SRR4063933_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4063933_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1204514
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	4381	0.36371515814677124	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	3345	0.27770536498538	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3339	0.27720723877015957	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	2136	0.17733293261846686	No Hit
GTACATGGAAGCAGTGGTATCAACG	2123	0.17625365915215596	No Hit
TCCATGTACTCTGCGTTGATACCAC	1834	0.1522605797857061	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1698	0.14096971890737675	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1551	0.12876562663447663	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	1430	0.11872008129419832	No Hit
GTACATGGGGTGGTATCAACGCAAA	1354	0.1124104825680731	No Hit
CTATTGGAGCTGGAATTACCGCGGC	1328	0.11025193563545131	No Hit
GTCCTATTCCATTATTCCTAGCTGC	1277	0.1060178628060778	No Hit
GTATCTGATCGTCTTCGAACCTCCG	1277	0.1060178628060778	No Hit
GAATAGGACCGCGGTTCTATTTTGT	1265	0.10502161037563697	No Hit
GATTAAGAGGGACGGCCGGGGGCAT	1261	0.1046895262321567	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGTAT	55	1.1282607E-5	15.54491	7
ACGCGTA	55	1.1291497E-5	15.543619	6
TACGCGT	55	1.1295942E-5	15.542973	5
ATACGCG	55	1.1304841E-5	15.541681	4
CTATTAC	40	0.0052925223	14.244176	1
GCGCCGA	175	0.0	13.574902	19
CGCATCG	190	0.0	13.502333	13
CCGTCGT	185	0.0	13.35255	9
CGTCGTA	185	0.0	13.35255	10
CGTCTTA	100	1.002627E-8	13.303403	15
TTATACG	80	2.0112748E-6	13.054993	2
CGTATGC	60	4.0877398E-4	12.667803	9
ATAATAC	60	4.106405E-4	12.660964	3
ATACCGT	205	0.0	12.510718	6
CGTTATT	100	1.4521902E-7	12.342901	2
ATCCCCG	235	0.0	12.1292515	12
GTATTAC	55	0.003077163	12.085967	1
GAGTTAG	55	0.003077163	12.085967	1
GTTAGAC	55	0.00307812	12.0854645	3
GCATCGC	215	0.0	11.93279	14