##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063944_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1486856 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.323344022554974 32.0 32.0 32.0 32.0 32.0 2 31.360909193627357 32.0 32.0 32.0 32.0 32.0 3 31.4451950962299 32.0 32.0 32.0 32.0 32.0 4 31.53865539097263 32.0 32.0 32.0 32.0 32.0 5 31.468858450313952 32.0 32.0 32.0 32.0 32.0 6 35.06238936386577 36.0 36.0 36.0 36.0 36.0 7 35.081931942299725 36.0 36.0 36.0 36.0 36.0 8 35.03160225334531 36.0 36.0 36.0 36.0 36.0 9 35.15257160074681 36.0 36.0 36.0 36.0 36.0 10 34.9889155372141 36.0 36.0 36.0 36.0 36.0 11 35.1474487105678 36.0 36.0 36.0 36.0 36.0 12 35.05059602274867 36.0 36.0 36.0 36.0 36.0 13 35.0945296652803 36.0 36.0 36.0 36.0 36.0 14 35.035237440612946 36.0 36.0 36.0 36.0 36.0 15 35.00523857051389 36.0 36.0 36.0 36.0 36.0 16 35.02026759820723 36.0 36.0 36.0 36.0 36.0 17 34.980113743361834 36.0 36.0 36.0 36.0 36.0 18 34.97473393522977 36.0 36.0 36.0 36.0 36.0 19 34.975001614144205 36.0 36.0 36.0 36.0 36.0 20 34.97036363978758 36.0 36.0 36.0 36.0 36.0 21 34.97240149684973 36.0 36.0 36.0 36.0 36.0 22 34.94833931463437 36.0 36.0 36.0 36.0 36.0 23 34.902839279661244 36.0 36.0 36.0 32.0 36.0 24 34.87514930833921 36.0 36.0 36.0 32.0 36.0 25 34.84577390144035 36.0 36.0 36.0 32.0 36.0 26 34.77650559300968 36.0 36.0 36.0 32.0 36.0 27 34.7795025207552 36.0 36.0 36.0 32.0 36.0 28 34.754550541545385 36.0 36.0 36.0 32.0 36.0 29 34.72217618922075 36.0 36.0 36.0 32.0 36.0 30 34.70379781229655 36.0 36.0 36.0 32.0 36.0 31 34.70168799130514 36.0 36.0 36.0 32.0 36.0 32 34.65587857869222 36.0 36.0 36.0 32.0 36.0 33 34.63655929020699 36.0 36.0 36.0 32.0 36.0 34 34.62434963439634 36.0 36.0 36.0 32.0 36.0 35 34.582211727295714 36.0 36.0 36.0 32.0 36.0 36 34.5738766901435 36.0 36.0 36.0 32.0 36.0 37 34.55323514852817 36.0 36.0 36.0 32.0 36.0 38 34.51658129637302 36.0 36.0 36.0 32.0 36.0 39 34.51602710686173 36.0 36.0 36.0 32.0 36.0 40 34.49612739902183 36.0 36.0 36.0 32.0 36.0 41 34.48120261814191 36.0 36.0 36.0 32.0 36.0 42 34.41393584852871 36.0 36.0 36.0 32.0 36.0 43 34.40423954976138 36.0 36.0 36.0 32.0 36.0 44 34.34589428969584 36.0 36.0 36.0 32.0 36.0 45 34.31892732046681 36.0 36.0 36.0 32.0 36.0 46 34.29092595382471 36.0 36.0 36.0 32.0 36.0 47 34.259366744324936 36.0 36.0 36.0 32.0 36.0 48 34.223902650962835 36.0 36.0 36.0 32.0 36.0 49 34.20403388088692 36.0 36.0 36.0 32.0 36.0 50 33.57667723034376 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 8.0 20 15.0 21 30.0 22 164.0 23 441.0 24 1090.0 25 2533.0 26 5314.0 27 9852.0 28 16687.0 29 26085.0 30 37895.0 31 54584.0 32 79935.0 33 130446.0 34 270889.0 35 850886.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.28609584844186 18.162789399378372 11.908715897771168 26.642398854408594 2 15.920963163087626 20.436412256507207 37.19572438663995 26.44690019376521 3 17.993629502291416 24.547063800480746 28.79395017937202 28.665356517855823 4 12.28666394055645 16.3061520416234 36.07585401679786 35.331330001022295 5 14.327883803138972 37.03183092377473 33.383865014500394 15.256420258585901 6 34.10234112227789 35.79329737815019 16.923820880505176 13.180540619066738 7 30.29833460447361 30.552293634748267 20.83345103150679 18.315920729271333 8 28.181814513308616 32.97669713812232 19.294134737997492 19.54735361057157 9 27.807056835897832 14.072847014006868 18.311427845056837 39.808668305038466 10 15.853848823413887 26.874238319554706 31.588115498330694 25.683797358700712 11 37.12289555948928 21.04084053869373 22.67697746116638 19.159286440650607 12 25.09166993979242 23.617149206110074 28.713675029727153 22.577505824370352 13 29.674028768220577 19.538500547130205 25.15453822143338 25.632932463215834 14 23.7505498186103 19.773293141088498 25.18081802248237 31.29533901781883 15 25.180422251965645 27.29329629604719 22.15908097310313 25.36720047888404 16 25.7249564178719 25.730605952995866 23.72656788050964 24.81786974862259 17 24.266102433591417 25.784137804871488 25.14877029113781 24.800989470399283 18 24.878148516562856 25.045213003858493 26.0059010620432 24.070737417535447 19 25.817429529154133 24.800249654304114 25.406159036248297 23.976161780293452 20 26.001599357566718 24.405066560311855 24.749688434654 24.843645647467426 21 27.0645576975847 24.114641902107532 24.313921455742857 24.506878944564907 22 26.13555045007721 24.40243036312864 24.736020166041634 24.725999020752514 23 24.710663872396175 24.221980398856108 25.339845525983755 25.72751020276396 24 25.11124203684573 24.80347688533058 25.10317127238292 24.98210980544077 25 25.05757238247432 24.425352294555374 25.281808741317064 25.235266581653242 26 24.729144751179064 25.244287624464274 25.476401223590432 24.550166400766223 27 25.46612634729532 24.82837012997932 24.69721376805502 25.008289754670344 28 24.777996218722233 24.71154473469514 25.447555453023575 25.06290359355905 29 24.835503638323903 24.90013861882916 25.157400638009808 25.10695710483713 30 24.672046467706394 24.939467149494618 25.50417138598705 24.884314996811938 31 25.31843010276799 24.7116691676526 24.691894451443318 25.27800627813609 32 25.03309093550496 24.865954808005316 24.601967161954573 25.498987094535153 33 24.709037982448116 24.534164832740558 25.153753853935186 25.60304333087614 34 25.335933953222472 24.572831368856455 25.40420022531233 24.687034452608746 35 25.75349338986608 24.59026316780647 25.155904461100558 24.500338981226896 36 24.760432704240074 24.98938955824914 25.051942400266892 25.198235337243897 37 25.62230882121493 24.899414985990063 24.6473975687415 24.830878624053508 38 24.95900431951206 24.792801979092538 25.176526929352903 25.071666772042494 39 25.41666778764538 24.662899281407803 24.614069448666797 25.306363482280013 40 25.74658837930362 24.728180087837885 25.10596369457167 24.419267838286824 41 24.787228461547777 25.03783277710744 25.402574377558334 24.772364383786453 42 25.75891172714084 25.24378998851922 24.805408542855854 24.19188974148408 43 25.145510527738807 24.554119693254258 25.065138408188137 25.235231370818802 44 24.80741008771635 24.95490430026674 24.82065968182142 25.417025930195486 45 24.983673373306388 25.13439621746865 24.906865926615932 24.97506448260903 46 24.874011071825628 24.807897570480154 24.986733582766636 25.331357774927582 47 25.106603354810943 24.67844123700246 25.256184339731774 24.958771068454823 48 25.56287462201513 25.249254791395398 24.48138054601999 24.706490040569477 49 24.944412684534417 25.25863402495208 24.64142314288597 25.155530147627537 50 24.910497561592408 25.467924733880317 24.58430043495192 25.03727726957536 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 20.0 1 21.0 2 22.0 3 72.0 4 122.0 5 145.5 6 169.0 7 164.5 8 160.0 9 238.0 10 316.0 11 461.5 12 607.0 13 1155.0 14 1703.0 15 2317.0 16 2931.0 17 3238.0 18 3545.0 19 3651.5 20 3758.0 21 4198.0 22 4638.0 23 5325.5 24 6013.0 25 7254.0 26 8495.0 27 10780.0 28 13065.0 29 15563.0 30 18061.0 31 20668.0 32 23275.0 33 27492.0 34 31709.0 35 37189.5 36 42670.0 37 49542.0 38 56414.0 39 60955.0 40 65496.0 41 71475.0 42 77454.0 43 79256.0 44 81058.0 45 88450.5 46 95843.0 47 102276.5 48 108710.0 49 112473.5 50 116237.0 51 113148.5 52 110060.0 53 108921.5 54 107783.0 55 107798.5 56 107814.0 57 105302.0 58 102790.0 59 92729.0 60 82668.0 61 72682.5 62 62697.0 63 54539.5 64 46382.0 65 39399.0 66 32416.0 67 27897.5 68 23379.0 69 21126.0 70 18873.0 71 14687.0 72 10501.0 73 8838.5 74 7176.0 75 5688.0 76 4200.0 77 3588.0 78 2976.0 79 2460.0 80 1944.0 81 1534.0 82 1124.0 83 967.0 84 810.0 85 586.0 86 362.0 87 260.5 88 159.0 89 118.0 90 77.0 91 71.5 92 66.0 93 53.0 94 40.0 95 41.0 96 42.0 97 28.5 98 15.0 99 13.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007599928977654864 2 3.362800432590648E-4 3 1.345120173036259E-4 4 0.0 5 0.0 6 3.362800432590648E-4 7 1.345120173036259E-4 8 0.0 9 9.415841211253813E-4 10 8.070721038217554E-4 11 0.0 12 0.0 13 4.7079206056269065E-4 14 1.345120173036259E-4 15 0.0044388965710196555 16 5.380480692145035E-4 17 0.0 18 3.362800432590648E-4 19 0.0 20 6.053040778663166E-4 21 0.0 22 0.0 23 2.690240346072518E-4 24 5.380480692145035E-4 25 0.002152192276858014 26 0.005649504726752288 27 0.005447736700796849 28 0.003833592493153338 29 0.003026520389331583 30 0.004035360519108778 31 0.007330904943047612 32 0.00295926438067977 33 0.004304384553716028 34 0.0020849362682062015 35 0.0032282884152870215 36 0.007599928977654864 37 0.0036318244671978994 38 0.007667184986306676 39 0.004035360519108778 40 0.0017486562249471368 41 0.0033628004325906478 42 0.0015468881989916979 43 0.001479632190339885 44 0.0012106081557326331 45 0.001412376181688072 46 0.0012778641643844462 47 0.0024212163114652662 48 0.0016141442076435108 49 4.035360519108777E-4 50 0.0016814002162953239 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1486856.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.53548000974355 #Duplication Level Percentage of deduplicated Percentage of total 1 81.25953853272514 50.003447089814934 2 11.863295846778852 14.600272088582678 3 3.2568637695748803 6.012380261613991 4 1.2809187605090133 3.1528780312563147 5 0.6485436220081292 1.995422154376396 6 0.36765319714857353 1.3574229578192611 7 0.2503597416066494 1.0784204812416376 8 0.17886583661971162 0.8805276090990655 9 0.1352998982389967 0.7493169765065507 >10 0.6358138267245744 7.078114029249669 >50 0.059553171696803076 2.606091048628501 >100 0.05613893877846167 7.176309918591568 >500 0.005833960804340534 2.355349669726508 >1k 0.001320896785888423 0.9540476834928785 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.0176802595543887E-4 13 0.0 0.0 0.0 0.0 2.0176802595543887E-4 14 0.0 0.0 0.0 0.0 2.6902403460725183E-4 15 0.0 0.0 0.0 0.0 2.6902403460725183E-4 16 0.0 0.0 0.0 0.0 2.6902403460725183E-4 17 0.0 0.0 0.0 0.0 2.6902403460725183E-4 18 0.0 0.0 0.0 1.3451201730362591E-4 2.6902403460725183E-4 19 0.0 0.0 0.0 2.0176802595543887E-4 2.6902403460725183E-4 20 0.0 0.0 0.0 2.0176802595543887E-4 4.0353605191087774E-4 21 0.0 0.0 0.0 2.6902403460725183E-4 4.7079206056269065E-4 22 0.0 0.0 0.0 2.6902403460725183E-4 5.380480692145037E-4 23 0.0 0.0 0.0 6.725600865181296E-4 5.380480692145037E-4 24 0.0 0.0 0.0 8.743281124735684E-4 5.380480692145037E-4 25 0.0 0.0 0.0 0.0011433521470808202 5.380480692145037E-4 26 0.0 0.0 0.0 0.001412376181688072 5.380480692145037E-4 27 0.0 0.0 0.0 0.0018159122335989497 5.380480692145037E-4 28 0.0 0.0 0.0 0.0032955444239388346 5.380480692145037E-4 29 0.0 0.0 0.0 0.005447736700796849 5.380480692145037E-4 30 0.0 0.0 0.0 0.01163528949676364 5.380480692145037E-4 31 0.0 0.0 0.0 0.026969659469376996 5.380480692145037E-4 32 0.0 0.0 0.0 0.043649149615026604 5.380480692145037E-4 33 0.0 0.0 0.0 0.0612702238818016 5.380480692145037E-4 34 0.0 0.0 0.0 0.08319568270229262 5.380480692145037E-4 35 0.0 0.0 0.0 0.10787863787750798 5.380480692145037E-4 36 0.0 0.0 0.0 0.14083408211689633 5.380480692145037E-4 37 0.0 0.0 0.0 0.18972920040676433 5.380480692145037E-4 38 0.0 0.0 0.0 0.25974270541330163 5.380480692145037E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2625 0.0 20.450445 1 CCGTTAT 60 0.0074080806 18.335392 31 CGAATTT 60 0.007409518 18.334778 28 GTATTAA 230 0.0 18.174732 1 CGTCGTA 415 0.0 18.022486 10 ATACCGT 455 0.0 17.404451 6 CGAGCCG 510 0.0 17.253939 15 TCTATAC 90 2.2178865E-4 17.109007 3 TAGGACG 340 0.0 16.821459 4 TACCGTC 445 0.0 16.80692 7 ATCCCGA 105 3.7781785E-5 16.760406 16 CGCAATA 390 0.0 16.360813 36 ACCGTCG 460 0.0 16.258867 8 TAGGACA 385 0.0 15.998031 4 AACGCAG 3345 0.0 15.980097 6 CCGTCGT 485 0.0 15.874868 9 GGTATCA 1485 0.0 15.852567 1 GGTATAT 125 9.439069E-6 15.840714 1 GTCGTAG 460 0.0 15.781197 11 TAGCGGC 405 0.0 15.754327 30 >>END_MODULE