##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063948_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 519220 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.188186125341858 32.0 32.0 32.0 32.0 32.0 2 31.50422942105466 32.0 32.0 32.0 32.0 32.0 3 31.55863410500366 32.0 32.0 32.0 32.0 32.0 4 31.627762798043218 32.0 32.0 32.0 32.0 32.0 5 31.579344016024034 32.0 32.0 32.0 32.0 32.0 6 35.177308270097456 36.0 36.0 36.0 36.0 36.0 7 35.23354647355649 36.0 36.0 36.0 36.0 36.0 8 35.16985670813913 36.0 36.0 36.0 36.0 36.0 9 35.28036285197026 36.0 36.0 36.0 36.0 36.0 10 35.159670274642735 36.0 36.0 36.0 36.0 36.0 11 35.26154038750433 36.0 36.0 36.0 36.0 36.0 12 35.2183929740765 36.0 36.0 36.0 36.0 36.0 13 35.23589615192019 36.0 36.0 36.0 36.0 36.0 14 35.18732907052887 36.0 36.0 36.0 36.0 36.0 15 35.148923385077616 36.0 36.0 36.0 36.0 36.0 16 35.17722160163322 36.0 36.0 36.0 36.0 36.0 17 35.175014444744036 36.0 36.0 36.0 36.0 36.0 18 35.15324525249412 36.0 36.0 36.0 36.0 36.0 19 35.12482762605447 36.0 36.0 36.0 36.0 36.0 20 35.096602596202 36.0 36.0 36.0 36.0 36.0 21 35.06544432032664 36.0 36.0 36.0 36.0 36.0 22 35.02593313046493 36.0 36.0 36.0 36.0 36.0 23 35.05253842301914 36.0 36.0 36.0 36.0 36.0 24 35.022375871499555 36.0 36.0 36.0 36.0 36.0 25 34.967934594198994 36.0 36.0 36.0 36.0 36.0 26 34.94768691498787 36.0 36.0 36.0 36.0 36.0 27 34.866998574785256 36.0 36.0 36.0 36.0 36.0 28 34.801459882130885 36.0 36.0 36.0 32.0 36.0 29 34.758470397904546 36.0 36.0 36.0 32.0 36.0 30 34.698748122183275 36.0 36.0 36.0 32.0 36.0 31 34.68277993913948 36.0 36.0 36.0 32.0 36.0 32 34.61112245291014 36.0 36.0 36.0 32.0 36.0 33 34.654266014406225 36.0 36.0 36.0 32.0 36.0 34 34.585975116520935 36.0 36.0 36.0 32.0 36.0 35 34.55169292400139 36.0 36.0 36.0 32.0 36.0 36 34.45171603559185 36.0 36.0 36.0 32.0 36.0 37 34.34915642694811 36.0 36.0 36.0 32.0 36.0 38 34.27553252956358 36.0 36.0 36.0 32.0 36.0 39 34.0535553329995 36.0 36.0 36.0 32.0 36.0 40 34.155082623935904 36.0 36.0 36.0 32.0 36.0 41 34.09768691498787 36.0 36.0 36.0 32.0 36.0 42 34.07250876314472 36.0 36.0 36.0 32.0 36.0 43 34.05531373984053 36.0 36.0 36.0 32.0 36.0 44 33.88531836215862 36.0 36.0 36.0 32.0 36.0 45 33.82283039944532 36.0 36.0 36.0 32.0 36.0 46 33.57328107545934 36.0 36.0 36.0 21.0 36.0 47 33.54678941489157 36.0 36.0 36.0 21.0 36.0 48 33.416977389160664 36.0 36.0 36.0 21.0 36.0 49 33.33340780401371 36.0 36.0 36.0 21.0 36.0 50 32.91151727591387 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 4.0 21 13.0 22 39.0 23 140.0 24 365.0 25 956.0 26 2075.0 27 3917.0 28 6892.0 29 10456.0 30 14995.0 31 20936.0 32 29507.0 33 46314.0 34 91061.0 35 291546.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.282193026216696 20.305562885589197 12.848125769252253 25.56411831894185 2 11.131376669099817 20.558071095514975 49.10759855705803 19.202953678327173 3 19.347134831352474 27.221461464237635 30.808194615374244 22.623209089035647 4 10.063364277185007 17.973113516428487 40.87824043757944 31.085281768807054 5 9.577635684295673 41.82947498170332 36.331612803821116 12.261276530179885 6 28.484897509528732 40.878319167827065 18.667267569176012 11.969515753468189 7 25.607449635992452 32.71233773737529 22.171719117137243 19.50849350949501 8 22.434613458649512 44.455722044605366 18.95901544624629 14.150649050498826 9 27.63036507034658 13.773484972506573 20.556802095471046 38.0393478616758 10 16.497789932879442 29.25801450266267 34.406170854077786 19.838024710380093 11 33.72289203035322 19.767150726089135 30.09475752089673 16.415199722660915 12 26.771413934031564 23.683886151866844 34.74629153842895 14.798408375672647 13 31.938091395312558 23.11538335609196 26.77146549515906 18.17505975343642 14 18.645083009129078 26.760140210315477 27.540926774777553 27.053850005777896 15 19.86236332153939 40.2852118576329 23.17750817133513 16.674916649492577 16 17.179236307187402 27.69301290026848 35.971680270562814 19.156070521981302 17 17.114517930742267 31.799429914101925 31.48010477254343 19.605947382612378 18 17.032762794746706 26.7997773570588 40.19745116203822 15.97000868615627 19 25.730711451793077 23.3355802935172 28.542621624744807 22.39108662994492 20 23.898347521281924 28.90720696429259 31.198143368899505 15.99630214552598 21 22.08986556758214 24.245213974808365 27.87681522283425 25.788105234775237 22 23.147606024421247 32.05847232387042 28.06767844073803 16.726243210970303 23 18.720748829953198 32.548872325263375 31.752662699100558 16.977716145682862 24 24.64090227996718 27.31338281800708 31.438625009148375 16.607089892877365 25 20.495560563163266 30.332235511642686 32.50881146356966 16.66339246162439 26 15.837777764937238 32.09235942980302 34.57353680451627 17.496326000743466 27 18.259229868408887 31.12807790686924 32.20245616197725 18.410236062744616 28 16.48060832986641 32.6310883064454 29.706351407571763 21.181951956116425 29 20.367791651499306 27.336688449886076 28.273886908304398 24.021632990310223 30 16.623876394214935 29.903370383995348 31.945169385919463 21.527583835870253 31 22.928713138278408 26.215305198682515 31.19286553537377 19.66311612766531 32 18.533163584675624 32.22309750211384 30.494280613021214 18.749458300189332 33 16.824444183354487 32.16793049186138 33.87077202802052 17.13685329676362 34 18.91296894802328 31.056021448629995 33.26771881030982 16.7632907930369 35 17.570992742792868 32.78262276390194 32.1429947150275 17.503389778277683 36 16.12053224029401 31.32632462959681 33.72537387029917 18.82776925981 37 17.599349770127564 30.852791115579514 28.263042636666725 23.2848164776262 38 19.34607161430745 34.84369281738159 28.329448928096767 17.480786640214188 39 22.931758080266256 28.273083242006408 29.090114157054064 19.70504452067327 40 23.944114990302555 29.26682703882252 30.835752076716698 15.953305894158229 41 22.951552201664878 26.770711751586102 33.06869440945458 17.20904163729444 42 19.99861325382655 34.21025768440353 30.24223759199231 15.548891469777601 43 16.191651964900657 34.311032872892 32.19898615594401 17.298329006263337 44 15.770679732821783 33.2326022141586 30.442562075792946 20.554155977226678 45 16.579899731706238 33.68926073801008 30.267696699004443 19.46314283127924 46 19.357292810230927 28.51986672059475 29.77138344793051 22.35145702124381 47 23.427445527086707 29.509652293996762 28.17568465513489 18.88721752378164 48 17.415187152591862 31.583468476623743 27.97215727212145 23.02918709866295 49 21.385360592432807 29.442716408424257 28.818119661411938 20.353803337730998 50 17.63989869321957 35.46045472492128 26.596689232784104 20.302957349075047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39.0 1 30.0 2 21.0 3 54.5 4 88.0 5 99.0 6 110.0 7 121.5 8 133.0 9 223.0 10 313.0 11 472.0 12 631.0 13 1215.5 14 1800.0 15 2520.5 16 3241.0 17 3870.5 18 4500.0 19 4697.5 20 4895.0 21 4957.0 22 5019.0 23 5335.0 24 5651.0 25 5775.0 26 5899.0 27 9331.0 28 12763.0 29 17229.0 30 21695.0 31 27100.0 32 32505.0 33 42042.5 34 51580.0 35 60877.0 36 70174.0 37 67403.5 38 64633.0 39 55375.5 40 46118.0 41 39127.0 42 32136.0 43 26931.0 44 21726.0 45 20062.0 46 18398.0 47 17432.0 48 16466.0 49 16369.0 50 16272.0 51 18011.5 52 19751.0 53 17106.0 54 14461.0 55 13201.5 56 11942.0 57 10880.5 58 9819.0 59 9190.5 60 8562.0 61 7407.5 62 6253.0 63 5026.0 64 3799.0 65 3390.5 66 2982.0 67 2192.5 68 1403.0 69 1255.5 70 1108.0 71 970.5 72 833.0 73 712.0 74 591.0 75 486.5 76 382.0 77 320.0 78 258.0 79 191.5 80 125.0 81 97.0 82 69.0 83 50.5 84 32.0 85 24.0 86 16.0 87 11.0 88 6.0 89 8.0 90 10.0 91 6.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 2.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009052039597858327 2 5.777897615654251E-4 3 1.9259658718847502E-4 4 0.0 5 0.0 6 1.9259658718847502E-4 7 0.0 8 0.0 9 9.629829359423751E-4 10 9.629829359423751E-4 11 0.0 12 3.8519317437695004E-4 13 5.777897615654251E-4 14 0.0 15 0.0052001078540888255 16 0.0011555795231308502 17 0.0 18 5.777897615654251E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0019259658718847501 24 3.8519317437695004E-4 25 0.0019259658718847501 26 0.005970494202842726 27 0.006933477138785101 28 0.005392704441277301 29 0.0025037556334501754 30 0.004044528330957975 31 0.00962982935942375 32 0.004044528330957975 33 0.005585301028465776 34 0.005007511266900351 35 0.0023111590462617003 36 0.010785408882554602 37 0.0036593351565810256 38 0.00962982935942375 39 0.004429721505334925 40 0.0021185624590732252 41 0.0042371249181464505 42 0.0036593351565810256 43 0.0015407726975078001 44 0.0030815453950156003 45 0.0025037556334501754 46 0.0019259658718847501 47 0.0032741419822040754 48 0.0034667385693925505 49 9.629829359423751E-4 50 9.629829359423751E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 519220.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.82634514927528 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41636492632891 31.86980929089385 2 13.208654435341959 11.313567876109209 3 4.649971636311963 5.974238706931093 4 2.253352561722906 3.860114182053951 5 1.255993941712164 2.6894815026581935 6 0.7938578043180397 2.039881699630212 7 0.5103537389762076 1.5299609761532744 8 0.408692794044648 1.4002254926222215 9 0.28451286013542765 1.0966181352810573 >10 1.8431671534645917 15.392545026719533 >50 0.21394349215870628 6.4109862869589485 >100 0.14894800086804272 11.625445856193203 >500 0.008575793989372157 2.430360326392823 >1k 0.003610860627104066 2.366764641402507 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2219 0.42737182697122605 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1966 0.3786448904125419 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1898 0.3655483224837256 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1583 0.304880397519356 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1346 0.2592350063556874 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1134 0.2184045298717307 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1092 0.21031547320981472 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 1006 0.1937521667116059 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 833 0.16043295712799968 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 830 0.15985516736643426 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 803 0.15465505951234546 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 779 0.15003274141982206 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 748 0.14406224721697933 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 745 0.14348445745541388 No Hit GTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGG 740 0.1425214745194715 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 736 0.1417510881707176 No Hit CCCTTATACCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAAC 681 0.13115827587535148 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 672 0.1294249065906552 No Hit CCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAACCTTTGGGC 667 0.12846192365471285 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 581 0.111898617156504 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 570 0.10978005469743075 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 552 0.1063133161280382 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 540 0.10400215708177651 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 535 0.10303917414583415 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 535 0.10303917414583415 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 522 0.10053541851238396 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.9259658718847502E-4 0.0 16 0.0 0.0 0.0 1.9259658718847502E-4 0.0 17 0.0 0.0 0.0 1.9259658718847502E-4 0.0 18 0.0 0.0 0.0 1.9259658718847502E-4 0.0 19 0.0 0.0 0.0 1.9259658718847502E-4 0.0 20 0.0 0.0 0.0 5.777897615654251E-4 0.0 21 0.0 0.0 0.0 0.001348176110319325 0.0 22 0.0 0.0 0.0 0.0017333692846962752 0.0 23 0.0 0.0 0.0 0.005970494202842726 0.0 24 0.0 0.0 0.0 0.009822425946612225 0.0 25 0.0 0.0 0.0 0.010978005469743077 0.0 26 0.0 0.0 0.0 0.013096567928816302 0.0 27 0.0 0.0 0.0 0.014637340626324102 0.0 28 0.0 0.0 0.0 0.018489272370093603 0.0 29 0.0 0.0 0.0 0.02407457339855938 0.0 30 0.0 0.0 0.0 0.044297215053349256 0.0 31 0.0 0.0 0.0 0.08243133931666731 0.0 32 0.0 0.0 0.0 0.12268402603905859 0.0 33 0.0 0.0 0.0 0.1565810253842302 0.0 34 0.0 0.0 0.0 0.19317437695004044 0.0 35 0.0 0.0 0.0 0.23535302954431647 0.0 36 0.0 0.0 0.0 0.2831169831670583 0.0 37 0.0 0.0 0.0 0.37363737914564155 0.0 38 0.0 0.0 0.0 0.47590616694272175 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCGAG 20 7.853927E-4 43.998363 1 ATAGGAC 155 0.0 31.221636 3 TATAGGA 145 0.0 30.340776 2 GACCTAG 30 0.0057430775 29.332243 7 CCGTAAG 70 3.583773E-8 28.28466 1 TAAGACC 55 4.9590453E-6 27.996262 4 GTACCTA 40 7.0282206E-4 27.498976 1 GCTCTAC 40 7.0282206E-4 27.498976 11 CAAGGAT 40 7.0282206E-4 27.498976 44 TAAGACT 100 6.002665E-11 26.396473 4 TAGGACC 1045 0.0 25.89128 4 ACTGTTC 760 0.0 25.472736 8 GTCCTAT 175 0.0 25.141922 1 ATACACT 795 0.0 24.625643 4 TAAGCTA 45 0.0013958756 24.448246 32 TATCGTT 45 0.0013974434 24.443537 13 GCGAAGA 45 0.0013982278 24.441181 20 AAGACCT 90 1.5104888E-8 24.441181 5 TCCTATA 180 0.0 24.441181 2 ATCGTTA 45 0.0013982278 24.441181 14 >>END_MODULE