##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063943_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1311055 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.234071034395964 32.0 32.0 32.0 32.0 32.0 2 30.833452448600553 32.0 32.0 32.0 32.0 32.0 3 30.836671993165808 32.0 32.0 32.0 32.0 32.0 4 30.874964055665092 32.0 32.0 32.0 32.0 32.0 5 30.732807548119645 32.0 32.0 32.0 32.0 32.0 6 34.396761386822064 36.0 36.0 36.0 32.0 36.0 7 34.356213888814736 36.0 36.0 36.0 32.0 36.0 8 34.30676439966287 36.0 36.0 36.0 32.0 36.0 9 34.47007028690635 36.0 36.0 36.0 32.0 36.0 10 34.11747028156714 36.0 36.0 36.0 32.0 36.0 11 34.43298717445111 36.0 36.0 36.0 32.0 36.0 12 34.23355847008707 36.0 36.0 36.0 32.0 36.0 13 34.33276559717174 36.0 36.0 36.0 32.0 36.0 14 34.231878143937514 36.0 36.0 36.0 32.0 36.0 15 34.1439939590635 36.0 36.0 36.0 32.0 36.0 16 34.14396039830518 36.0 36.0 36.0 32.0 36.0 17 34.06835792548749 36.0 36.0 36.0 32.0 36.0 18 34.06899024068403 36.0 36.0 36.0 32.0 36.0 19 34.08497050085618 36.0 36.0 36.0 32.0 36.0 20 34.06114465068208 36.0 36.0 36.0 32.0 36.0 21 34.05394052881077 36.0 36.0 36.0 32.0 36.0 22 34.02713921231375 36.0 36.0 36.0 32.0 36.0 23 33.97061374236779 36.0 36.0 36.0 32.0 36.0 24 33.95630541815561 36.0 36.0 36.0 32.0 36.0 25 33.541499784524675 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 20.0 5 20.0 6 54.0 7 20.0 8 70.0 9 84.0 10 110.0 11 34.0 12 85.0 13 66.0 14 114.0 15 221.0 16 366.0 17 495.0 18 682.0 19 905.0 20 1331.0 21 1876.0 22 3071.0 23 4519.0 24 6844.0 25 10190.0 26 14479.0 27 19353.0 28 26891.0 29 36773.0 30 49286.0 31 67415.0 32 94754.0 33 133871.0 34 275919.0 35 561133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.389480527308926 17.093208421621284 11.101963330711083 26.41534772035871 2 16.70141137505902 19.66291149214602 37.428327120476034 26.207350012318926 3 18.932867133933932 23.7333022126928 28.469360280146788 28.864470373226485 4 12.558467354392262 15.333473685495214 35.97187769834659 36.136181261765934 5 14.545586305800507 36.56363469929515 33.90984957129344 14.9809294236109 6 34.20118135554561 35.42998641357208 16.90758864171575 13.46124358916656 7 30.254221641721585 30.315942219163745 20.958675441313574 18.4711606978011 8 28.067506195749043 32.96298726666748 19.50493523458388 19.464571302999598 9 27.398781292806422 14.090605576138673 18.45490516290765 40.05570796814725 10 15.610203950802706 26.689821386596822 32.14575720665855 25.554217455941924 11 37.08543012697526 20.90360167712965 22.64560028206549 19.365367913829605 12 24.664221309410962 23.472071486249064 29.05052364532245 22.81318355901752 13 29.56705046930978 19.451207505293 25.27449546718037 25.707246558216852 14 23.495410918388764 19.335355963897953 25.4794970137577 31.68973610395558 15 25.143254010654374 27.111794605650786 22.24398211042083 25.500969273274006 16 25.772270539881468 25.551463713416705 23.737535252386095 24.93873049431573 17 24.060535428215115 25.704660440331207 25.27328941774834 24.96151471370534 18 24.74978245271209 24.96794039967635 26.075294261331543 24.206982886280016 19 25.465005511063342 24.937485306375432 25.411345157439325 24.1861640251219 20 25.685023526214707 24.365738747568756 25.079998290112883 24.869239436103655 21 26.391747068881287 24.231497313141183 24.630556912554958 24.74619870542257 22 25.660672901647903 24.343296479159225 24.927253463284753 25.068777155908116 23 24.468924811295405 24.29953342941593 25.34481337176637 25.88672838752229 24 24.765885011144697 24.845577234282924 25.25602271686361 25.132515037708774 25 24.8920843539679 24.509885493007523 25.21573587593155 25.38229427709303 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 165.0 1 165.0 2 325.0 3 485.0 4 485.0 5 485.0 6 1224.5 7 1964.0 8 1964.0 9 1964.0 10 2077.5 11 2191.0 12 2191.0 13 2191.0 14 2747.5 15 3304.0 16 3304.0 17 3304.0 18 5604.5 19 7905.0 20 7905.0 21 7905.0 22 12936.0 23 17967.0 24 17967.0 25 17967.0 26 26621.0 27 35275.0 28 35275.0 29 35275.0 30 44872.0 31 54469.0 32 54469.0 33 54469.0 34 68255.5 35 82042.0 36 82042.0 37 82042.0 38 95157.5 39 108273.0 40 108273.0 41 108273.0 42 123965.0 43 139657.0 44 139657.0 45 139657.0 46 155453.5 47 171250.0 48 171250.0 49 171250.0 50 175959.0 51 180668.0 52 180668.0 53 180668.0 54 169243.5 55 157819.0 56 157819.0 57 157819.0 58 143669.0 59 129519.0 60 129519.0 61 129519.0 62 112503.0 63 95487.0 64 95487.0 65 95487.0 66 77651.0 67 59815.0 68 59815.0 69 59815.0 70 45291.5 71 30768.0 72 30768.0 73 30768.0 74 23259.0 75 15750.0 76 15750.0 77 15750.0 78 12471.5 79 9193.0 80 9193.0 81 9193.0 82 6286.0 83 3379.0 84 3379.0 85 3379.0 86 2601.0 87 1823.0 88 1823.0 89 1823.0 90 1336.0 91 849.0 92 849.0 93 849.0 94 589.5 95 330.0 96 330.0 97 330.0 98 519.0 99 708.0 100 708.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03630663854681916 2 0.0048815648466311486 3 0.0021356846204011273 4 0.005110388198816983 5 0.010297050848362578 6 0.014339596736978998 7 0.023568805275141012 8 0.036535461899005 9 0.0495783929735976 10 0.05636681908844404 11 0.05499387897532902 12 0.062316226245275746 13 0.06353661745693354 14 0.06712151664117828 15 0.06063818832924629 16 0.06559602762660605 17 0.062087402893089914 18 0.07589307847496864 19 0.07345229605165306 20 0.0783338608982842 21 0.0743675894603964 22 0.0783338608982842 23 0.08168993673034312 24 0.07741856748954087 25 0.07657954853152614 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1311055.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.903734382841 #Duplication Level Percentage of deduplicated Percentage of total 1 79.36414499427012 45.954803712694975 2 12.361670538719991 14.315737748044668 3 3.6238529891714992 6.295038627823526 4 1.4960264376654147 3.4650206990514403 5 0.8023458983113423 2.3229411889490956 6 0.49686639515816083 1.7262251861398716 7 0.3462479309759708 1.4034333758088615 8 0.23466423114936072 1.087034824770095 9 0.1926951166801248 1.004199016780485 >10 0.9484157400429972 9.674059284164976 >50 0.06533633084265525 2.6639138344185085 >100 0.0615278221307277 7.228886909273115 >500 0.005545407341017046 2.2788146550903523 >1k 6.601675405972674E-4 0.5798909369899795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2528 0.19282181144193034 No Hit TATCAACGCAGAGTACTTTTTTTTT 1721 0.13126832970394073 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2882335218583506E-4 2 0.0 0.0 0.0 0.0 2.2882335218583506E-4 3 0.0 0.0 0.0 0.0 2.2882335218583506E-4 4 0.0 0.0 0.0 0.0 2.2882335218583506E-4 5 0.0 0.0 0.0 0.0 2.2882335218583506E-4 6 0.0 0.0 0.0 0.0 2.2882335218583506E-4 7 0.0 0.0 0.0 0.0 2.2882335218583506E-4 8 0.0 0.0 0.0 0.0 2.2882335218583506E-4 9 0.0 0.0 0.0 0.0 3.050978029144468E-4 10 0.0 0.0 0.0 7.62744507286117E-5 3.050978029144468E-4 11 0.0 0.0 0.0 7.62744507286117E-5 3.050978029144468E-4 12 0.0 0.0 0.0 7.62744507286117E-5 5.339211551002818E-4 13 0.0 0.0 0.0 7.62744507286117E-5 6.101956058288936E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGTGCG 60 7.679955E-8 17.417122 9 CGCGGTC 75 5.8411388E-8 15.2003975 10 AACCGCG 80 1.9998442E-6 13.061845 7 GTCGGCG 95 7.3769115E-8 13.000836 12 GCGTTAT 90 5.3985787E-7 12.66748 1 AAGACGG 185 0.0 12.322294 5 AATTCCG 85 3.9492443E-6 12.292093 5 TGCGTAC 55 0.0030647735 12.092609 16 CCGTGCG 55 0.0030665265 12.091686 13 GTGCGCT 55 0.0030665265 12.091686 11 CGGTCCA 190 0.0 12.000314 10 ATAACGA 80 2.8636705E-5 11.875764 12 TACCGGC 80 2.8670283E-5 11.874404 7 TTATACT 105 2.7269198E-7 11.75907 4 CTTATAC 90 7.4811614E-6 11.60787 3 TCGCGTA 75 2.072838E-4 11.400298 9 TCTATAC 110 4.983249E-7 11.224139 3 ATTCCGA 85 5.3238702E-5 11.175909 6 GCGGTCG 120 1.2738565E-7 11.083623 9 CGGTCGG 120 1.2738565E-7 11.083623 10 >>END_MODULE