##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063934_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2151236 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.372481215450094 32.0 32.0 32.0 32.0 32.0 2 31.43041860586193 32.0 32.0 32.0 32.0 32.0 3 31.507893601631807 32.0 32.0 32.0 32.0 32.0 4 31.576564821339918 32.0 32.0 32.0 32.0 32.0 5 31.5553779315705 32.0 32.0 32.0 32.0 32.0 6 35.1416739028168 36.0 36.0 36.0 36.0 36.0 7 35.16316480386159 36.0 36.0 36.0 36.0 36.0 8 35.10462496908754 36.0 36.0 36.0 36.0 36.0 9 35.21028655154525 36.0 36.0 36.0 36.0 36.0 10 35.08992272349477 36.0 36.0 36.0 36.0 36.0 11 35.21199208269107 36.0 36.0 36.0 36.0 36.0 12 35.14322975257015 36.0 36.0 36.0 36.0 36.0 13 35.17665518799425 36.0 36.0 36.0 36.0 36.0 14 35.12982490066176 36.0 36.0 36.0 36.0 36.0 15 35.11130577956114 36.0 36.0 36.0 36.0 36.0 16 35.13133984369916 36.0 36.0 36.0 36.0 36.0 17 35.116032364649904 36.0 36.0 36.0 36.0 36.0 18 35.108439985199205 36.0 36.0 36.0 36.0 36.0 19 35.09556645574916 36.0 36.0 36.0 36.0 36.0 20 35.08967077531243 36.0 36.0 36.0 36.0 36.0 21 35.08714153165901 36.0 36.0 36.0 36.0 36.0 22 35.06301958501996 36.0 36.0 36.0 36.0 36.0 23 35.02576332861666 36.0 36.0 36.0 36.0 36.0 24 35.01671132316491 36.0 36.0 36.0 36.0 36.0 25 34.988739961584876 36.0 36.0 36.0 36.0 36.0 26 34.9455782629149 36.0 36.0 36.0 36.0 36.0 27 34.917615268617666 36.0 36.0 36.0 36.0 36.0 28 34.89171573923084 36.0 36.0 36.0 36.0 36.0 29 34.87737840013834 36.0 36.0 36.0 36.0 36.0 30 34.86025010738013 36.0 36.0 36.0 36.0 36.0 31 34.84553159207079 36.0 36.0 36.0 32.0 36.0 32 34.818444838223236 36.0 36.0 36.0 32.0 36.0 33 34.82360233837664 36.0 36.0 36.0 32.0 36.0 34 34.816605430552485 36.0 36.0 36.0 32.0 36.0 35 34.789629775626665 36.0 36.0 36.0 32.0 36.0 36 34.761362770054056 36.0 36.0 36.0 32.0 36.0 37 34.733081819010096 36.0 36.0 36.0 32.0 36.0 38 34.71107400582735 36.0 36.0 36.0 32.0 36.0 39 34.670011565444234 36.0 36.0 36.0 32.0 36.0 40 34.68724863287896 36.0 36.0 36.0 32.0 36.0 41 34.66805734005939 36.0 36.0 36.0 32.0 36.0 42 34.647481261935 36.0 36.0 36.0 32.0 36.0 43 34.63886342549121 36.0 36.0 36.0 32.0 36.0 44 34.59698703443044 36.0 36.0 36.0 32.0 36.0 45 34.571054035912375 36.0 36.0 36.0 32.0 36.0 46 34.5334254354241 36.0 36.0 36.0 32.0 36.0 47 34.523069528401344 36.0 36.0 36.0 32.0 36.0 48 34.495593695903196 36.0 36.0 36.0 32.0 36.0 49 34.46747869596827 36.0 36.0 36.0 32.0 36.0 50 33.94841849057937 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 1.0 19 2.0 20 13.0 21 43.0 22 155.0 23 489.0 24 1271.0 25 2930.0 26 6379.0 27 11876.0 28 20838.0 29 32528.0 30 48213.0 31 70124.0 32 101527.0 33 162783.0 34 343990.0 35 1348071.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.363254099492394 20.056446615364802 12.51025657594701 26.070042709195796 2 13.638354050259851 21.95893492994673 41.42323890629503 22.979472113498385 3 17.53059182941092 26.258072133683648 30.12023830110058 26.09109773580485 4 10.969972611094274 18.372089347705227 39.35486390149663 31.303074139703874 5 11.85862453027004 39.5371776969147 35.79063384956369 12.813563923251564 6 30.296471699498984 39.25663131021544 18.751748996157556 11.695147994128021 7 27.784551664508996 32.30088762966389 22.43520582363154 17.479354882195576 8 24.852270973524057 38.02632533111198 20.42718697530164 16.69421672006233 9 26.765628348417142 15.142225071274073 20.152491419917133 37.93965516039165 10 13.716931401397353 30.525704138601068 35.18336192189512 20.574002538106463 11 34.033815010361494 22.770000846026047 25.02744936162221 18.168734781990246 12 23.171269685803445 25.798553666664652 32.21282864292245 18.81734800460945 13 28.96097388187015 22.619938583858694 25.992015715689565 22.427071818581588 14 20.64298099226954 22.719885832756145 28.332814250452067 28.30431892452225 15 22.172708631526685 32.26429224567894 23.608778378438686 21.95422074435569 16 21.47724821682249 29.003642590981098 28.13334411793144 21.385765074264974 17 21.061287557478582 29.516426835549424 27.984656262725245 21.43762934424675 18 20.890261952220868 28.49994793681016 30.14714359027757 20.4626465206914 19 23.310506146234072 27.464955030503397 27.788582935577498 21.435955887685033 20 23.966400461133684 27.799760136108816 28.012895008413828 20.22094439434367 21 23.571286460434838 27.063929759449916 26.857955147645352 22.50682863246989 22 23.328413678654357 28.971358312783124 27.094808331028457 20.60541967753407 23 21.929219435369458 28.858476059077393 27.614293709778487 21.598010795774663 24 22.714954170319622 27.757241684509204 28.35513330538028 21.172670839790893 25 22.181325265920606 28.21617269568791 28.062677400490703 21.539824637900786 26 21.03075798794672 29.007919610100057 28.523380422069287 21.437941979883927 27 21.828231668057434 28.757539764631503 27.718534048937865 21.6956945183732 28 21.115917337046085 28.99623223910987 27.492242503410974 22.395607920433072 29 22.129570446056476 28.26567682463386 27.19840460025521 22.40634812905445 30 21.573390034418573 28.32145759226168 28.014182089324663 22.090970283995084 31 22.72477927448807 27.581995715656447 27.780360450153594 21.91286455970188 32 21.656614716352774 28.784171130154085 27.91157134901295 21.647642804480192 33 21.352024154578142 28.72879327056056 28.561161613931183 21.35802096093011 34 21.684939626018338 28.768928608783572 28.59534905342429 20.9507827117738 35 21.59162064177472 28.86322042068789 28.211302483136087 21.333856454401307 36 21.1379007049469 28.511020490134275 28.884134696738943 21.466944108179874 37 21.54093890345203 28.288804831233623 27.41509383967508 22.75516242563927 38 21.574960844940385 29.123275329453392 27.662509187318086 21.63925463828814 39 22.509977291057975 27.79393204052744 27.92623429027002 21.76985637814456 40 22.813176514777165 27.654634107338676 28.34290400062105 21.189285377263108 41 22.68564617634562 27.26717002252736 28.58320293869081 21.46398086243621 42 21.744969500431857 28.613113373230853 28.461150123327776 21.180767003009514 43 21.29156120202957 28.478636292851185 28.642870590532237 21.58693191458701 44 20.931169835738803 28.54981945028096 28.4548030687874 22.06420764519284 45 21.32835877094344 28.553405500436728 28.07646483771234 22.041770890907493 46 21.430610136936124 27.557871758470302 28.43588434852377 22.575633756069806 47 22.345652727702088 27.593357716759296 28.136360002008193 21.924629553530423 48 21.026009814112015 28.090989722888004 28.317794632547226 22.565205830452754 49 21.97989057422963 27.630983204957165 28.099877744360203 22.289248476453004 50 21.13932212072374 28.85874873152725 27.93145621834048 22.07047292940853 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 2.0 2 4.0 3 14.0 4 24.0 5 36.0 6 48.0 7 69.0 8 90.0 9 137.0 10 184.0 11 315.5 12 447.0 13 782.0 14 1117.0 15 1556.5 16 1996.0 17 2574.0 18 3152.0 19 3974.5 20 4797.0 21 6449.0 22 8101.0 23 10740.5 24 13380.0 25 17747.0 26 22114.0 27 29028.0 28 35942.0 29 45740.0 30 55538.0 31 67646.0 32 79754.0 33 95880.5 34 112007.0 35 129287.5 36 146568.0 37 153720.5 38 160873.0 39 161889.0 40 162905.0 41 164419.0 42 165933.0 43 167355.5 44 168778.0 45 170488.0 46 172198.0 47 170978.0 48 169758.0 49 165376.0 50 160994.0 51 151208.5 52 141423.0 53 129195.0 54 116967.0 55 103293.5 56 89620.0 57 76592.5 58 63565.0 59 52531.5 60 41498.0 61 33048.0 62 24598.0 63 18957.5 64 13317.0 65 10024.0 66 6731.0 67 5015.0 68 3299.0 69 2451.5 70 1604.0 71 1200.5 72 797.0 73 602.0 74 407.0 75 321.0 76 235.0 77 203.5 78 172.0 79 144.0 80 116.0 81 85.0 82 54.0 83 55.5 84 57.0 85 40.5 86 24.0 87 20.5 88 17.0 89 14.0 90 11.0 91 10.5 92 10.0 93 7.5 94 5.0 95 4.5 96 4.0 97 2.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008227828095104394 2 7.437584718738437E-4 3 3.7187923593692184E-4 4 0.0 5 0.0 6 9.296980898423046E-5 7 4.648490449211523E-5 8 0.0 9 0.0015340018482398025 10 0.001208607516794996 11 9.296980898423046E-5 12 1.394547134763457E-4 13 4.648490449211523E-4 14 2.789094269526914E-4 15 0.004044186690814025 16 9.296980898423046E-4 17 0.0 18 1.8593961796846092E-4 19 0.0 20 7.437584718738437E-4 21 0.0 22 4.648490449211523E-5 23 0.0011156377078107656 24 4.648490449211523E-4 25 0.001394547134763457 26 0.005578188539053828 27 0.006554371533388248 28 0.004230126308782486 29 0.0023707301290978766 30 0.0033469131234322965 31 0.006879765864833054 32 0.003625822550384988 33 0.004230126308782486 34 0.002835579174019029 35 0.002091820702145185 36 0.007065705482801514 37 0.0031144886009717206 38 0.008041888477135935 39 0.004694975353703638 40 0.002091820702145185 41 0.003439882932416527 42 0.0026961244605426832 43 0.0019058810841767243 44 0.0013015773257792265 45 0.0011621226123028807 46 6.507886628896132E-4 47 0.002231275415621531 48 0.002231275415621531 49 2.789094269526914E-4 50 0.0012550924212871113 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2151236.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 76.84506164399193 #Duplication Level Percentage of deduplicated Percentage of total 1 82.12511508661945 63.10909531351202 2 13.030409435265167 20.026452325988114 3 3.0793772999819833 7.0990481532667475 4 0.9334725587343914 2.8693102527567667 5 0.35068934635306687 1.3474372219196329 6 0.1524612759156252 0.7029537687634727 7 0.07816793698648272 0.42047739554169583 8 0.049082875537083424 0.3017421277049247 9 0.035215034927583905 0.2435491376824962 >10 0.15117016957552815 2.0234302726202325 >50 0.008806898555443999 0.46495767664271404 >100 0.005423599885636164 0.8596648801025045 >500 3.0424083120466136E-4 0.15463138750431943 >1k 3.0424083120414496E-4 0.37725008599430604 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2375 0.11040164816877368 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 4.648490449211523E-5 0.0 6 0.0 0.0 0.0 4.648490449211523E-5 0.0 7 0.0 0.0 0.0 4.648490449211523E-5 0.0 8 0.0 0.0 0.0 4.648490449211523E-5 0.0 9 0.0 0.0 0.0 4.648490449211523E-5 0.0 10 0.0 0.0 0.0 4.648490449211523E-5 0.0 11 0.0 0.0 0.0 4.648490449211523E-5 0.0 12 0.0 0.0 0.0 4.648490449211523E-5 0.0 13 0.0 0.0 0.0 4.648490449211523E-5 0.0 14 0.0 0.0 0.0 4.648490449211523E-5 0.0 15 0.0 0.0 0.0 4.648490449211523E-5 0.0 16 0.0 0.0 0.0 4.648490449211523E-5 0.0 17 0.0 0.0 0.0 4.648490449211523E-5 0.0 18 0.0 0.0 0.0 4.648490449211523E-5 0.0 19 0.0 0.0 0.0 4.648490449211523E-5 0.0 20 0.0 0.0 0.0 9.296980898423046E-5 0.0 21 0.0 0.0 0.0 1.394547134763457E-4 0.0 22 0.0 0.0 0.0 1.8593961796846092E-4 0.0 23 0.0 0.0 0.0 2.3242452246057614E-4 0.0 24 0.0 0.0 0.0 3.253943314448066E-4 0.0 25 0.0 0.0 0.0 4.1836414042903706E-4 0.0 26 0.0 0.0 0.0 6.507886628896132E-4 0.0 27 0.0 0.0 0.0 9.296980898423046E-4 0.0 28 0.0 0.0 0.0 0.0025101848425742226 0.0 29 0.0 0.0 0.0 0.005206309303116906 0.0 30 0.0 0.0 0.0 0.011388801600568231 0.0 31 0.0 0.0 0.0 0.033887495374752004 0.0 32 0.0 0.0 0.0 0.06247571163740287 0.0 33 0.0 0.0 0.0 0.09324871841118315 0.0 34 0.0 0.0 0.0 0.13108743066776496 0.0 35 0.0 0.0 0.0 0.17194766171633424 0.0 36 0.0 0.0 0.0 0.23079755080335213 0.0 37 0.0 0.0 0.0 0.3205134164731345 0.0 38 0.0 0.0 0.0 0.4429081700008739 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCCG 30 0.00574794 29.331303 5 GGTATCA 1135 0.0 29.072203 1 GTATCAA 2985 0.0 27.26716 1 TGCGGCG 50 0.0025793365 22.00257 25 TAGGACC 1105 0.0 20.90353 4 GTCCTAC 2490 0.0 20.496098 1 TTACGCG 55 0.0044859205 19.999083 10 TAATACG 55 0.004486524 19.998617 4 TATCAAC 4165 0.0 19.17185 2 ATCAACG 4140 0.0 19.129112 3 TAGGACG 3100 0.0 19.089 4 AGGACGT 3065 0.0 19.019892 5 GTACCGT 105 1.7952007E-6 18.855839 6 ATACCGT 105 1.7952007E-6 18.855839 6 TCAACGC 4190 0.0 18.848337 4 GACGTGA 1650 0.0 18.665808 7 GTAGGAC 3010 0.0 18.5635 3 GGACGTG 3005 0.0 18.521181 6 TTAGGAC 1995 0.0 18.414766 3 CAACGCA 4305 0.0 18.395939 5 >>END_MODULE