##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063947_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 548941 Sequences flagged as poor quality 0 Sequence length 50 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.250006831335245 32.0 32.0 32.0 32.0 32.0 2 31.498115462317443 32.0 32.0 32.0 32.0 32.0 3 31.54976217844905 32.0 32.0 32.0 32.0 32.0 4 31.616379538056 32.0 32.0 32.0 32.0 32.0 5 31.577867202486242 32.0 32.0 32.0 32.0 32.0 6 35.15306927338275 36.0 36.0 36.0 36.0 36.0 7 35.20154624996129 36.0 36.0 36.0 36.0 36.0 8 35.13375025731363 36.0 36.0 36.0 36.0 36.0 9 35.24452354624632 36.0 36.0 36.0 36.0 36.0 10 35.137473790443785 36.0 36.0 36.0 36.0 36.0 11 35.239207856582034 36.0 36.0 36.0 36.0 36.0 12 35.1801359344629 36.0 36.0 36.0 36.0 36.0 13 35.220644841613215 36.0 36.0 36.0 36.0 36.0 14 35.16503412935088 36.0 36.0 36.0 36.0 36.0 15 35.1305404405938 36.0 36.0 36.0 36.0 36.0 16 35.152285946941475 36.0 36.0 36.0 36.0 36.0 17 35.161234085265995 36.0 36.0 36.0 36.0 36.0 18 35.16747701483402 36.0 36.0 36.0 36.0 36.0 19 35.10905543583008 36.0 36.0 36.0 36.0 36.0 20 35.08745566463427 36.0 36.0 36.0 36.0 36.0 21 35.04779202136477 36.0 36.0 36.0 36.0 36.0 22 35.0241993219672 36.0 36.0 36.0 36.0 36.0 23 35.053931114637095 36.0 36.0 36.0 36.0 36.0 24 35.021102449990074 36.0 36.0 36.0 36.0 36.0 25 34.9835792917636 36.0 36.0 36.0 36.0 36.0 26 34.95161957295957 36.0 36.0 36.0 36.0 36.0 27 34.87670623983269 36.0 36.0 36.0 36.0 36.0 28 34.81423504529631 36.0 36.0 36.0 32.0 36.0 29 34.76951257056769 36.0 36.0 36.0 32.0 36.0 30 34.69490163788094 36.0 36.0 36.0 32.0 36.0 31 34.68307705199648 36.0 36.0 36.0 32.0 36.0 32 34.612331744212945 36.0 36.0 36.0 32.0 36.0 33 34.663306256956574 36.0 36.0 36.0 32.0 36.0 34 34.6189809105168 36.0 36.0 36.0 32.0 36.0 35 34.58275843852071 36.0 36.0 36.0 32.0 36.0 36 34.48093146622315 36.0 36.0 36.0 32.0 36.0 37 34.357719682078766 36.0 36.0 36.0 32.0 36.0 38 34.275668969889296 36.0 36.0 36.0 32.0 36.0 39 34.05096904767543 36.0 36.0 36.0 32.0 36.0 40 34.17368533230347 36.0 36.0 36.0 32.0 36.0 41 34.139534121153275 36.0 36.0 36.0 32.0 36.0 42 34.117604624176366 36.0 36.0 36.0 32.0 36.0 43 34.11186448088228 36.0 36.0 36.0 32.0 36.0 44 33.925815342632454 36.0 36.0 36.0 32.0 36.0 45 33.86818073344858 36.0 36.0 36.0 32.0 36.0 46 33.59108538076041 36.0 36.0 36.0 21.0 36.0 47 33.623577032868745 36.0 36.0 36.0 21.0 36.0 48 33.503416578466535 36.0 36.0 36.0 21.0 36.0 49 33.42006518004667 36.0 36.0 36.0 21.0 36.0 50 32.97426863724881 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 0.0 20 3.0 21 8.0 22 41.0 23 125.0 24 345.0 25 920.0 26 2029.0 27 4011.0 28 6951.0 29 10718.0 30 15491.0 31 21929.0 32 31737.0 33 49971.0 34 98537.0 35 306123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.831403970952074 21.73128846427127 12.94622198416429 25.491085580612367 2 10.224852760881484 21.60029292978976 49.88404862488774 18.29080568444102 3 18.73836389537616 27.85123274395287 31.60192954395578 21.808473816715185 4 9.295534492777913 18.7457304154727 42.12893553223388 29.8297995595155 5 8.534432662162237 43.26694489936077 37.61187450017397 10.586747938303024 6 27.684861159436657 41.93179934382509 19.227090806082277 11.156248690655975 7 24.742549745783244 33.28135446250143 23.356244113666133 18.61985167804919 8 20.961451230642272 46.18037275408468 19.718148216292825 13.140027798980219 9 26.309442266493726 14.131337715143477 21.979247125347946 37.579972893014855 10 15.716614899760446 29.782943335731915 36.08860794083088 18.41183382367676 11 32.408400902829264 20.02018431853332 31.8207239029331 15.75069087570431 12 26.394822030054232 24.213166806633136 35.59216746426301 13.799843699049624 13 30.649671457120007 23.695529011420213 27.72184158895615 17.93295794250363 14 17.1264307093112 27.84853016990897 28.279906219429773 26.745132901350054 15 18.594614486343108 42.69552591739735 22.95756917712514 15.752290419134404 16 16.332200228078424 27.751970182207696 37.664455107535694 18.251374482178186 17 15.851976806250581 33.00391116713818 32.71043700506976 18.433675021541475 18 16.19508942722129 27.308184166517897 41.57354746802007 14.92317893824075 19 24.362909675174564 24.50390843460408 29.208421305750527 21.924760584470825 20 23.139869566801472 30.86038547017889 31.327831821328378 14.67191314169126 21 20.32768548896876 26.058173829245767 28.376455757540427 25.237684924245045 22 22.071486995822852 34.01744091784333 28.602995961299886 15.308076125033928 23 17.809511838334817 33.5818135778787 32.080730575639826 16.527944008146655 24 23.935446379288045 28.267621721174844 32.48430153441457 15.312630365122537 25 20.144972683269845 31.245639251563496 33.38853152764191 15.220856537524751 26 13.800698478977313 33.661075555604135 36.36426571349974 16.17396025191881 27 16.25612802028737 33.044216478749824 33.191416490409225 17.508239010553588 28 15.222282340381732 33.59639582524927 30.59868578059787 20.58263605377114 29 19.12361048869263 28.232902316125436 29.149223768249005 23.49426342693293 30 15.783902936675654 30.364716169933686 32.415470378197185 21.43591051519347 31 21.922060886516423 27.008690265809175 31.662081655705148 19.407167191969247 32 17.11484405030177 33.44907428492313 31.61276453881846 17.82331712595664 33 15.834096949845424 33.54168070931624 35.13261422822509 15.491608112613244 34 18.23678472079267 32.180664530385535 34.7101355548714 14.872415193950403 35 16.552048283639053 34.4073758978946 32.747944611539324 16.29263120692702 36 14.753190442790649 32.11812608739217 34.843552162942586 18.285131306874597 37 16.548008992235637 32.149610688663884 28.821791232934608 22.480589086165875 38 18.435258515931448 36.09421315653791 28.90798221114518 16.56254611638546 39 21.426086006030076 29.465399925307196 29.730650465008246 19.377863603654482 40 23.53663446421447 29.91366730852961 31.89882734008231 14.650870887173612 41 21.978834764327708 26.910163430305744 34.92136362559868 16.189638179767872 42 18.91557090652064 35.12061559313142 31.599427253549607 14.364386246798341 43 14.674570441727269 35.887243685967036 33.40717314951105 16.031012722794642 44 14.664759944255696 34.684980917594984 31.2916829861459 19.358576152003426 45 15.29889695501289 34.893020120779326 31.284760490768488 18.523322433439297 46 18.51279024436453 28.94938189290516 30.48107787092802 22.056749991802292 47 22.79046211973541 30.276885633244493 29.34579643559162 17.586855811428478 48 16.471925586682552 32.07489424958192 28.82987754447711 22.623302619258418 49 20.598136765900705 30.03854715833118 29.835427680357345 19.527888395410777 50 16.55769808811608 36.280069589295636 27.604179001156787 19.558053321431498 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 57.0 1 46.5 2 36.0 3 75.0 4 114.0 5 145.0 6 176.0 7 182.0 8 188.0 9 245.0 10 302.0 11 481.5 12 661.0 13 1234.5 14 1808.0 15 2489.0 16 3170.0 17 3815.0 18 4460.0 19 4662.0 20 4864.0 21 5222.5 22 5581.0 23 5822.5 24 6064.0 25 7493.0 26 8922.0 27 13316.0 28 17710.0 29 23201.0 30 28692.0 31 33851.0 32 39010.0 33 50584.5 34 62159.0 35 73454.0 36 84749.0 37 82213.0 38 79677.0 39 67783.5 40 55890.0 41 47139.5 42 38389.0 43 29911.5 44 21434.0 45 18785.0 46 16136.0 47 14790.0 48 13444.0 49 11521.5 50 9599.0 51 9244.5 52 8890.0 53 7978.5 54 7067.0 55 6641.5 56 6216.0 57 6086.0 58 5956.0 59 5218.0 60 4480.0 61 4005.5 62 3531.0 63 3069.0 64 2607.0 65 2372.5 66 2138.0 67 1899.0 68 1660.0 69 1439.0 70 1218.0 71 944.0 72 670.0 73 613.0 74 556.0 75 418.5 76 281.0 77 216.0 78 151.0 79 124.5 80 98.0 81 74.0 82 50.0 83 43.5 84 37.0 85 29.5 86 22.0 87 14.0 88 6.0 89 5.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 2.0 96 3.0 97 2.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010019291690728148 2 7.286757593256835E-4 3 5.465068194942626E-4 4 0.0 5 0.0 6 3.6433787966284176E-4 7 0.0 8 0.0 9 9.108446991571045E-4 10 0.0010930136389885252 11 0.0 12 0.0 13 3.6433787966284176E-4 14 0.0 15 0.004372054555954101 16 0.001275182578819946 17 0.0 18 5.465068194942626E-4 19 0.0 20 1.8216893983142088E-4 21 0.0 22 3.6433787966284176E-4 23 7.286757593256835E-4 24 3.6433787966284176E-4 25 0.001821689398314209 26 0.006193743954268309 27 0.005100730315279784 28 0.004007716676291259 29 0.001275182578819946 30 0.0038255477364598383 31 0.009290615931402464 32 0.002550365157639892 33 0.0032790409169655755 34 0.0021860272779770503 35 0.0032790409169655755 36 0.006558081833931151 37 0.00418988561612268 38 0.01056579851022241 39 0.0047363924356169426 40 0.0032790409169655755 41 0.004007716676291259 42 0.001275182578819946 43 9.108446991571045E-4 44 0.0010930136389885252 45 0.0010930136389885252 46 0.001275182578819946 47 0.002550365157639892 48 0.001275182578819946 49 5.465068194942626E-4 50 0.0010930136389885252 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 548941.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.61586250002649 #Duplication Level Percentage of deduplicated Percentage of total 1 73.63412684354803 29.17079444343508 2 13.070557872264468 10.356028469325357 3 4.748218206850339 5.64314278808116 4 2.3432525239491837 3.7131987916644347 5 1.350851174903588 2.6757567201489887 6 0.9133741372880047 2.1710462540329147 7 0.5744391370375809 1.5929831307260274 8 0.4465847969173412 1.4153473527423712 9 0.33996620967110475 1.2121249155287095 >10 2.175238146745555 16.50313533494074 >50 0.22589893246290751 6.202513011192407 >100 0.15997332564049335 12.645375456131152 >500 0.013369528655833738 3.6594845029391365 >1k 0.004149164065603574 3.039068829111505 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2982 0.543227778577297 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2467 0.44941077456411527 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2301 0.4191707305520994 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2053 0.37399283347390705 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1654 0.3013074264811701 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1470 0.26778834155218867 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1441 0.26250544229707745 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1173 0.21368416642225668 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1099 0.20020366487473154 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 982 0.17888989891445528 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 974 0.1774325473958039 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 899 0.16376987690844735 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 875 0.15939782235249325 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 869 0.15830480871350472 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 854 0.1555722746160334 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 804 0.1464638276244624 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 737 0.13425850865575717 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 730 0.13298332607693725 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 726 0.13225465031761155 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 723 0.1317081434981173 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 719 0.1309794677387916 No Hit GTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTGTAACTCACTC 713 0.12988645409980307 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 680 0.1238748790853662 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 677 0.12332837226587193 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 673 0.12259969650654624 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 668 0.12168885180738914 No Hit GTTCTACAGTGTGGTTTTTATCATTTTCCATGTTTCTCATTGTAACTCAT 608 0.11075871541750387 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 605 0.11021220859800962 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 601 0.10948353283868394 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 592 0.10784401238020115 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 585 0.10656882980138119 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 572 0.10420063358357273 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATG 561 0.10219677524542711 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 1.8216893983142085E-4 0.0 18 0.0 0.0 0.0 1.8216893983142085E-4 0.0 19 0.0 0.0 0.0 1.8216893983142085E-4 0.0 20 0.0 0.0 0.0 1.8216893983142085E-4 0.0 21 0.0 0.0 0.0 5.465068194942626E-4 0.0 22 0.0 0.0 0.0 9.108446991571043E-4 0.0 23 0.0 0.0 0.0 0.0020038583381456294 0.0 24 0.0 0.0 0.0 0.0032790409169655755 0.0 25 0.0 0.0 0.0 0.0036433787966284174 0.0 26 0.0 0.0 0.0 0.004372054555954101 0.0 27 0.0 0.0 0.0 0.005829406074605467 0.0 28 0.0 0.0 0.0 0.007651095472919677 0.0 29 0.0 0.0 0.0 0.011112305329716674 0.0 30 0.0 0.0 0.0 0.017488218223816403 0.0 31 0.0 0.0 0.0 0.034612098567969964 0.0 32 0.0 0.0 0.0 0.05483285088925768 0.0 33 0.0 0.0 0.0 0.06904202819610851 0.0 34 0.0 0.0 0.0 0.09217748355469896 0.0 35 0.0 0.0 0.0 0.1134912495149752 0.0 36 0.0 0.0 0.0 0.14682816550412522 0.0 37 0.0 0.0 0.0 0.20238969215270858 0.0 38 0.0 0.0 0.0 0.27015653776999715 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGGA 20 7.846637E-4 44.007107 9 TCTAGCG 20 7.8501593E-4 44.003098 28 CTGTATG 25 4.4427215E-5 43.995083 1 GTGCACT 30 1.299671E-4 36.669247 11 TATACTC 30 1.3003679E-4 36.66591 5 TAGCGGC 25 0.0023498142 35.205685 30 CTGTTCA 25 0.0023498142 35.205685 9 CGAGTAA 25 0.002350865 35.20248 21 TGTGCAC 35 3.2125463E-4 31.433647 10 TAGGAAC 70 1.033186E-9 31.427921 4 CTAGGTA 35 3.2159817E-4 31.427921 4 GTATAGT 35 3.2177003E-4 31.425058 1 TAGGACC 950 0.0 30.104641 4 CCGGTCC 30 0.0057377852 29.33807 9 TGGCTAA 30 0.0057403413 29.335398 26 CTAGCGG 30 0.0057403413 29.335398 29 AGAACGT 60 2.9409603E-7 29.332727 5 GTGGTAC 30 0.005745455 29.330053 1 ACTAGAG 55 4.9588853E-6 27.99687 2 GGCGGGT 40 7.0205756E-4 27.504442 32 >>END_MODULE