##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063945_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1299551 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2006100568581 32.0 32.0 32.0 32.0 32.0 2 30.83243443312344 32.0 32.0 32.0 32.0 32.0 3 30.84410615666488 32.0 32.0 32.0 32.0 32.0 4 30.82698870609926 32.0 32.0 32.0 32.0 32.0 5 30.801406793577165 32.0 32.0 32.0 32.0 32.0 6 34.238298458467575 36.0 36.0 36.0 32.0 36.0 7 34.21814380505267 36.0 36.0 36.0 32.0 36.0 8 34.18373422820651 36.0 36.0 36.0 32.0 36.0 9 34.355999110462 36.0 36.0 36.0 32.0 36.0 10 34.0226078083892 36.0 36.0 36.0 32.0 36.0 11 34.32843728333863 36.0 36.0 36.0 32.0 36.0 12 34.13141384986045 36.0 36.0 36.0 32.0 36.0 13 34.25201627331286 36.0 36.0 36.0 32.0 36.0 14 34.120601653955866 36.0 36.0 36.0 32.0 36.0 15 34.0443068413629 36.0 36.0 36.0 32.0 36.0 16 34.0468323290121 36.0 36.0 36.0 32.0 36.0 17 33.9743734566785 36.0 36.0 36.0 32.0 36.0 18 33.97076297890579 36.0 36.0 36.0 32.0 36.0 19 33.971971857972484 36.0 36.0 36.0 32.0 36.0 20 33.94808822431747 36.0 36.0 36.0 32.0 36.0 21 33.906551570503964 36.0 36.0 36.0 32.0 36.0 22 33.89462899109 36.0 36.0 36.0 32.0 36.0 23 33.85685209737825 36.0 36.0 36.0 32.0 36.0 24 33.82177921451332 36.0 36.0 36.0 32.0 36.0 25 33.17666563297631 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 10.0 5 19.0 6 57.0 7 15.0 8 78.0 9 74.0 10 112.0 11 41.0 12 74.0 13 64.0 14 176.0 15 407.0 16 713.0 17 964.0 18 1189.0 19 1425.0 20 1866.0 21 2339.0 22 3221.0 23 4490.0 24 6128.0 25 8657.0 26 12267.0 27 17051.0 28 24123.0 29 34298.0 30 48561.0 31 72027.0 32 111621.0 33 168526.0 34 342224.0 35 436731.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.44181617620456 17.120872370545023 11.269351179795564 26.16796027345485 2 16.743478792850432 19.59513378699814 37.402336761085685 26.259050659065743 3 18.834900952575893 23.664343004273086 28.662615455291878 28.83814058785914 4 12.494199687725809 15.22517524061196 36.14362150336399 36.13700356829824 5 14.504744387923935 36.44790408102014 33.91471645259845 15.132635078457476 6 34.26970875161231 35.56772040647328 16.779644320487126 13.382926521427274 7 30.238287653836387 30.489274746588467 20.8129949894941 18.459442610081044 8 28.166963922140365 32.90267853225331 19.3666110643696 19.563746481236727 9 27.19342613057667 14.105812260722223 18.483079938504698 40.217681670196406 10 15.35417975534942 26.74248863594368 32.10422903039038 25.799102578316518 11 37.17965793738476 21.08847203563056 22.505533592273373 19.22633643471131 12 24.491263569705495 23.548362010753358 29.010353745927837 22.95002067361331 13 29.2927737448836 19.46820207520381 25.342710453939283 25.896313725973307 14 23.261923791835873 19.51034337255699 25.45934183718255 31.768390998424582 15 24.922447464846314 27.183231867643677 22.38740927181076 25.506911395699248 16 25.5704383794114 25.753616202806107 23.82797762135242 24.847967796430073 17 23.87106460628739 25.96986425827116 25.274447755218322 24.884623380223132 18 24.6638698171267 25.117741821217244 26.159783891009113 24.05860447064694 19 25.304495608040206 24.98608141084826 25.593956059610832 24.115466921500698 20 25.562528252514138 24.38029289434349 25.09878272574866 24.958396127393716 21 26.42355619144719 24.352732990711637 24.678772907114816 24.544937910726357 22 25.541704592533726 24.36496312142592 25.093139768948685 25.00019251709167 23 24.167303929156432 24.331644491472236 25.63204502346127 25.86900655591006 24 24.504845277625474 24.95433487552596 25.47682706702069 25.063992779827878 25 24.483860087387626 24.677994920613408 25.47047471780758 25.36767027419139 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 88.0 1 88.0 2 256.5 3 425.0 4 425.0 5 425.0 6 1248.0 7 2071.0 8 2071.0 9 2071.0 10 2314.0 11 2557.0 12 2557.0 13 2557.0 14 3103.5 15 3650.0 16 3650.0 17 3650.0 18 6253.0 19 8856.0 20 8856.0 21 8856.0 22 14027.5 23 19199.0 24 19199.0 25 19199.0 26 28010.0 27 36821.0 28 36821.0 29 36821.0 30 45696.5 31 54572.0 32 54572.0 33 54572.0 34 68222.0 35 81872.0 36 81872.0 37 81872.0 38 94905.0 39 107938.0 40 107938.0 41 107938.0 42 123354.5 43 138771.0 44 138771.0 45 138771.0 46 154285.0 47 169799.0 48 169799.0 49 169799.0 50 173089.0 51 176379.0 52 176379.0 53 176379.0 54 164208.0 55 152037.0 56 152037.0 57 152037.0 58 139010.5 59 125984.0 60 125984.0 61 125984.0 62 110196.5 63 94409.0 64 94409.0 65 94409.0 66 77235.0 67 60061.0 68 60061.0 69 60061.0 70 45367.5 71 30674.0 72 30674.0 73 30674.0 74 23576.5 75 16479.0 76 16479.0 77 16479.0 78 13154.0 79 9829.0 80 9829.0 81 9829.0 82 6753.0 83 3677.0 84 3677.0 85 3677.0 86 2791.0 87 1905.0 88 1905.0 89 1905.0 90 1275.0 91 645.0 92 645.0 93 645.0 94 422.0 95 199.0 96 199.0 97 199.0 98 426.5 99 654.0 100 654.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03616633745039633 2 0.0046169792489867655 3 0.0016928923912951474 4 0.004001382015788531 5 0.00931090815212331 6 0.013773988092810517 7 0.021622852816088018 8 0.034165646442502064 9 0.04540029594836986 10 0.0553268013336914 11 0.0512484696637531 12 0.06109802539492486 13 0.060559377815876406 14 0.06502245775656361 15 0.05802003922893369 16 0.06256006882377067 17 0.05855868680798214 18 0.07287132247984111 19 0.0714092790509953 20 0.07648795622488075 21 0.07210182593834331 22 0.07425641625453713 23 0.07910424446597325 24 0.0744103155628367 25 0.07456421487113626 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1299551.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.74549674278528 #Duplication Level Percentage of deduplicated Percentage of total 1 80.47882719882426 48.08247508270535 2 12.41549172778105 14.835394411644407 3 3.335729739058846 5.978844907792568 4 1.3085816437824755 3.1272744134509796 5 0.6790578413515738 2.0285324024316624 6 0.41390139731218867 1.4837246750969786 7 0.25442724742050427 1.0640617597426294 8 0.17471859699876588 0.8350919494315024 9 0.13379808674568533 0.7194449840269721 >10 0.6727196673784148 7.28614871028665 >50 0.05913859332688339 2.472270488544 >100 0.06548688455062388 8.012696499404495 >500 0.005929893199330291 2.3818695245430717 >1k 0.0021914822693177164 1.6921701908987852 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3022 0.23254185484063344 No Hit TATCAACGCAGAGTACTTTTTTTTT 1988 0.1529759124497615 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1356 0.10434373102710089 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1335 0.10272778828995553 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.694965414977943E-5 0.0 8 0.0 0.0 0.0 7.694965414977943E-5 0.0 9 0.0 0.0 0.0 7.694965414977943E-5 0.0 10 0.0 0.0 0.0 7.694965414977943E-5 0.0 11 0.0 0.0 0.0 7.694965414977943E-5 0.0 12 0.0 0.0 0.0 7.694965414977943E-5 7.694965414977943E-5 13 0.0 0.0 0.0 7.694965414977943E-5 2.3084896244933827E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 95 4.8985385E-9 13.999971 7 CGAACGA 130 1.8189894E-12 13.888331 16 ACGAACG 135 1.8189894E-12 13.373949 15 CGCGGTC 105 1.9934305E-8 12.666154 10 ACTAGAC 60 4.1046028E-4 12.661764 3 CGTTATT 75 1.4863857E-5 12.659815 2 AACGAGA 145 7.2759576E-12 12.452087 18 CCGACCA 215 0.0 12.372544 9 GCGTAAC 70 1.09104636E-4 12.213791 11 GCGTTAT 70 1.0945819E-4 12.2095585 1 ACCGTCT 55 0.003068024 12.090884 8 CGACCAT 220 0.0 12.090419 10 GCTCGAC 55 0.0030689093 12.090419 11 GATATAC 55 0.0030768851 12.08623 1 GATAACG 150 1.4551915E-11 12.0328455 11 GAACCGC 120 1.0017175E-8 11.874062 6 TAAGACT 105 2.7265742E-7 11.759163 4 TACACCG 65 8.0297765E-4 11.690933 5 TCGAACG 65 8.0479536E-4 11.687782 3 ACGAGAC 155 2.5465852E-11 11.648278 19 >>END_MODULE