##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063934_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2151236 Sequences flagged as poor quality 0 Sequence length 25 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34261373461582 32.0 32.0 32.0 32.0 32.0 2 31.06701310316488 32.0 32.0 32.0 32.0 32.0 3 31.078923000544805 32.0 32.0 32.0 32.0 32.0 4 31.098997971398767 32.0 32.0 32.0 32.0 32.0 5 31.09163615707435 32.0 32.0 32.0 32.0 32.0 6 34.74171034698192 36.0 36.0 36.0 32.0 36.0 7 34.687605636945456 36.0 36.0 36.0 32.0 36.0 8 34.665924147792246 36.0 36.0 36.0 32.0 36.0 9 34.742910122366865 36.0 36.0 36.0 32.0 36.0 10 34.559467673467715 36.0 36.0 36.0 32.0 36.0 11 34.7167939733251 36.0 36.0 36.0 32.0 36.0 12 34.60369341160152 36.0 36.0 36.0 32.0 36.0 13 34.62796318023685 36.0 36.0 36.0 32.0 36.0 14 34.58521473236781 36.0 36.0 36.0 32.0 36.0 15 34.55678038113903 36.0 36.0 36.0 32.0 36.0 16 34.550799633327074 36.0 36.0 36.0 32.0 36.0 17 34.51836107242534 36.0 36.0 36.0 32.0 36.0 18 34.50284208706065 36.0 36.0 36.0 32.0 36.0 19 34.49176194522591 36.0 36.0 36.0 32.0 36.0 20 34.45770385025167 36.0 36.0 36.0 32.0 36.0 21 34.45104023919272 36.0 36.0 36.0 32.0 36.0 22 34.42986636519657 36.0 36.0 36.0 32.0 36.0 23 34.39862153664219 36.0 36.0 36.0 32.0 36.0 24 34.38133380066157 36.0 36.0 36.0 32.0 36.0 25 33.993751034289126 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 16.0 5 30.0 6 79.0 7 27.0 8 125.0 9 119.0 10 191.0 11 45.0 12 139.0 13 121.0 14 167.0 15 313.0 16 528.0 17 731.0 18 907.0 19 1118.0 20 1513.0 21 2236.0 22 3184.0 23 4892.0 24 7732.0 25 11837.0 26 17487.0 27 24006.0 28 34038.0 29 47602.0 30 63521.0 31 88471.0 32 126515.0 33 182585.0 34 421627.0 35 1109331.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.08231523574973 19.198145847129116 12.099333338293613 25.620205578827537 2 14.12984206839132 21.127542337227894 42.19125748853737 22.55135810584342 3 18.14812886527012 25.570749086094885 29.8850692262208 26.396052822414195 4 11.218222126562482 17.636716852389636 39.431920611507465 31.71314040954042 5 12.176841463221875 38.90649799119865 36.21421139786726 12.702449147712217 6 30.18883363141992 38.87628716919711 19.071745807997523 11.863133391385444 7 27.767078767139207 32.22366873259344 22.486551328128996 17.52270117213835 8 24.7137613126012 37.82428836751643 20.727717279600164 16.734233040282206 9 26.822141299141006 15.25041973034941 20.265046344741627 37.66239262576796 10 13.765554463062307 30.21958804219112 35.381060508105485 20.63379698664109 11 33.93114860996321 22.754064903576708 25.131171307099226 18.183615179360864 12 23.088920218934067 25.70042574647502 32.44673750192453 18.76391653266638 13 28.953685954611146 22.660237610259077 26.013629959303625 22.37244647582615 14 20.62795642504513 22.63031295949747 28.38730895022577 28.354421665231627 15 22.21442359124631 32.109490918393455 23.657387381101884 22.018698109258356 16 21.24230039641155 28.987955080180072 28.390221166199797 21.379523357208576 17 21.007035292749578 29.34789231932089 28.187964416535845 21.457107971393686 18 20.74172149691581 28.383778092991296 30.371018923821346 20.50348148627154 19 23.15545610599132 27.465772861123643 27.813277757360638 21.565493275524396 20 23.80383915931334 27.722971266087022 28.223929404353886 20.249260170245748 21 23.442870879549016 27.09408623784839 26.897725311486298 22.56531757111629 22 23.156293396417333 29.016685159210333 27.1330974661726 20.69392397819973 23 21.794441743451127 28.836171702533015 27.73108031720259 21.638306236813275 24 22.528202296378 27.70759025455919 28.5801413220107 21.184066127052105 25 22.013856065145465 28.33431339345196 28.177162614304162 21.474667927098416 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 52.0 2 222.5 3 393.0 4 393.0 5 393.0 6 892.0 7 1391.0 8 1391.0 9 1391.0 10 2495.5 11 3600.0 12 3600.0 13 3600.0 14 6292.5 15 8985.0 16 8985.0 17 8985.0 18 15929.5 19 22874.0 20 22874.0 21 22874.0 22 37483.5 23 52093.0 24 52093.0 25 52093.0 26 76473.0 27 100853.0 28 100853.0 29 100853.0 30 133892.5 31 166932.0 32 166932.0 33 166932.0 34 194325.0 35 221718.0 36 221718.0 37 221718.0 38 243746.0 39 265774.0 40 265774.0 41 265774.0 42 281887.5 43 298001.0 44 298001.0 45 298001.0 46 305226.5 47 312452.0 48 312452.0 49 312452.0 50 294628.5 51 276805.0 52 276805.0 53 276805.0 54 235360.0 55 193915.0 56 193915.0 57 193915.0 58 156908.5 59 119902.0 60 119902.0 61 119902.0 62 91408.5 63 62915.0 64 62915.0 65 62915.0 66 45117.5 67 27320.0 68 27320.0 69 27320.0 70 18392.5 71 9465.0 72 9465.0 73 9465.0 74 6264.0 75 3063.0 76 3063.0 77 3063.0 78 2078.0 79 1093.0 80 1093.0 81 1093.0 82 729.5 83 366.0 84 366.0 85 366.0 86 292.5 87 219.0 88 219.0 89 219.0 90 188.5 91 158.0 92 158.0 93 158.0 94 139.5 95 121.0 96 121.0 97 121.0 98 448.5 99 776.0 100 776.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03811762168353449 2 0.005345764016593252 3 0.0013015773257792265 4 0.004323096117766717 5 0.009389950707407276 6 0.013713046825173993 7 0.021661965493325698 8 0.035235557605023345 9 0.048623210098752534 10 0.05624673443545943 11 0.05508461182315655 12 0.0634518946317373 13 0.06568317004735882 14 0.06828632469891727 15 0.05977958717686019 16 0.06740311151356708 17 0.06326595501376883 18 0.08009349043991454 19 0.07558445470417936 20 0.08158100738366222 21 0.07544499999070302 22 0.08000052063093031 23 0.08464901108014183 24 0.07795518483327724 25 0.07939621687253282 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2151236.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.93942713205365 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07265073263972 57.512473990505306 2 13.39824774844988 19.00928039696724 3 3.295672764746249 7.013794138374309 4 1.085168880378485 3.0792503486232707 5 0.4244650615419975 1.5055654151680598 6 0.2049745539965396 0.8724466462297631 7 0.10257457490650364 0.5093607107526906 8 0.06874535847871799 0.39014050787743365 9 0.04931809278134991 0.3148737524238989 >10 0.2555583688705345 3.3547617161285044 >50 0.02273104028360204 1.118054538963632 >100 0.01600916578692757 2.328907134104195 >500 0.0030279360749307987 1.5601954975895524 >1k 8.557210646542788E-4 1.4308952062921547 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 4498 0.2090891004055343 No Hit CTGTAGGACGTGGAATATGGCAAGA 4283 0.1990948459397295 No Hit GTCCTACAGTGGACATTTCTAAATT 3913 0.1818954312776469 No Hit CTTTAGGACGTGAAATATGGCGAGG 3529 0.16404522795267465 No Hit GTCCTACAGTGTGCATTTCTCATTT 2588 0.12030293282559422 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 4.648490449211523E-5 0.0 6 0.0 0.0 0.0 4.648490449211523E-5 0.0 7 0.0 0.0 0.0 4.648490449211523E-5 0.0 8 0.0 0.0 0.0 4.648490449211523E-5 0.0 9 0.0 0.0 0.0 9.296980898423046E-5 0.0 10 0.0 0.0 0.0 1.394547134763457E-4 0.0 11 0.0 0.0 0.0 1.394547134763457E-4 0.0 12 0.0 0.0 0.0 1.394547134763457E-4 0.0 13 0.0 0.0 0.0 1.394547134763457E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCCAA 35 0.0021699958 16.286352 10 GGTATCA 930 0.0 15.829534 1 CCGGTTT 90 2.2882887E-9 14.778701 12 TCCAACG 155 0.0 13.486909 18 GCCGGTT 100 1.0073563E-8 13.300521 11 CCAACGA 110 2.737579E-9 12.958068 19 GTATCAA 2860 0.0 12.752185 1 TAGGACC 915 0.0 12.664512 4 CCAACGT 55 0.003062861 12.094196 19 TATACGT 55 0.0030730178 12.088852 4 GACGTGG 980 0.0 11.923659 7 GTCGAGG 80 2.8595912E-5 11.878228 19 GTCCTAA 1475 0.0 11.783612 1 AGGACCT 1620 0.0 11.258128 5 GGCGAGG 940 0.0 11.120045 19 TGGCGAG 2155 0.0 11.067458 18 GGACGAG 70 0.0014924757 10.856558 6 TGTAGGA 2445 0.0 10.835874 2 GGACGTG 1995 0.0 10.808942 6 AGGACGT 2040 0.0 10.756272 5 >>END_MODULE