##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063943_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1311055 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.232129849624922 32.0 32.0 32.0 32.0 32.0 2 31.27389163688785 32.0 32.0 32.0 32.0 32.0 3 31.393011734824245 32.0 32.0 32.0 32.0 32.0 4 31.503968178299157 32.0 32.0 32.0 32.0 32.0 5 31.41735167479625 32.0 32.0 32.0 32.0 32.0 6 35.024526812376294 36.0 36.0 36.0 36.0 36.0 7 35.04583484293184 36.0 36.0 36.0 36.0 36.0 8 34.97956149818276 36.0 36.0 36.0 36.0 36.0 9 35.12392920205483 36.0 36.0 36.0 36.0 36.0 10 34.93769063845529 36.0 36.0 36.0 36.0 36.0 11 35.12858499452731 36.0 36.0 36.0 36.0 36.0 12 35.015823134803654 36.0 36.0 36.0 36.0 36.0 13 35.06995663797476 36.0 36.0 36.0 36.0 36.0 14 35.01718387100465 36.0 36.0 36.0 36.0 36.0 15 34.97767751924977 36.0 36.0 36.0 36.0 36.0 16 34.99553718188787 36.0 36.0 36.0 36.0 36.0 17 34.95972403903726 36.0 36.0 36.0 36.0 36.0 18 34.95719782922913 36.0 36.0 36.0 36.0 36.0 19 34.9615706434894 36.0 36.0 36.0 36.0 36.0 20 34.95078848713441 36.0 36.0 36.0 36.0 36.0 21 34.94578488316661 36.0 36.0 36.0 36.0 36.0 22 34.934705256453775 36.0 36.0 36.0 36.0 36.0 23 34.878706842962345 36.0 36.0 36.0 32.0 36.0 24 34.84938465586875 36.0 36.0 36.0 32.0 36.0 25 34.82274961767432 36.0 36.0 36.0 32.0 36.0 26 34.75746402706218 36.0 36.0 36.0 32.0 36.0 27 34.756445763144946 36.0 36.0 36.0 32.0 36.0 28 34.72815938309224 36.0 36.0 36.0 32.0 36.0 29 34.707945890904654 36.0 36.0 36.0 32.0 36.0 30 34.68570273558318 36.0 36.0 36.0 32.0 36.0 31 34.688392172715865 36.0 36.0 36.0 32.0 36.0 32 34.63820663511447 36.0 36.0 36.0 32.0 36.0 33 34.61547761154185 36.0 36.0 36.0 32.0 36.0 34 34.60579151904383 36.0 36.0 36.0 32.0 36.0 35 34.56821491089237 36.0 36.0 36.0 32.0 36.0 36 34.540717208660205 36.0 36.0 36.0 32.0 36.0 37 34.53768987571078 36.0 36.0 36.0 32.0 36.0 38 34.50973757775227 36.0 36.0 36.0 32.0 36.0 39 34.49832386894524 36.0 36.0 36.0 32.0 36.0 40 34.47937729538425 36.0 36.0 36.0 32.0 36.0 41 34.459309487397555 36.0 36.0 36.0 32.0 36.0 42 34.39711224929542 36.0 36.0 36.0 32.0 36.0 43 34.392714264466406 36.0 36.0 36.0 32.0 36.0 44 34.33475636033576 36.0 36.0 36.0 32.0 36.0 45 34.29306093184496 36.0 36.0 36.0 32.0 36.0 46 34.27832928443124 36.0 36.0 36.0 32.0 36.0 47 34.25495574174997 36.0 36.0 36.0 32.0 36.0 48 34.21712742791111 36.0 36.0 36.0 32.0 36.0 49 34.19936463382543 36.0 36.0 36.0 32.0 36.0 50 33.57717563336397 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 4.0 20 12.0 21 37.0 22 131.0 23 366.0 24 1014.0 25 2378.0 26 4959.0 27 8865.0 28 14676.0 29 23219.0 30 33749.0 31 49076.0 32 72218.0 33 118634.0 34 246083.0 35 735632.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.452182529541936 18.247385640608634 11.739806687298284 26.560625142551146 2 16.113216297191254 20.493833940481203 36.83679010989682 26.55615965243073 3 18.1224347831393 24.349128064626115 28.854756763477184 28.6736803887574 4 12.361495131783181 16.08559518860765 36.10298576337377 35.4499239162354 5 14.278424627494651 36.9689296024957 33.5910392775284 15.161606492481248 6 34.35599808398141 35.83671738420749 16.5328301242056 13.274454407605496 7 30.276808031406816 30.5209629206447 20.86658586647527 18.335643181473213 8 28.014254180224462 33.26644058902227 19.235287028604468 19.484018202148807 9 27.496636268500524 13.903728631533344 18.181845918214798 40.41778918175133 10 15.491524622187235 26.946385026158765 32.16738251439895 25.394707837255048 11 37.36403125726991 20.802407221664996 22.59165328685677 19.24190823420833 12 24.518173192215105 23.626065175141793 29.0380549360361 22.817706696606997 13 29.69878272861309 19.40533024369073 25.17400215247814 25.72188487521805 14 23.451032797351132 19.395355329426543 25.384138374479708 31.769473498742613 15 25.238065453125287 27.29194254087006 22.158927950302978 25.31106405570167 16 25.82613802782524 25.64605198926043 23.662588479375152 24.865221503539175 17 24.15627109465278 25.79586668751502 25.2010785207333 24.8467836970989 18 24.876015407497807 25.023759582014414 25.99153350368026 24.10869150680752 19 25.661852477584844 24.942126760509666 25.280709047293975 24.115311714611515 20 25.81181300136456 24.31941799187977 24.99605277308899 24.87271623366668 21 26.57134902807281 24.290666676836594 24.533982174660864 24.60400212042973 22 25.70813362093952 24.319325244155078 24.959574448610734 25.012966686294668 23 24.540233874147912 24.21286193401152 25.409462818648 25.837441373192572 24 24.946912698848557 24.86377310365448 25.12936215912766 25.059952038369303 25 24.96922276615252 24.461608165768396 25.306437514206344 25.262731553872747 26 24.871565056541886 25.055855374816456 25.525810942237648 24.54676862640401 27 25.246115471749924 24.883940898723846 24.726347666231874 25.143595963294356 28 24.740042593959956 24.668874677341602 25.473842548803038 25.117240179895404 29 24.80183308212867 24.803282339803634 25.283062906936298 25.111821671131395 30 24.682990083905416 24.899923722349353 25.583829138062548 24.833257055682683 31 25.229051625959514 24.714462576347362 24.788988740217967 25.267497057475158 32 24.87362729147073 24.931216785926498 24.692620840684576 25.502535081918193 33 24.64986571288874 24.580071502833338 25.240179802089557 25.52988298218837 34 25.228448775606093 24.61579416269519 25.367043575364452 24.788713486334263 35 25.692481369325936 24.564572352613634 25.244429867049067 24.49851641101136 36 24.80971698213956 25.03779724808573 25.0003432646143 25.152142505160413 37 25.55648275136117 24.81575161593956 24.79157163757187 24.836193995127392 38 24.97559003463164 24.714937373182604 25.202907837124506 25.106564755061257 39 25.367602469879746 24.742275904942428 24.654098604495058 25.23602302068276 40 25.62004777929991 24.695582397935055 25.133177933652068 24.55119188911297 41 24.809308782474716 25.05346981739409 25.3816112645116 24.755610135619595 42 25.70888973470457 25.19105221928729 24.89349968612441 24.206558359883726 43 24.941058019046018 24.514753610696893 25.32007154652622 25.224116823730867 44 24.90465555484365 24.93875072843156 24.831431020963574 25.325162695761215 45 24.87748285522726 25.053068515782495 25.019049747490733 25.050398881499508 46 24.884404923717167 24.85839507811344 24.91224537429007 25.344954623879328 47 25.109779677888085 24.719019705804957 25.271331428985494 24.899869187321467 48 25.64685781408511 25.04565112926478 24.503634546882985 24.80385650976713 49 24.8467832296379 25.205960713961545 24.817417476513118 25.12983857988743 50 24.954501700179552 25.34762531673376 24.646577749844017 25.051295233242666 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 60.0 1 52.0 2 44.0 3 111.5 4 179.0 5 200.5 6 222.0 7 202.0 8 182.0 9 242.5 10 303.0 11 460.0 12 617.0 13 1135.0 14 1653.0 15 2125.0 16 2597.0 17 2755.5 18 2914.0 19 2995.5 20 3077.0 21 3566.0 22 4055.0 23 4530.0 24 5005.0 25 6242.5 26 7480.0 27 9205.0 28 10930.0 29 12931.0 30 14932.0 31 17339.0 32 19746.0 33 23010.5 34 26275.0 35 30826.5 36 35378.0 37 41802.5 38 48227.0 39 52956.0 40 57685.0 41 63554.5 42 69424.0 43 71672.5 44 73921.0 45 80767.5 46 87614.0 47 92404.5 48 97195.0 49 100421.5 50 103648.0 51 102210.0 52 100772.0 53 99211.0 54 97650.0 55 96747.0 56 95844.0 57 91907.5 58 87971.0 59 80564.0 60 73157.0 61 64181.0 62 55205.0 63 47653.5 64 40102.0 65 34152.5 66 28203.0 67 23848.0 68 19493.0 69 17223.0 70 14953.0 71 11727.5 72 8502.0 73 7327.0 74 6152.0 75 4803.5 76 3455.0 77 2987.0 78 2519.0 79 2061.5 80 1604.0 81 1272.0 82 940.0 83 770.0 84 600.0 85 437.0 86 274.0 87 191.5 88 109.0 89 90.0 90 71.0 91 59.0 92 47.0 93 38.0 94 29.0 95 24.0 96 19.0 97 16.0 98 13.0 99 10.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009305482988890626 2 5.339211551002818E-4 3 4.576467043716702E-4 4 0.0 5 0.0 6 2.288233521858351E-4 7 1.525489014572234E-4 8 7.62744507286117E-5 9 8.390189580147287E-4 10 0.0016780379160294574 11 0.0 12 2.288233521858351E-4 13 6.101956058288936E-4 14 3.050978029144468E-4 15 0.00541548600173143 16 0.0011441167609291755 17 0.0 18 3.813722536430585E-4 19 0.0 20 6.101956058288936E-4 21 0.0 22 2.288233521858351E-4 23 6.101956058288936E-4 24 5.339211551002818E-4 25 0.0016017634653008454 26 0.006101956058288936 27 0.006483328311931993 28 0.00541548600173143 29 0.002974703578415856 30 0.004195094790073643 31 0.00808509177723284 32 0.003966271437887808 33 0.004423918142259478 34 0.002974703578415856 35 0.003432350282787526 36 0.008619012932333121 37 0.00404254588861642 38 0.008771561833790345 39 0.004576467043716702 40 0.002059410169672516 41 0.0026696057755014094 42 0.001983135718943904 43 0.001525489014572234 44 0.001449214563843622 45 0.0010678423102005636 46 9.91567859471952E-4 47 0.001525489014572234 48 0.0019068612682152924 49 3.050978029144468E-4 50 0.0012966656623863988 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1311055.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.01696698799692 #Duplication Level Percentage of deduplicated Percentage of total 1 80.40149540939963 49.05855391180923 2 12.024989586548173 14.674567852668332 3 3.3488094120074843 6.130025800246622 4 1.3847997004831987 3.3798511043748545 5 0.7331143860969385 2.2366208147451263 6 0.4695138982648685 1.7188988418499935 7 0.2913813680712996 1.2445445121566707 8 0.22039493065183816 1.0758264166324063 9 0.17906842863842656 0.9833591158941021 >10 0.8353917562653785 8.892312408146415 >50 0.05595622896504752 2.398818408312584 >100 0.05068315354462125 6.275677695002255 >500 0.0040244489721043015 1.6917526520282327 >1k 3.7729209113477826E-4 0.23919046613317613 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 7.62744507286117E-5 3 0.0 0.0 0.0 0.0 7.62744507286117E-5 4 0.0 0.0 0.0 0.0 7.62744507286117E-5 5 0.0 0.0 0.0 0.0 1.525489014572234E-4 6 0.0 0.0 0.0 0.0 1.525489014572234E-4 7 0.0 0.0 0.0 0.0 1.525489014572234E-4 8 0.0 0.0 0.0 0.0 1.525489014572234E-4 9 0.0 0.0 0.0 0.0 1.525489014572234E-4 10 0.0 0.0 0.0 7.62744507286117E-5 1.525489014572234E-4 11 0.0 0.0 0.0 7.62744507286117E-5 2.2882335218583506E-4 12 0.0 0.0 0.0 7.62744507286117E-5 4.576467043716701E-4 13 0.0 0.0 0.0 7.62744507286117E-5 6.101956058288936E-4 14 0.0 0.0 0.0 7.62744507286117E-5 6.101956058288936E-4 15 0.0 0.0 0.0 7.62744507286117E-5 7.627445072861169E-4 16 0.0 0.0 0.0 1.525489014572234E-4 7.627445072861169E-4 17 0.0 0.0 0.0 1.525489014572234E-4 7.627445072861169E-4 18 0.0 0.0 0.0 2.2882335218583506E-4 8.390189580147286E-4 19 0.0 0.0 0.0 2.2882335218583506E-4 8.390189580147286E-4 20 0.0 0.0 0.0 2.2882335218583506E-4 0.0010678423102005636 21 0.0 0.0 0.0 2.2882335218583506E-4 0.0010678423102005636 22 0.0 0.0 0.0 3.050978029144468E-4 0.0010678423102005636 23 0.0 0.0 0.0 6.864700565575052E-4 0.0011441167609291753 24 0.0 0.0 0.0 8.390189580147286E-4 0.0011441167609291753 25 0.0 0.0 0.0 0.0011441167609291753 0.0011441167609291753 26 0.0 0.0 0.0 0.001449214563843622 0.0011441167609291753 27 0.0 0.0 0.0 0.002059410169672516 0.0011441167609291753 28 0.0 0.0 0.0 0.0033560758320589144 0.0011441167609291753 29 0.0 0.0 0.0 0.0069409750163036636 0.0011441167609291753 30 0.0 0.0 0.0 0.013805675581878715 0.0011441167609291753 31 0.0 0.0 0.0 0.029289389079786888 0.0011441167609291753 32 0.0 0.0 0.0 0.04797662950829675 0.0012203912116577871 33 0.0 0.0 0.0 0.06628249768316356 0.0013729401131150104 34 0.0 0.0 0.0 0.08374934690001563 0.001449214563843622 35 0.0 0.0 0.0 0.10625030986495608 0.001449214563843622 36 0.0 0.0 0.0 0.1369889135085866 0.001449214563843622 37 0.0 0.0 0.0 0.1846604452139689 0.001449214563843622 38 0.0 0.0 0.0 0.25666352670177833 0.001449214563843622 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATC 40 7.0299936E-4 27.501644 27 TAACGGC 110 5.2514224E-9 22.001316 36 GTATCAA 1905 0.0 21.48324 1 ACAATCG 60 0.0074115 18.33373 23 TTAACGG 135 5.5228156E-8 17.926998 35 TAGGACG 210 0.0 17.807873 4 CGGTCCA 300 0.0 17.600382 10 CTAGCGG 290 0.0 17.448654 29 GTATAAA 245 0.0 17.063547 1 GGTATCA 955 0.0 17.049438 1 CGCAATA 285 0.0 16.983473 36 GTCTATA 130 7.307535E-7 16.92538 1 TAGCGGC 295 0.0 16.407135 30 CGGGTAA 135 1.086235E-6 16.295406 44 GTATAGA 150 1.8350693E-7 16.135529 1 AATACGA 315 0.0 16.063229 39 CGACGGT 290 0.0 15.929557 7 AACGCAG 2505 0.0 15.894733 6 ACGGTAT 305 0.0 15.867986 9 CGTCTTA 125 9.436048E-6 15.840947 15 >>END_MODULE