 11 37.142784033943805 21.253492196786596 22.815065354383826 18.788658414885774 12 24.08833494422365 23.93050258614774 29.705050053909577 22.276112415719034 13 29.182853128503837 19.87957272393146 25.71565484802948 25.221919299535227 14 22.92782272509456 20.03891729435246 25.759154752655355 31.274105227897632 15 24.590665415138606 28.045743583301636 22.671849574701454 24.691741426858304 16 25.064930080219032 26.295606620832757 24.404637979182827 24.23482531976538 17 23.22342848236862 26.745400535489562 25.783752474487482 24.247418507654338 18 24.26436807010239 25.531333343413536 26.84517156312553 23.359127023358546 19 25.240586479702802 25.45610823309381 25.722340987282706 23.580964299920677 20 25.314474004063882 25.00567012767383 25.538138732613064 24.141717135649227 21 25.995901248467625 24.81791726663053 25.11683302821439 24.069348456687457 22 25.01378269173062 25.159053425667675 25.555669280531863 24.271494602069847 23 23.748288772603612 24.957342895658456 26.083932432542454 25.210435899195478 24 24.321504588436444 25.6162694674157 25.812484734289402 24.24974120985845 25 24.38912900869549 25.369988694466798 25.815114986112338 24.42576731072537 26 24.01091960574035 25.95779179238326 26.169833135210958 23.861455466665426 27 24.482071550953037 25.583007550106256 25.540784648078507 24.394136250862196 28 23.724941697829006 25.510238500950866 26.21602917144037 24.54879062977976 29 23.97112652384237 25.393864037378265 26.01706773240159 24.617941706377778 30 23.89508064009603 25.681073247214876 26.27310856927511 24.150737543413985 31 24.51573730180794 25.41336661591306 25.397082035898194 24.67381404638081 32 24.258123048113102 25.64097494024391 25.236320071649153 24.864581939993833 33 23.843221822487575 25.45243487252497 25.89396524751174 24.810378057475717 34 24.49529108941754 25.41439227312961 26.146230370815804 23.944086266637047 35 25.061994621704862 25.379876987782524 25.870134643478586 23.687993747034028 36 23.97833253074831 26.031321752845688 25.515689955590293 24.474655760815704 37 24.798660060018147 25.78372531230372 25.361853583641565 24.05576104403657 38 24.08523854112748 25.505609482322424 25.863173995731092 24.545977980819004 39 24.645501230030185 25.404688654062006 25.378750428911236 24.571059686996573 40 24.891015083419404 25.58516874633615 25.828262103490307 23.695554066754134 41 23.970312334617812 25.77106627383975 26.243179711335024 24.01544168020741 42 25.1301233714951 26.1541288800027 25.425321688236615 23.290426060265585 43 24.324641821146685 25.450529562694967 25.77596694914663 24.448861667011723 44 24.16433365939218 25.833281962587364 25.369316893143807 24.633067484876648 45 24.294136872603264 26.06299643041164 25.336284534226294 24.306582162758808 46 24.0399970689597 25.659629456024508 25.442941833970522 24.857431641045267 47 24.414164500351845 25.541229768945804 25.773156306156984 24.271449424545366 48 24.98345455031852 26.06492795023687 24.8988953804174 24.05272211902721 49 24.27759581654586 26.211722232043993 25.13212866726838 24.37855328414177 50 24.42481375724762 26.205649218100298 25.02474513384471 24.34479189080737 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 13.5 2 18.0 3 38.0 4 58.0 5 80.0 6 102.0 7 109.5 8 117.0 9 164.5 10 212.0 11 317.5 12 423.0 13 737.0 14 1051.0 15 1457.0 16 1863.0 17 2099.0 18 2335.0 19 2491.5 20 2648.0 21 3208.5 22 3769.0 23 4491.0 24 5213.0 25 6074.5 26 6936.0 27 8679.5 28 10423.0 29 12129.0 30 13835.0 31 15653.0 32 17471.0 33 20157.0 34 22843.0 35 26002.0 36 29161.0 37 33251.5 38 37342.0 39 39944.5 40 42547.0 41 45580.5 42 48614.0 43 49259.5 44 49905.0 45 54046.5 46 58188.0 47 61179.5 48 64171.0 49 64929.5 50 65688.0 51 63116.0 52 60544.0 53 59150.5 54 57757.0 55 57402.5 56 57048.0 57 54425.0 58 51802.0 59 46573.5 60 41345.0 61 36247.5 62 31150.0 63 26960.5 64 22771.0 65 19421.0 66 16071.0 67 13677.5 68 11284.0 69 10552.0 70 9820.0 71 7476.5 72 5133.0 73 4443.0 74 3753.0 75 2904.5 76 2056.0 77 1820.0 78 1584.0 79 1297.5 80 1011.0 81 859.5 82 708.0 83 594.5 84 481.0 85 348.0 86 215.0 87 158.5 88 102.0 89 76.0 90 50.0 91 56.0 92 62.0 93 43.5 94 25.0 95 26.5 96 28.0 97 24.5 98 21.0 99 16.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.005233933568588955 2 6.97857809145194E-4 3 2.3261926971506464E-4 4 0.0 5 0.0 6 1.1630963485753232E-4 7 0.0 8 0.0 9 8.141674440027263E-4 10 5.815481742876617E-4 11 0.0 12 1.1630963485753232E-4 13 2.3261926971506464E-4 14 2.3261926971506464E-4 15 0.002907740871438308 16 3.48928904572597E-4 17 0.0 18 3.48928904572597E-4 19 0.0 20 5.815481742876617E-4 21 0.0 22 0.0 23 0.0012794059834328555 24 4.652385394301293E-4 25 0.0020935734274355818 26 0.0041871468548711635 27 0.005931791377734149 28 0.0033729794108684377 29 0.002675121601723243 30 0.003256669776010905 31 0.007560126265739602 32 0.0033729794108684377 33 0.004303456489728697 34 0.002442502332008179 35 0.002558811966865711 36 0.0060481010125916805 37 0.003954527585156099 38 0.008025364805169731 39 0.004536075759443761 40 0.002558811966865711 41 0.002675121601723243 42 0.0015120252531479201 43 9.304770788602586E-4 44 0.0012794059834328555 45 0.0012794059834328555 46 0.0012794059834328555 47 0.002209883062293114 48 0.002442502332008179 49 6.97857809145194E-4 50 0.0010467867137177909 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 859774.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.05559713526698 #Duplication Level Percentage of deduplicated Percentage of total 1 82.04226277653488 52.55266132479427 2 11.598142851842189 14.85851932069759 3 3.1116717631205653 5.9795997862691035 4 1.1633436637595178 2.9807469222258063 5 0.5707035665288307 1.8278378870615404 6 0.3493063467848522 1.3425015975865409 7 0.21618689129031626 0.9693586290092777 8 0.14924904365372038 0.7648189290485269 9 0.10539128327988416 0.6075811425010552 >10 0.5744206680995722 6.927061312567671 >50 0.06130464803873337 2.774273184416644 >100 0.05436766080626013 6.841697336615329 >500 0.0036488362607584542 1.5733426272066215 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 901 0.10479498100663663 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 881 0.10246878830948598 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.1630963485753232E-4 0.0 6 0.0 0.0 0.0 1.1630963485753232E-4 0.0 7 0.0 0.0 0.0 1.1630963485753232E-4 0.0 8 0.0 0.0 0.0 1.1630963485753232E-4 0.0 9 0.0 0.0 0.0 1.1630963485753232E-4 0.0 10 0.0 0.0 0.0 2.3261926971506464E-4 0.0 11 0.0 0.0 0.0 2.3261926971506464E-4 0.0 12 0.0 0.0 0.0 2.3261926971506464E-4 0.0 13 0.0 0.0 0.0 2.3261926971506464E-4 0.0 14 0.0 0.0 0.0 2.3261926971506464E-4 0.0 15 0.0 0.0 0.0 3.48928904572597E-4 0.0 16 0.0 0.0 0.0 3.48928904572597E-4 0.0 17 0.0 0.0 0.0 3.48928904572597E-4 0.0 18 0.0 0.0 0.0 4.652385394301293E-4 0.0 19 0.0 0.0 0.0 4.652385394301293E-4 1.1630963485753232E-4 20 0.0 0.0 0.0 4.652385394301293E-4 1.1630963485753232E-4 21 0.0 0.0 0.0 6.97857809145194E-4 2.3261926971506464E-4 22 0.0 0.0 0.0 8.141674440027263E-4 2.3261926971506464E-4 23 0.0 0.0 0.0 0.0010467867137177909 2.3261926971506464E-4 24 0.0 0.0 0.0 0.0015120252531479203 2.3261926971506464E-4 25 0.0 0.0 0.0 0.0016283348880054525 2.3261926971506464E-4 26 0.0 0.0 0.0 0.0018609541577205172 2.3261926971506464E-4 27 0.0 0.0 0.0 0.0023261926971506466 2.3261926971506464E-4 28 0.0 0.0 0.0 0.0030240505062958407 2.3261926971506464E-4 29 0.0 0.0 0.0 0.005699172108019084 2.3261926971506464E-4 30 0.0 0.0 0.0 0.009421080423460118 2.3261926971506464E-4 31 0.0 1.1630963485753232E-4 0.0 0.015818110340624397 2.3261926971506464E-4 32 0.0 1.1630963485753232E-4 0.0 0.023610855876079063 2.3261926971506464E-4 33 0.0 2.3261926971506464E-4 0.0 0.030938362872103598 2.3261926971506464E-4 34 0.0 2.3261926971506464E-4 0.0 0.0391963469469884 3.48928904572597E-4 35 0.0 2.3261926971506464E-4 0.0 0.05222302605103202 3.48928904572597E-4 36 0.0 2.3261926971506464E-4 0.0 0.06804113639165642 3.48928904572597E-4 37 0.0 2.3261926971506464E-4 0.0 0.09293139825116833 3.48928904572597E-4 38 0.0 3.48928904572597E-4 0.0 0.1285221465175732 3.48928904572597E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 145 1.2732926E-11 21.240423 10 GTATCAA 1550 0.0 21.147436 1 TCCCCGC 185 0.0 20.21531 1 GTCGTAG 165 3.6379788E-12 19.999102 11 ATACCGT 165 3.6379788E-12 19.999102 6 TACCGTC 165 3.6379788E-12 19.999102 7 GCCGGTC 315 0.0 18.856297 8 CGGTCCA 280 0.0 18.856295 10 CCGTCGT 165 8.185452E-11 18.665829 9 ACGAAAA 260 0.0 18.615631 23 GTCCTAA 130 3.585592E-8 18.614548 1 GTATTAC 180 1.4551915E-11 18.33251 1 GGGTATA 60 0.007412326 18.33251 1 CGGTGCG 60 0.007412326 18.33251 14 TACACGG 60 0.007412326 18.33251 5 CGCCGGT 290 0.0 18.206078 7 ACCGTCG 170 1.2732926E-10 18.116833 8 AACGCAG 1830 0.0 17.671337 6 CCTTATA 100 2.4826197E-5 17.599209 2 TATATGG 75 0.0012908479 17.599209 2 >>END_MODULE