##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063939_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109518 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.295505796210605 32.0 32.0 32.0 32.0 32.0 2 31.39360244718878 32.0 32.0 32.0 32.0 32.0 3 31.476807947234747 32.0 32.0 32.0 32.0 32.0 4 31.559867437932507 32.0 32.0 32.0 32.0 32.0 5 31.505777283469037 32.0 32.0 32.0 32.0 32.0 6 35.09181013737497 36.0 36.0 36.0 36.0 36.0 7 35.11334651623498 36.0 36.0 36.0 36.0 36.0 8 35.05829918937773 36.0 36.0 36.0 36.0 36.0 9 35.177082300602606 36.0 36.0 36.0 36.0 36.0 10 35.02146247289363 36.0 36.0 36.0 36.0 36.0 11 35.17928325633293 36.0 36.0 36.0 36.0 36.0 12 35.080334884156905 36.0 36.0 36.0 36.0 36.0 13 35.11731039965102 36.0 36.0 36.0 36.0 36.0 14 35.07056397462682 36.0 36.0 36.0 36.0 36.0 15 35.03493318720381 36.0 36.0 36.0 36.0 36.0 16 35.05000459659059 36.0 36.0 36.0 36.0 36.0 17 35.0090165278977 36.0 36.0 36.0 36.0 36.0 18 35.00765557656568 36.0 36.0 36.0 36.0 36.0 19 35.013278739056055 36.0 36.0 36.0 36.0 36.0 20 35.010586579037025 36.0 36.0 36.0 36.0 36.0 21 34.99626234094445 36.0 36.0 36.0 36.0 36.0 22 34.9856631438156 36.0 36.0 36.0 36.0 36.0 23 34.93437150185937 36.0 36.0 36.0 36.0 36.0 24 34.90394928248122 36.0 36.0 36.0 32.0 36.0 25 34.88371887612459 36.0 36.0 36.0 32.0 36.0 26 34.82045536890794 36.0 36.0 36.0 32.0 36.0 27 34.81892497462862 36.0 36.0 36.0 32.0 36.0 28 34.79545171867424 36.0 36.0 36.0 32.0 36.0 29 34.770188496265945 36.0 36.0 36.0 32.0 36.0 30 34.75290621693384 36.0 36.0 36.0 32.0 36.0 31 34.74172748887354 36.0 36.0 36.0 32.0 36.0 32 34.69471157745976 36.0 36.0 36.0 32.0 36.0 33 34.684407102904146 36.0 36.0 36.0 32.0 36.0 34 34.66436596792481 36.0 36.0 36.0 32.0 36.0 35 34.62102462510748 36.0 36.0 36.0 32.0 36.0 36 34.59662934715796 36.0 36.0 36.0 32.0 36.0 37 34.58186888360531 36.0 36.0 36.0 32.0 36.0 38 34.54129811323475 36.0 36.0 36.0 32.0 36.0 39 34.54490238103393 36.0 36.0 36.0 32.0 36.0 40 34.53124690180781 36.0 36.0 36.0 32.0 36.0 41 34.50244700852082 36.0 36.0 36.0 32.0 36.0 42 34.436811300042 36.0 36.0 36.0 32.0 36.0 43 34.43221470945041 36.0 36.0 36.0 32.0 36.0 44 34.366706083182066 36.0 36.0 36.0 32.0 36.0 45 34.32553955861915 36.0 36.0 36.0 32.0 36.0 46 34.30146784459558 36.0 36.0 36.0 32.0 36.0 47 34.263811853435456 36.0 36.0 36.0 32.0 36.0 48 34.22574487299891 36.0 36.0 36.0 32.0 36.0 49 34.209123240902805 36.0 36.0 36.0 32.0 36.0 50 33.604971708435556 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 2.0 19 2.0 20 6.0 21 26.0 22 104.0 23 322.0 24 926.0 25 2076.0 26 4184.0 27 7689.0 28 12639.0 29 19334.0 30 27748.0 31 39124.0 32 56971.0 33 92104.0 34 192128.0 35 654130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.047523545896134 17.867569713789706 11.51204808960285 26.57285865071131 2 15.982403106224888 20.56260669085744 37.18078365843063 26.274206544487043 3 18.128281276053052 24.534774203142813 28.980770877365337 28.356173643438797 4 12.142840404572075 15.944130694589903 36.3224391132005 35.59058978763752 5 13.943982882657155 37.36703685744621 33.62811599271035 15.060864267186291 6 33.80272677209993 36.196921723596844 16.859318063625885 13.14103344067734 7 29.938162281425164 30.734454722189923 20.968493497621036 18.35888949876388 8 28.062365820112877 33.040653689259656 19.490445400615403 19.40653509001206 9 27.7423617113516 13.615752553607047 18.371820327730553 40.2700654073108 10 15.378604409698344 27.088739253129084 32.21659310559896 25.316063231573604 11 37.271049230386524 20.971809380289457 22.636406079036124 19.12073531028789 12 24.42161769490688 23.787017233625082 29.31194384583562 22.479421225632414 13 29.7653919297708 19.51474074140837 25.316761453254138 25.403105875566688 14 23.49091584243191 19.389210050526625 25.76272133564786 31.357152771393604 15 25.151085517332135 27.306346898657107 22.457189056766694 25.085378527244067 16 25.453331158197006 25.769146532385044 24.02504170763824 24.752480601779705 17 23.949859308276206 25.757581219953167 25.593906543201644 24.698652928568983 18 24.581190880700127 25.029314610437893 26.445248599613347 23.944245909248636 19 25.340463156073177 24.800679213856828 25.794714461595035 24.06414316847496 20 25.748931514158453 24.27477255807498 25.35632718469528 24.61996874307129 21 26.568834394755196 24.086134699932764 24.913701264873573 24.43132964043846 22 25.61562768697759 24.28847481519002 25.364978305894994 24.7309191919374 23 24.384750371560752 24.13752389570522 25.632779905345515 25.84494582738851 24 24.612646066073914 24.857798227153303 25.663555697759833 24.866000009012946 25 24.76964662173916 24.500964856857784 25.641668116280346 25.08772040512271 26 24.630068114156334 25.12769714302711 25.84642452506217 24.395810217754388 27 25.13864865668763 24.773605874574905 25.235452594462704 24.85229287427476 28 24.471708640048025 24.700285631105938 25.988554926528177 24.83945080231786 29 24.50754445056337 24.881770108995926 25.745138987157173 24.86554645328353 30 24.60751813014769 24.994276587728645 25.839538954355113 24.558666327768556 31 25.02034823193469 24.767606516121297 25.116974166083033 25.095071085860976 32 24.7654302293511 24.98174817346536 25.01527745480307 25.237544142380468 33 24.638882930109222 24.540998707495625 25.48351741455861 25.33660094783654 34 24.980148518822627 24.808447853020624 25.620263021985796 24.59114060617095 35 25.568801989398647 24.557518335149496 25.50111268241637 24.372566993035484 36 24.687768155236192 25.23381333871747 25.285551525465284 24.792866980581056 37 25.415804772527544 24.893575790351292 25.12999391604137 24.56062552107979 38 24.757308681724194 24.835005957992994 25.427109679350014 24.9805756809328 39 25.076027566414833 24.821310432225953 25.021496828203837 25.081165173155373 40 25.376139595040986 24.98100487158572 25.453201681846245 24.189653851527044 41 24.582213060748444 25.223325945468 25.654339837599156 24.540121156184398 42 25.466698392783748 25.337450518073073 25.234070244507418 23.961780844635765 43 24.810274898602973 24.572960793150067 25.581433077963045 25.035331230283912 44 24.589728059644457 25.18701983221392 25.071923771617687 25.15132833652394 45 24.741191124698737 25.36579342518202 25.09792646457072 24.795088985548524 46 24.595518550130823 25.00299682651844 25.07483053284026 25.32665409051047 47 24.692608729353275 25.028526414648788 25.46466960733593 24.814195248662006 48 25.25777470130582 25.27372789086216 24.857052211094047 24.61144519673798 49 24.70031869867113 25.314372444822585 24.975304458176208 25.010004398330075 50 24.71052145345405 25.637429641413434 24.794613765722243 24.85743513941027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 72.0 1 58.5 2 45.0 3 136.0 4 227.0 5 254.0 6 281.0 7 267.0 8 253.0 9 324.5 10 396.0 11 591.5 12 787.0 13 1404.5 14 2022.0 15 2608.5 16 3195.0 17 3403.5 18 3612.0 19 3594.0 20 3576.0 21 3947.5 22 4319.0 23 4909.5 24 5500.0 25 6244.5 26 6989.0 27 8413.5 28 9838.0 29 11677.5 30 13517.0 31 15871.5 32 18226.0 33 21098.5 34 23971.0 35 27329.5 36 30688.0 37 35576.0 38 40464.0 39 44746.0 40 49028.0 41 53529.0 42 58030.0 43 59990.5 44 61951.0 45 68036.0 46 74121.0 47 77822.5 48 81524.0 49 84240.5 50 86957.0 51 85551.0 52 84145.0 53 82824.5 54 81504.0 55 80552.0 56 79600.0 57 76186.5 58 72773.0 59 66400.0 60 60027.0 61 52350.5 62 44674.0 63 38946.5 64 33219.0 65 28151.5 66 23084.0 67 20058.0 68 17032.0 69 15252.0 70 13472.0 71 10550.5 72 7629.0 73 6282.0 74 4935.0 75 3858.0 76 2781.0 77 2452.5 78 2124.0 79 1699.0 80 1274.0 81 980.0 82 686.0 83 597.5 84 509.0 85 367.0 86 225.0 87 155.0 88 85.0 89 70.0 90 55.0 91 47.0 92 39.0 93 29.0 94 19.0 95 20.0 96 21.0 97 14.0 98 7.0 99 8.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008021501228461368 2 3.605169091443311E-4 3 2.7038768185824833E-4 4 0.0 5 0.0 6 9.012922728608278E-5 7 9.012922728608278E-5 8 0.0 9 8.11163045574745E-4 10 8.11163045574745E-4 11 0.0 12 9.012922728608278E-5 13 7.210338182886622E-4 14 3.605169091443311E-4 15 0.004236073682445891 16 8.11163045574745E-4 17 0.0 18 2.7038768185824833E-4 19 0.0 20 3.605169091443311E-4 21 0.0 22 0.0 23 8.11163045574745E-4 24 2.7038768185824833E-4 25 0.0024334891367242353 26 0.005137365955306719 27 0.005317624409878884 28 0.004055815227873726 29 0.0024334891367242353 30 0.0036051690914433113 31 0.007660984319317036 32 0.0036051690914433113 33 0.003965686000587642 34 0.0026137475912964008 35 0.003334781409585063 36 0.00775111354660312 37 0.00387555677330156 38 0.007570855092030954 39 0.004686719818876304 40 0.002072972227579904 41 0.0036952983187293945 42 0.001982843000293821 43 0.00162232609114949 44 9.012922728608278E-4 45 0.0010815507274329933 46 9.914215001469106E-4 47 0.0018025845457216557 48 0.001982843000293821 49 5.407753637164967E-4 50 0.002072972227579904 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1109518.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.10192464600358 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7196744490406 46.524842674451314 2 13.010054749899547 15.378385509378878 3 3.7092146586612396 6.576651757561454 4 1.5670494937674144 3.704625643887991 5 0.7629254470254508 2.2545181140308395 6 0.47414739953093 1.6813814326905343 7 0.3234427859931946 1.3381263815544275 8 0.2308734966480027 1.0916054401319693 9 0.1656541595476344 0.8811431689393209 >10 0.913953119817287 9.76903380932436 >50 0.06528535316105955 2.7373012821492013 >100 0.05265860923675473 6.064391670647414 >500 0.005066277670901451 1.9979931152522679 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8025845457216556E-4 2 0.0 0.0 0.0 0.0 1.8025845457216556E-4 3 0.0 0.0 0.0 0.0 1.8025845457216556E-4 4 0.0 0.0 0.0 1.8025845457216556E-4 1.8025845457216556E-4 5 0.0 0.0 0.0 1.8025845457216556E-4 1.8025845457216556E-4 6 0.0 0.0 0.0 1.8025845457216556E-4 4.506461364304139E-4 7 0.0 0.0 0.0 1.8025845457216556E-4 4.506461364304139E-4 8 0.0 0.0 0.0 1.8025845457216556E-4 4.506461364304139E-4 9 0.0 0.0 0.0 1.8025845457216556E-4 4.506461364304139E-4 10 0.0 0.0 0.0 2.703876818582484E-4 4.506461364304139E-4 11 0.0 0.0 0.0 3.605169091443311E-4 4.506461364304139E-4 12 0.0 0.0 0.0 3.605169091443311E-4 9.012922728608278E-4 13 0.0 0.0 0.0 3.605169091443311E-4 9.012922728608278E-4 14 0.0 0.0 0.0 3.605169091443311E-4 9.012922728608278E-4 15 0.0 0.0 0.0 3.605169091443311E-4 0.0011716799547190763 16 0.0 0.0 0.0 3.605169091443311E-4 0.0011716799547190763 17 0.0 0.0 0.0 3.605169091443311E-4 0.0011716799547190763 18 0.0 0.0 0.0 3.605169091443311E-4 0.001261809182005159 19 0.0 0.0 0.0 3.605169091443311E-4 0.001261809182005159 20 0.0 0.0 0.0 3.605169091443311E-4 0.0015321968638634074 21 0.0 0.0 0.0 3.605169091443311E-4 0.001712455318435573 22 0.0 0.0 0.0 7.210338182886622E-4 0.001712455318435573 23 0.0 0.0 0.0 0.0014420676365773245 0.001712455318435573 24 0.0 0.0 0.0 0.0024334891367242353 0.001712455318435573 25 0.0 0.0 0.0 0.0026137475912964008 0.001712455318435573 26 0.0 0.0 0.0 0.003064393727726815 0.001982843000293821 27 0.0 0.0 0.0 0.003965686000587642 0.002163101454865987 28 0.0 0.0 0.0 0.006309045910025795 0.002163101454865987 29 0.0 0.0 0.0 0.012077316456335094 0.002163101454865987 30 0.0 0.0 0.0 0.021450756094087704 0.002163101454865987 31 0.0 0.0 0.0 0.04209034914260066 0.002163101454865987 32 0.0 0.0 0.0 0.0670561451008456 0.002163101454865987 33 0.0 0.0 0.0 0.08967858114965237 0.00225323068215207 34 0.0 0.0 0.0 0.11473450633518338 0.00225323068215207 35 0.0 0.0 0.0 0.14537844361245153 0.00225323068215207 36 0.0 0.0 0.0 0.1843142698000393 0.00225323068215207 37 0.0 0.0 0.0 0.24749485812758332 0.00225323068215207 38 0.0 0.0 0.0 0.337443826959094 0.0023433599094381525 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCATA 50 0.0025792161 22.001598 37 GTAATAC 165 0.0 21.332 3 TAGTACG 75 5.4747466E-5 20.532051 4 CGTGCGG 65 4.93389E-4 20.306423 10 GTATCAA 2160 0.0 19.658836 1 AATCACG 135 2.5956979E-9 19.556978 34 GTATAGG 120 3.158966E-7 18.334667 1 GTCCTAA 195 1.8189894E-12 18.052595 1 ACCGTCG 275 0.0 17.5989 8 GTATATG 165 1.6570993E-9 17.334595 1 ATACCGT 270 0.0 17.110043 6 GTAGCAC 155 1.4397301E-8 17.031195 3 GTATTAG 300 0.0 16.867893 1 TATGGTA 105 3.7759153E-5 16.760857 2 CGTGATT 80 0.001987245 16.5012 28 CGTCGTA 280 0.0 16.49897 10 TACGAGC 215 1.2732926E-11 16.371069 14 AACGCAG 2620 0.0 16.28906 6 GTATTGG 205 1.05501385E-10 16.098732 1 GTCTTAG 330 0.0 16.001163 1 >>END_MODULE