##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063935_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 852277 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24370128491089 32.0 32.0 32.0 32.0 32.0 2 31.362011411782788 32.0 32.0 32.0 32.0 32.0 3 31.44444939849368 32.0 32.0 32.0 32.0 32.0 4 31.542618186340825 32.0 32.0 32.0 32.0 32.0 5 31.47249427122872 32.0 32.0 32.0 32.0 32.0 6 35.05247941690319 36.0 36.0 36.0 36.0 36.0 7 35.07317925979464 36.0 36.0 36.0 36.0 36.0 8 35.02149770555817 36.0 36.0 36.0 36.0 36.0 9 35.13135518147269 36.0 36.0 36.0 36.0 36.0 10 34.9786325337889 36.0 36.0 36.0 36.0 36.0 11 35.13848314573783 36.0 36.0 36.0 36.0 36.0 12 35.03673688249243 36.0 36.0 36.0 36.0 36.0 13 35.08485386793261 36.0 36.0 36.0 36.0 36.0 14 35.03038214101753 36.0 36.0 36.0 36.0 36.0 15 34.982132569575384 36.0 36.0 36.0 36.0 36.0 16 34.99588631395661 36.0 36.0 36.0 36.0 36.0 17 34.96608966333716 36.0 36.0 36.0 36.0 36.0 18 34.959775988323045 36.0 36.0 36.0 36.0 36.0 19 34.96085075626821 36.0 36.0 36.0 36.0 36.0 20 34.957390613615054 36.0 36.0 36.0 36.0 36.0 21 34.95210712010297 36.0 36.0 36.0 36.0 36.0 22 34.9287731570839 36.0 36.0 36.0 36.0 36.0 23 34.881021076481005 36.0 36.0 36.0 32.0 36.0 24 34.85074922824387 36.0 36.0 36.0 32.0 36.0 25 34.826867321305166 36.0 36.0 36.0 32.0 36.0 26 34.76583786726616 36.0 36.0 36.0 32.0 36.0 27 34.75328561019481 36.0 36.0 36.0 32.0 36.0 28 34.7311918542915 36.0 36.0 36.0 32.0 36.0 29 34.70749650641751 36.0 36.0 36.0 32.0 36.0 30 34.69564237917954 36.0 36.0 36.0 32.0 36.0 31 34.669847948495615 36.0 36.0 36.0 32.0 36.0 32 34.63288109382278 36.0 36.0 36.0 32.0 36.0 33 34.600113578097265 36.0 36.0 36.0 32.0 36.0 34 34.57709172018018 36.0 36.0 36.0 32.0 36.0 35 34.52548173891822 36.0 36.0 36.0 32.0 36.0 36 34.496453617779196 36.0 36.0 36.0 32.0 36.0 37 34.47871877335655 36.0 36.0 36.0 32.0 36.0 38 34.43865668086784 36.0 36.0 36.0 32.0 36.0 39 34.44386742807796 36.0 36.0 36.0 32.0 36.0 40 34.40975527909353 36.0 36.0 36.0 32.0 36.0 41 34.39035313636294 36.0 36.0 36.0 32.0 36.0 42 34.31864757584682 36.0 36.0 36.0 32.0 36.0 43 34.30371815735964 36.0 36.0 36.0 32.0 36.0 44 34.22576110818431 36.0 36.0 36.0 32.0 36.0 45 34.18505837890733 36.0 36.0 36.0 32.0 36.0 46 34.16498861285709 36.0 36.0 36.0 32.0 36.0 47 34.10398379869456 36.0 36.0 36.0 32.0 36.0 48 34.05348026521894 36.0 36.0 36.0 32.0 36.0 49 34.02685981200948 36.0 36.0 36.0 32.0 36.0 50 33.4048085305599 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 35.0 22 102.0 23 286.0 24 810.0 25 1823.0 26 3574.0 27 6473.0 28 10879.0 29 16234.0 30 22768.0 31 32364.0 32 46186.0 33 74502.0 34 151720.0 35 484510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.598283016033946 17.703991588749954 11.281377905448538 26.416347489767567 2 16.229836344095105 20.507910582956697 36.615368730317414 26.646884342630788 3 18.106212695257728 25.02384804833204 28.680548792578886 28.189390463831337 4 12.179021609171665 15.657350837814466 35.78226327825343 36.381364274760436 5 14.18940086380367 37.057670217546644 33.216430808293545 15.53649811035614 6 34.23343404417588 35.68777683259511 16.646856941714823 13.431932181514183 7 29.980663540918666 30.508778846289232 21.180579999906136 18.329977612885965 8 28.74370656488442 32.239635705293 19.33702305705774 19.67963467276484 9 28.075760117990917 13.311172880862731 18.17935417104224 40.43371283010411 10 15.825093602636715 26.505474184914927 31.572160563575284 26.097271648873072 11 37.50224398875014 20.647395154392292 22.569422851960102 19.280938004897468 12 24.823267552685337 23.507263483585735 28.953028182152046 22.716440781576882 13 29.81047108255473 19.160337498283997 25.39884614166151 25.63034527749976 14 23.92889618961016 19.02155994250682 25.527793259217972 31.521750608665045 15 25.467561405752598 26.823515883417954 22.48929586818752 25.21962684264193 16 25.95973107113943 25.187675267227522 23.709387870041184 25.143205791591868 17 24.150481592252284 25.333782326637937 25.259276033496153 25.256460047613626 18 25.059517174620865 24.431081517115956 26.18908216244757 24.32031914581561 19 25.65929346831308 24.417559569904583 25.72687720879152 24.196269752990816 20 26.109800884696167 23.46169641076185 25.13428842972297 25.29421427481901 21 27.20418361635947 23.57742846515863 24.687278901108442 24.53110901737346 22 26.190546031395893 23.53917799025434 25.16916448525538 25.10111149309438 23 24.770407534692605 23.490884941526815 25.687956060924282 26.050751462856297 24 24.981256049983866 24.414185562171834 25.382417646886275 25.222140740958025 25 24.969991516663363 23.938028228508003 25.72152362134046 25.370456633488175 26 25.04517570415429 24.70313108698611 25.791102850410923 24.460590358448677 27 25.49514970952234 24.37243096535272 24.979788011738794 25.15263131338614 28 24.883600863606496 24.072092368346944 25.96850652398385 25.075800244062705 29 24.854356628841437 24.313202769600107 25.627718529591565 25.204722071966895 30 24.822964665683365 24.63475278416298 25.60831511644143 24.93396743371222 31 25.16061276336093 24.44787345767744 24.937074999559965 25.454438779401674 32 24.985655466000814 24.577437602743824 24.668961009855195 25.767945921400166 33 24.823876730138316 24.180633715227096 25.19231581565843 25.80317373897616 34 25.466503176903355 24.126043567284057 25.425904522760472 24.981548733052115 35 26.00187738339689 24.128131416837782 25.34115576415371 24.528835435611615 36 25.03740297228953 24.917596118304868 24.8252474463304 25.2197534630752 37 25.885053101426013 24.610055653532996 24.773038485773323 24.73185275926767 38 25.0422434065083 24.56653571210649 25.182585390352546 25.208635491032666 39 25.426934729500445 24.520497795216826 24.69673964315133 25.3558278321314 40 25.62475506128455 24.777589779572757 24.967673956355735 24.62998120278696 41 24.639954755272488 25.185801416009777 25.317452308818734 24.856791519898998 42 25.918646796337736 25.292311374828547 24.575627831445605 24.213413997388116 43 25.07606255844761 24.358557668502183 25.059518291974626 25.505861481075588 44 24.936345865473296 24.975418357265724 24.540340881090554 25.547894896170426 45 25.044734053849826 25.229889036079406 24.583489291400852 25.141887618669912 46 24.804257810620825 24.99433864190766 24.567243440744647 25.634160106726867 47 25.059284178017975 24.94100916279359 24.918832597439017 25.080874061749412 48 25.82263628470185 25.334639663952313 24.04242836693028 24.800295684415556 49 25.053973126076528 25.438707648695964 24.295298706052968 25.212020519174537 50 25.18438992338109 25.535921714949488 24.102925129360415 25.176763232309007 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 92.0 1 70.0 2 48.0 3 132.0 4 216.0 5 250.0 6 284.0 7 269.0 8 254.0 9 314.5 10 375.0 11 589.0 12 803.0 13 1395.5 14 1988.0 15 2536.5 16 3085.0 17 3417.5 18 3750.0 19 3736.5 20 3723.0 21 3943.5 22 4164.0 23 4514.5 24 4865.0 25 4942.0 26 5019.0 27 5834.0 28 6649.0 29 7617.5 30 8586.0 31 9760.0 32 10934.0 33 12691.0 34 14448.0 35 16687.0 36 18926.0 37 22903.5 38 26881.0 39 30040.5 40 33200.0 41 37170.5 42 41141.0 43 42801.5 44 44462.0 45 49580.0 46 54698.0 47 58072.5 48 61447.0 49 64254.5 50 67062.0 51 65972.5 52 64883.0 53 64886.5 54 64890.0 55 64994.5 56 65099.0 57 63068.5 58 61038.0 59 55978.5 60 50919.0 61 44977.0 62 39035.0 63 33767.5 64 28500.0 65 24164.5 66 19829.0 67 16801.5 68 13774.0 69 12157.5 70 10541.0 71 8251.5 72 5962.0 73 5004.5 74 4047.0 75 3172.5 76 2298.0 77 2013.0 78 1728.0 79 1388.0 80 1048.0 81 884.0 82 720.0 83 592.5 84 465.0 85 326.0 86 187.0 87 130.5 88 74.0 89 62.0 90 50.0 91 40.0 92 30.0 93 21.5 94 13.0 95 16.5 96 20.0 97 19.0 98 18.0 99 13.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009973283333939553 2 1.173327451051712E-4 3 7.039964706310272E-4 4 0.0 5 0.0 6 2.346654902103424E-4 7 1.173327451051712E-4 8 0.0 9 9.386619608413696E-4 10 4.693309804206848E-4 11 0.0 12 0.0 13 7.039964706310272E-4 14 2.346654902103424E-4 15 0.004223978823786163 16 8.213292157361984E-4 17 0.0 18 2.346654902103424E-4 19 1.173327451051712E-4 20 8.213292157361984E-4 21 0.0 22 0.0 23 7.039964706310272E-4 24 2.346654902103424E-4 25 0.0021119894118930816 26 0.005749304510153389 27 0.0070399647063102725 28 0.004341311568891335 29 0.002815985882524109 30 0.005397306274837875 31 0.008447957647572326 32 0.004223978823786163 33 0.00387198058847065 34 0.0037546478433654784 35 0.0031679841178396226 36 0.008447957647572326 37 0.004693309804206848 38 0.008565290392677498 39 0.004575977059101677 40 0.0026986531374189374 41 0.0026986531374189374 42 0.0021119894118930816 43 0.0021119894118930816 44 0.0017599911765775681 45 0.0021119894118930816 46 9.386619608413696E-4 47 0.0030506513727344515 48 0.0019946566667879105 49 1.173327451051712E-4 50 8.213292157361984E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 852277.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.27949324375357 #Duplication Level Percentage of deduplicated Percentage of total 1 74.89097002673701 40.65043901584423 2 14.4317443071701 15.666955352332371 3 4.800995373649163 7.817867878418457 4 2.108865406317998 4.578725822968936 5 1.0667863057154816 2.895231003680616 6 0.6758233337022882 2.2010008845398623 7 0.3915768757931878 1.4878216068818526 8 0.2615660490624876 1.135813807430609 9 0.20018096211398903 0.9779149062534921 >10 1.0126602969582414 9.808688840947964 >50 0.07941684969050308 3.0133398520867045 >100 0.07353973706477321 7.647883967536185 >500 0.005874476024782193 2.118317061078768 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 940 0.11029278039886092 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 856 0.10043682981002655 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.346654902103424E-4 2 0.0 0.0 0.0 0.0 2.346654902103424E-4 3 0.0 0.0 0.0 0.0 2.346654902103424E-4 4 0.0 0.0 0.0 0.0 2.346654902103424E-4 5 0.0 0.0 0.0 0.0 2.346654902103424E-4 6 0.0 0.0 0.0 0.0 2.346654902103424E-4 7 0.0 0.0 0.0 0.0 2.346654902103424E-4 8 0.0 0.0 0.0 0.0 3.519982353155136E-4 9 0.0 0.0 0.0 0.0 3.519982353155136E-4 10 0.0 0.0 0.0 0.0 3.519982353155136E-4 11 0.0 0.0 0.0 0.0 3.519982353155136E-4 12 0.0 0.0 0.0 0.0 7.039964706310272E-4 13 0.0 0.0 0.0 0.0 9.386619608413696E-4 14 0.0 0.0 0.0 0.0 9.386619608413696E-4 15 0.0 0.0 0.0 0.0 0.0010559947059465408 16 0.0 0.0 0.0 0.0 0.0010559947059465408 17 0.0 0.0 0.0 0.0 0.0010559947059465408 18 0.0 0.0 0.0 0.0 0.0010559947059465408 19 0.0 0.0 0.0 1.173327451051712E-4 0.0010559947059465408 20 0.0 0.0 0.0 3.519982353155136E-4 0.0010559947059465408 21 0.0 0.0 0.0 9.386619608413696E-4 0.001173327451051712 22 0.0 0.0 0.0 0.0014079929412620545 0.0014079929412620545 23 0.0 0.0 0.0 0.002698653137418938 0.0014079929412620545 24 0.0 0.0 0.0 0.004223978823786163 0.0014079929412620545 25 0.0 0.0 0.0 0.005045308039522362 0.0014079929412620545 26 0.0 0.0 0.0 0.005514639019943046 0.0014079929412620545 27 0.0 0.0 0.0 0.006570633725889587 0.0017599911765775681 28 0.0 0.0 0.0 0.008565290392677498 0.0018773239216827392 29 0.0 0.0 0.0 0.012906601961568833 0.0018773239216827392 30 0.0 0.0 0.0 0.020063899412984275 0.0018773239216827392 31 0.0 0.0 0.0 0.03602115274728756 0.0018773239216827392 32 0.0 0.0 0.0 0.0542077282385891 0.0018773239216827392 33 0.0 0.0 0.0 0.07028231431799756 0.0018773239216827392 34 0.0 0.0 0.0 0.09034621373098183 0.0021119894118930816 35 0.0 0.0 0.0 0.11322609902649021 0.0021119894118930816 36 0.0 0.0 0.0 0.14654859863635883 0.0021119894118930816 37 0.0 0.0 0.0 0.18644173197211705 0.0021119894118930816 38 0.0 0.0 0.0 0.2566067135450094 0.0021119894118930816 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 235 0.0 25.271338 10 CCGTCGT 240 0.0 24.74485 9 ACCGTAT 45 0.0013995704 24.439362 8 ACCGTCG 255 0.0 24.151836 8 TACCGTC 255 0.0 23.28927 7 GTCGTAG 265 0.0 22.410435 11 CGGACCG 60 2.872437E-4 21.999294 21 ATACCGT 270 0.0 21.995426 6 TATGCGA 50 0.0025829368 21.995424 12 CTCGACA 50 0.0025829368 21.995424 12 TCGAACG 145 1.2732926E-11 21.239454 44 TACGACG 225 0.0 20.529062 5 GTATAGG 110 1.266526E-7 19.997013 1 ATGCGAA 55 0.004487945 19.99584 13 CGACGGT 235 0.0 19.655485 7 ACGACGG 235 0.0 19.655485 6 ACGGTAT 240 0.0 19.245995 9 TAATCCC 150 4.656613E-10 19.0627 5 TATAGGA 155 7.221388E-10 18.448856 2 GCGAATC 60 0.0074192514 18.32952 15 >>END_MODULE