##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063940_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1752527 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275733840334556 32.0 32.0 32.0 32.0 32.0 2 30.852955760453334 32.0 32.0 32.0 32.0 32.0 3 30.865856560269826 32.0 32.0 32.0 32.0 32.0 4 30.907873601947358 32.0 32.0 32.0 32.0 32.0 5 30.802323730247807 32.0 32.0 32.0 32.0 32.0 6 34.46637056091004 36.0 36.0 36.0 32.0 36.0 7 34.40078754849426 36.0 36.0 36.0 32.0 36.0 8 34.37079885217175 36.0 36.0 36.0 32.0 36.0 9 34.51673840117727 36.0 36.0 36.0 32.0 36.0 10 34.19872903527307 36.0 36.0 36.0 32.0 36.0 11 34.486156276051666 36.0 36.0 36.0 32.0 36.0 12 34.29155841821552 36.0 36.0 36.0 32.0 36.0 13 34.37903552983777 36.0 36.0 36.0 32.0 36.0 14 34.27739544098322 36.0 36.0 36.0 32.0 36.0 15 34.21344721079903 36.0 36.0 36.0 32.0 36.0 16 34.211947661861984 36.0 36.0 36.0 32.0 36.0 17 34.1424331836257 36.0 36.0 36.0 32.0 36.0 18 34.133864984676414 36.0 36.0 36.0 32.0 36.0 19 34.15244272984096 36.0 36.0 36.0 32.0 36.0 20 34.133733175009574 36.0 36.0 36.0 32.0 36.0 21 34.117794476204935 36.0 36.0 36.0 32.0 36.0 22 34.09045167349775 36.0 36.0 36.0 32.0 36.0 23 34.03371132085269 36.0 36.0 36.0 32.0 36.0 24 34.01590788615525 36.0 36.0 36.0 32.0 36.0 25 33.61998987747407 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 10.0 4 15.0 5 28.0 6 56.0 7 29.0 8 98.0 9 131.0 10 172.0 11 46.0 12 113.0 13 104.0 14 120.0 15 253.0 16 456.0 17 569.0 18 768.0 19 1037.0 20 1624.0 21 2412.0 22 3691.0 23 5750.0 24 8684.0 25 13047.0 26 18995.0 27 25424.0 28 34675.0 29 47491.0 30 62871.0 31 85874.0 32 122021.0 33 174714.0 34 373029.0 35 768219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.187520478211184 17.14067660580571 11.284050912686045 26.387752003297066 2 16.700068020068205 19.46264146119889 37.71923917955928 26.118051339173626 3 18.877190019263953 23.443420127635097 28.5683961618172 29.11099369128375 4 12.780151605415066 15.519240557758193 35.720570814245704 35.98003702258104 5 14.76752845440305 36.376896365768545 33.609778784671 15.245796395157402 6 34.247359446299804 35.14652875903678 16.985146243417162 13.62096555124626 7 30.553297962687314 30.198297825709773 20.62020007853379 18.62820413306912 8 27.97457790625061 33.15997492953212 19.31653292325537 19.5489142409619 9 27.612207848555087 14.159425915988264 18.378737882922486 39.84962835253417 10 16.231389406385084 26.20221993971986 31.45791951876375 26.108471135131307 11 37.014274181669535 20.720343192388015 23.0074550941621 19.25792753178035 12 25.3126944883778 23.13351109690018 28.729694699638575 22.82409971508345 13 29.73887930276457 19.376843552547886 25.042737873235527 25.841539271452014 14 23.5727740894424 19.753248555230147 24.871339683221255 31.802637672106194 15 25.11727466022322 27.641420450782327 21.80132507804988 25.439979810944568 16 25.655227228994498 25.44498809196849 23.99598250253092 24.90380217650609 17 24.0543196314286 25.87308176093447 25.220350905641226 24.852247701995704 18 24.76705347847961 24.65427064339895 26.38998419898204 24.188691679139403 19 25.937171118563775 24.479657103896127 25.03790255944349 24.54526921809661 20 26.08336878652988 24.279510146276557 24.772333372355643 24.86478769483792 21 26.816431065643748 23.941365753100026 24.151222450954922 25.09098073030131 22 26.248966380527293 24.35081844388303 24.506946379704967 24.89326879588471 23 24.593028734270106 24.303030476087137 25.278219577452322 25.825721212190434 24 25.159692504131502 24.62194020253795 25.072037222943642 25.146330070386906 25 25.000913690510178 24.411983051041037 25.230478431193394 25.356624827255388 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 97.0 1 97.0 2 256.0 3 415.0 4 415.0 5 415.0 6 1085.0 7 1755.0 8 1755.0 9 1755.0 10 2002.0 11 2249.0 12 2249.0 13 2249.0 14 3086.0 15 3923.0 16 3923.0 17 3923.0 18 6785.0 19 9647.0 20 9647.0 21 9647.0 22 16245.0 23 22843.0 24 22843.0 25 22843.0 26 35486.0 27 48129.0 28 48129.0 29 48129.0 30 61708.0 31 75287.0 32 75287.0 33 75287.0 34 93161.5 35 111036.0 36 111036.0 37 111036.0 38 127189.0 39 143342.0 40 143342.0 41 143342.0 42 163409.0 43 183476.0 44 183476.0 45 183476.0 46 204560.5 47 225645.0 48 225645.0 49 225645.0 50 231621.0 51 237597.0 52 237597.0 53 237597.0 54 222002.0 55 206407.0 56 206407.0 57 206407.0 58 190301.5 59 174196.0 60 174196.0 61 174196.0 62 152646.5 63 131097.0 64 131097.0 65 131097.0 66 107595.0 67 84093.0 68 84093.0 69 84093.0 70 63802.5 71 43512.0 72 43512.0 73 43512.0 74 33239.5 75 22967.0 76 22967.0 77 22967.0 78 18442.5 79 13918.0 80 13918.0 81 13918.0 82 9698.0 83 5478.0 84 5478.0 85 5478.0 86 4143.0 87 2808.0 88 2808.0 89 2808.0 90 2033.5 91 1259.0 92 1259.0 93 1259.0 94 860.0 95 461.0 96 461.0 97 461.0 98 675.5 99 890.0 100 890.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.037945207120917396 2 0.005877227569104499 3 0.0017688743169149465 4 0.004736018332385178 5 0.009243794817426492 6 0.01386569222613974 7 0.023680091661925893 8 0.037945207120917396 9 0.049471420411782534 10 0.059228759385732715 11 0.05551982936639493 12 0.06487774510749335 13 0.06579071249686881 14 0.06904315882151887 15 0.06179648016835118 16 0.06778782866112762 17 0.06367947540893806 18 0.07840107456261729 19 0.07566217239449093 20 0.07942816287566469 21 0.07600453516550673 22 0.07982758610851644 23 0.08456360444090162 24 0.07697456301671814 25 0.07914286056648485 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1752527.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.17360169626131 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31975685145433 43.51210516011242 2 11.389697951905546 12.340419205745084 3 3.2937963555173693 5.353104354971851 4 1.4873610344930162 3.2230281704465535 5 0.8201954614499234 2.22164711208347 6 0.5491362685273429 1.784921369290288 7 0.37671939547283606 1.4285772537121237 8 0.273564123400575 1.18559630875917 9 0.20417307336141893 0.9954711678044743 >10 1.1162910558703547 10.874024360955138 >50 0.08156062254730093 3.0675086547101125 >100 0.07580189130566006 8.58025876458545 >500 0.008985865035671874 3.270128240899797 >1k 0.0029600496588095583 2.1632098759241183 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3128 0.17848512462290167 No Hit TATCAACGCAGAGTACTTTTTTTTT 2079 0.11862870015697333 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.706046183596601E-5 7 0.0 0.0 0.0 0.0 5.706046183596601E-5 8 0.0 0.0 0.0 0.0 5.706046183596601E-5 9 0.0 0.0 0.0 0.0 5.706046183596601E-5 10 0.0 0.0 0.0 0.0 5.706046183596601E-5 11 0.0 0.0 0.0 0.0 5.706046183596601E-5 12 0.0 0.0 0.0 0.0 1.7118138550789802E-4 13 0.0 0.0 0.0 0.0 2.2824184734386403E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGTA 40 2.7589628E-4 16.6269 13 CTACCGA 40 0.0052844607 14.247965 4 GCGTTAT 120 3.6379788E-12 14.247151 1 GCTACCG 40 0.0052954825 14.243491 3 CGTTATT 105 1.382432E-9 13.564455 2 GGTATCA 745 0.0 13.386585 1 CGCATCG 300 0.0 13.301519 13 GCATCGC 320 0.0 13.064738 14 GTATCAA 2110 0.0 12.784175 1 AACCGCG 135 2.7284841E-11 12.667028 7 TAAGGGA 60 4.0974194E-4 12.664858 4 TCGCCAG 340 0.0 12.574966 17 ATCGCCA 330 0.0 12.380556 16 CGGTCCA 340 0.0 12.29482 10 GTAATAC 85 3.964313E-6 12.288503 3 ACCGTTT 55 0.0030674 12.0916 8 TACTCCG 55 0.003071339 12.089527 5 CATCGCC 375 0.0 11.908708 15 TCTTATA 115 7.125345E-8 11.559277 2 CGCCAGT 355 0.0 11.241363 18 >>END_MODULE