##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063936_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1285221 Sequences flagged as poor quality 0 Sequence length 25 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.341103203262318 32.0 32.0 32.0 32.0 32.0 2 31.013722153621828 32.0 32.0 32.0 32.0 32.0 3 31.03052782361944 32.0 32.0 32.0 32.0 32.0 4 31.042763851508806 32.0 32.0 32.0 32.0 32.0 5 31.01915935080426 32.0 32.0 32.0 32.0 32.0 6 34.688226382855554 36.0 36.0 36.0 32.0 36.0 7 34.60136894744172 36.0 36.0 36.0 32.0 36.0 8 34.57716610606269 36.0 36.0 36.0 32.0 36.0 9 34.667118728996805 36.0 36.0 36.0 32.0 36.0 10 34.43135460749552 36.0 36.0 36.0 32.0 36.0 11 34.6549729579582 36.0 36.0 36.0 32.0 36.0 12 34.50832580544513 36.0 36.0 36.0 32.0 36.0 13 34.57419930113187 36.0 36.0 36.0 32.0 36.0 14 34.491754336413734 36.0 36.0 36.0 32.0 36.0 15 34.45933500930968 36.0 36.0 36.0 32.0 36.0 16 34.45281006146025 36.0 36.0 36.0 32.0 36.0 17 34.3980194845867 36.0 36.0 36.0 32.0 36.0 18 34.397731596355804 36.0 36.0 36.0 32.0 36.0 19 34.35378273464252 36.0 36.0 36.0 32.0 36.0 20 34.34607433274122 36.0 36.0 36.0 32.0 36.0 21 34.31848919368731 36.0 36.0 36.0 32.0 36.0 22 34.29724615455241 36.0 36.0 36.0 32.0 36.0 23 34.263131399191266 36.0 36.0 36.0 32.0 36.0 24 34.24026295866625 36.0 36.0 36.0 32.0 36.0 25 33.893359196589536 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 16.0 5 12.0 6 44.0 7 17.0 8 76.0 9 69.0 10 131.0 11 51.0 12 76.0 13 72.0 14 127.0 15 214.0 16 347.0 17 463.0 18 559.0 19 675.0 20 1028.0 21 1405.0 22 2263.0 23 3351.0 24 5206.0 25 7829.0 26 11386.0 27 15503.0 28 21586.0 29 29598.0 30 40187.0 31 55246.0 32 80227.0 33 116155.0 34 264905.0 35 626395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.35327816726822 20.42426134112539 12.522193430977943 24.700267060628445 2 12.676934186046331 21.51378084943972 45.29110541702039 20.518179547493567 3 17.348455257477834 28.42931594976027 30.109757407029893 24.112471385732004 4 10.338849585892005 17.613906932301667 40.627324591572176 31.41991889023415 5 10.918978983138421 40.72014012797338 36.00871831304844 12.352162575839753 6 28.4463760446983 40.11050067701119 19.920081552612327 11.523041725678178 7 26.656191559055557 32.88187642952922 23.66214742818987 16.799784583225353 8 23.92970865534373 39.46404289649407 21.009334766537435 15.59691368162476 9 27.69891980930851 14.748775482878557 21.305741607425883 36.24656310038705 10 14.967476731557497 29.31251532739312 34.43791773228543 21.28209020876396 11 33.32422475912882 22.20335631496671 27.393453037125614 17.07896588877886 12 24.94822404584313 25.18506983914418 32.81427614880331 17.052429966209377 13 28.932136800848347 23.559575140651738 26.789309689203645 20.718978369296266 14 19.92128099414863 24.478885631640214 28.323191740344072 27.276641633867083 15 20.593497454103797 36.28540508556391 23.462730259572414 19.658367200759876 16 19.573687472553484 28.797974953204665 31.536241859480064 20.092095714761786 17 19.19827215706304 31.257902670246096 29.437485596118268 20.106339576572594 18 19.747686490224233 27.22107840236226 34.52977582861183 18.50145927880168 19 23.495671661432585 26.360465686713475 28.71880088240951 21.42506176944443 20 24.463604202860516 27.399735082422694 29.40094519975112 18.735715514965662 21 23.058869700504427 26.61019166408405 27.122640407529513 23.208298227882008 22 23.65373443951091 30.527682213268836 27.56571887785376 18.252864469366493 23 19.360983203400906 30.378490011517535 30.121117115180795 20.139409669900765 24 22.612818020981287 27.248962771921953 30.88759313249109 19.250626074605666 25 20.538116452250186 29.134788421899373 30.466062858642424 19.861032267208024 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 115.0 1 115.0 2 346.5 3 578.0 4 578.0 5 578.0 6 1471.0 7 2364.0 8 2364.0 9 2364.0 10 2788.0 11 3212.0 12 3212.0 13 3212.0 14 4452.5 15 5693.0 16 5693.0 17 5693.0 18 10719.5 19 15746.0 20 15746.0 21 15746.0 22 28173.0 23 40600.0 24 40600.0 25 40600.0 26 62375.0 27 84150.0 28 84150.0 29 84150.0 30 110931.0 31 137712.0 32 137712.0 33 137712.0 34 151666.5 35 165621.0 36 165621.0 37 165621.0 38 169890.0 39 174159.0 40 174159.0 41 174159.0 42 172836.0 43 171513.0 44 171513.0 45 171513.0 46 167512.5 47 163512.0 48 163512.0 49 163512.0 50 145074.0 51 126636.0 52 126636.0 53 126636.0 54 97747.5 55 68859.0 56 68859.0 57 68859.0 58 56975.5 59 45092.0 60 45092.0 61 45092.0 62 38513.0 63 31934.0 64 31934.0 65 31934.0 66 26441.0 67 20948.0 68 20948.0 69 20948.0 70 15619.5 71 10291.0 72 10291.0 73 10291.0 74 8469.5 75 6648.0 76 6648.0 77 6648.0 78 5867.5 79 5087.0 80 5087.0 81 5087.0 82 3528.0 83 1969.0 84 1969.0 85 1969.0 86 1618.0 87 1267.0 88 1267.0 89 1267.0 90 948.5 91 630.0 92 630.0 93 630.0 94 446.5 95 263.0 96 263.0 97 263.0 98 442.5 99 622.0 100 622.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03843696920607429 2 0.0052909188380831 3 0.0017895754893516367 4 0.0038125738686187044 5 0.008558839296899132 6 0.012527028425461459 7 0.02100806009238878 8 0.03532466400720188 9 0.049252229772155924 10 0.05882256825868858 11 0.055788070689787986 12 0.06543621680629245 13 0.06559183206623609 14 0.07049371275446013 15 0.06232391160742004 16 0.07041590512448832 17 0.0657474473261797 18 0.07975282072110555 19 0.0785857062715284 20 0.0815423962104572 21 0.07741859182195124 22 0.08084212754071089 23 0.08496593192921685 24 0.08006405124099279 25 0.08076431991073908 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1285221.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.175963128117985 #Duplication Level Percentage of deduplicated Percentage of total 1 82.56387610967204 44.72977507832094 2 11.581024675749306 12.548263316384379 3 2.7637957546059626 4.49193890685545 4 0.9913158337275247 2.148219602253677 5 0.4614855943020698 1.2500713270533275 6 0.2868414554053038 0.9323947266992064 7 0.1781922016102683 0.6757613900909243 8 0.14301091508260722 0.6198203249946993 9 0.1113133403763504 0.5427456681507126 >10 0.7133171749549219 7.78333741330625 >50 0.09551445691228994 3.6612124528167014 >100 0.0943063683649013 10.72317270699604 >500 0.010959144702458394 3.9930944102793298 >1k 0.004470177444423819 4.045513832537369 >5k 5.767970896030733E-4 1.8546788432609769 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 6784 0.5278469617287611 No Hit GTCCTACAGTGGACATTTCTAAATT 5752 0.44754948759785285 No Hit CTGTAGGACGTGGAATATGGCAAGA 5684 0.4422585687597697 No Hit CTTTAGGACGTGAAATATGGCGAGG 5521 0.4295759250743646 No Hit GTATCAACGCAGAGTACTTTTTTTT 4271 0.3323163876096018 No Hit GTCCTACAGTGTGCATTTCTCATTT 3893 0.3029051034802575 No Hit CTGTAGGACCTGGAATATGGCGAGA 3005 0.23381192806528994 No Hit ATTTAGAAATGTCCACTGTAGGACG 2767 0.21529371213199908 No Hit TATCAACGCAGAGTACTTTTTTTTT 2762 0.21490467398214003 No Hit CTGAAGGACCTGGAATATGGCGAGA 2656 0.2066570652051281 No Hit GTCCTTCAGTGTGCATTTCTCATTT 2321 0.1805915091645717 No Hit TTTCTAAATTTTCCACCTTTTTCAG 2142 0.16666394339961765 No Hit GAATATGGCAAGAAAACTGAAAATC 1910 0.14861257324615768 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1558 0.12122428749608044 No Hit GGAATATGGCGAGAAAACTGAAAAT 1526 0.11873444333698252 No Hit CTGTAGGACATGGAATATGGCAAGA 1444 0.11235421767929407 No Hit GGTATCAACGCAGAGTACTTTTTTT 1438 0.11188737189946321 No Hit GCCATATTCCACGTCCTACAGTGGA 1353 0.10527372335185933 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 7.78076299718103E-5 0.0 13 0.0 0.0 0.0 7.78076299718103E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATCGCC 110 0.0 17.275808 15 CGGAATT 40 2.756895E-4 16.627964 15 TCGCGTA 65 1.910339E-7 16.078537 9 GTCGCGT 65 1.9120307E-7 16.077286 8 CGCATCG 120 0.0 15.836157 13 ATCGCCA 120 0.0 15.835542 16 CCGCATC 125 0.0 15.202711 12 GCATCGC 125 0.0 15.202711 14 TCGCCAG 130 0.0 14.617422 17 GGGTCGC 80 1.2886812E-7 14.249211 6 CGCGTAA 75 9.657997E-7 13.934733 10 ACGATCA 55 1.9580647E-4 13.819571 9 CGAACGA 90 3.630157E-8 13.724134 16 CGCCAGT 140 0.0 13.572791 18 GGTCGCG 85 2.698307E-7 13.411544 7 AGGCCCG 220 0.0 13.387709 10 CCACCTT 740 0.0 13.22533 13 ATCGCTC 65 5.443923E-5 13.15568 16 CGGTCCA 210 0.0 13.120364 10 GTTTTCG 80 1.994631E-6 13.064829 15 >>END_MODULE