##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063933_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1204514 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.174346665958222 32.0 32.0 32.0 32.0 32.0 2 31.24035337073708 32.0 32.0 32.0 32.0 32.0 3 31.372688901913968 32.0 32.0 32.0 32.0 32.0 4 31.492122964116646 32.0 32.0 32.0 32.0 32.0 5 31.396943497543408 32.0 32.0 32.0 32.0 32.0 6 34.98198609563691 36.0 36.0 36.0 36.0 36.0 7 35.011318257820164 36.0 36.0 36.0 36.0 36.0 8 34.94997733525721 36.0 36.0 36.0 36.0 36.0 9 35.094907987785945 36.0 36.0 36.0 36.0 36.0 10 34.904011078327024 36.0 36.0 36.0 32.0 36.0 11 35.09799637032031 36.0 36.0 36.0 36.0 36.0 12 34.98139830670295 36.0 36.0 36.0 36.0 36.0 13 35.04105805328954 36.0 36.0 36.0 36.0 36.0 14 34.97838464310087 36.0 36.0 36.0 36.0 36.0 15 34.93452546006107 36.0 36.0 36.0 36.0 36.0 16 34.943774003456994 36.0 36.0 36.0 36.0 36.0 17 34.90012071258616 36.0 36.0 36.0 32.0 36.0 18 34.90090111032333 36.0 36.0 36.0 32.0 36.0 19 34.90789895343682 36.0 36.0 36.0 32.0 36.0 20 34.88224711377369 36.0 36.0 36.0 32.0 36.0 21 34.87213017034256 36.0 36.0 36.0 32.0 36.0 22 34.847516923838164 36.0 36.0 36.0 32.0 36.0 23 34.78855538416324 36.0 36.0 36.0 32.0 36.0 24 34.7594440579354 36.0 36.0 36.0 32.0 36.0 25 34.72378403239813 36.0 36.0 36.0 32.0 36.0 26 34.66449954089367 36.0 36.0 36.0 32.0 36.0 27 34.653436987863984 36.0 36.0 36.0 32.0 36.0 28 34.62291015297456 36.0 36.0 36.0 32.0 36.0 29 34.57930003304237 36.0 36.0 36.0 32.0 36.0 30 34.55790883294009 36.0 36.0 36.0 32.0 36.0 31 34.543930581130645 36.0 36.0 36.0 32.0 36.0 32 34.49309431023633 36.0 36.0 36.0 32.0 36.0 33 34.45707646403446 36.0 36.0 36.0 32.0 36.0 34 34.440558598737745 36.0 36.0 36.0 32.0 36.0 35 34.381748157348106 36.0 36.0 36.0 32.0 36.0 36 34.349495315122944 36.0 36.0 36.0 32.0 36.0 37 34.332804766071625 36.0 36.0 36.0 32.0 36.0 38 34.261861630499936 36.0 36.0 36.0 32.0 36.0 39 34.25576373541528 36.0 36.0 36.0 32.0 36.0 40 34.20833381762271 36.0 36.0 36.0 32.0 36.0 41 34.19438877422761 36.0 36.0 36.0 32.0 36.0 42 34.10088965342038 36.0 36.0 36.0 32.0 36.0 43 34.097694173749744 36.0 36.0 36.0 32.0 36.0 44 34.015480102348334 36.0 36.0 36.0 32.0 36.0 45 33.948702132146245 36.0 36.0 36.0 32.0 36.0 46 33.93888821549604 36.0 36.0 36.0 32.0 36.0 47 33.88098602423882 36.0 36.0 36.0 32.0 36.0 48 33.837437339873176 36.0 36.0 36.0 32.0 36.0 49 33.81710714860932 36.0 36.0 36.0 32.0 36.0 50 33.14409380048717 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 5.0 19 3.0 20 13.0 21 37.0 22 130.0 23 438.0 24 1097.0 25 2588.0 26 5308.0 27 9695.0 28 16018.0 29 24609.0 30 35290.0 31 51004.0 32 75092.0 33 119282.0 34 239438.0 35 624466.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.705632392525565 18.378547125352657 11.890145181190045 26.025675300931727 2 15.416310366871175 21.075042963528738 37.577023021809694 25.931623647790385 3 17.939538749048367 25.575110812971612 29.130673379233162 27.35467705874686 4 11.671761390901226 16.47876238881408 36.7540767479664 35.09539947231829 5 13.569456228819258 37.8627396609753 33.524641473656594 15.043162636548848 6 33.226374476655714 36.635054997330876 17.162786952071084 12.975783573942332 7 29.27090684178629 31.145694099675385 21.325020132668058 18.25837892587027 8 27.96364342797178 33.244694540702724 19.64551678104198 19.146145250283517 9 27.60261087154691 13.748088421604946 18.42114002301366 40.22816068383448 10 15.361190466109258 27.159168553336936 32.17493024093755 25.304710739616255 11 37.145634791820434 21.02193998736419 22.899545293409037 18.932879927406347 12 24.585724343136473 23.97942071145825 29.514110278685475 21.9207446667198 13 29.712371472098496 19.624576070668034 25.668718685269056 24.994333771964417 14 23.329613984750672 20.190417364044528 25.694887224037615 30.78508142716718 15 25.032545813213602 27.64658899951513 23.023589072577163 24.297276114694103 16 25.201680023445277 25.857300953834223 24.71915895881053 24.221860063909965 17 23.45917108476946 25.98151619657389 25.983010575219552 24.576302143437104 18 24.383006879970377 24.92853946539301 27.275799058705154 23.41265459593146 19 25.217079433762855 25.387189677487914 25.784943790560998 23.61078709818823 20 25.544933395876313 24.475614464032944 25.774986405203798 24.204465734886945 21 26.721565710319684 24.383942403326156 24.61498994615256 24.27950194020161 22 25.294455103431844 24.886904499992944 25.305662952579176 24.51297744399604 23 23.921860017185484 24.57914246931312 25.854106043561465 25.644891469939935 24 24.30959362660937 25.67006611828232 25.590863655534047 24.429476599574265 25 24.804086719076253 24.66327988595975 25.895920836007363 24.636712558956635 26 23.953428708778322 25.695991391800128 26.44970704057428 23.900872858847276 27 24.864147243216493 25.204640539209866 25.52470921905733 24.40650299851631 28 23.75495659451238 25.31698957869777 26.24653785609437 24.681515970695482 29 23.94607784125392 25.16627548720316 26.1131594874788 24.77448718406412 30 24.124417994513706 25.45672071042861 26.348243522386873 24.070617772670815 31 24.481943796361026 25.270714360439918 25.396253422849107 24.85108842034995 32 24.032352872803596 25.612552595834842 25.265013267268206 25.09008126409336 33 23.803166427138052 25.02596623020153 26.067106203749596 25.103761138910823 34 24.374951223197666 25.372156623765218 26.252214674386824 24.00067747865029 35 25.196001185596494 25.239838366998573 25.917322079576106 23.646838367828824 36 24.087607604017215 25.90857311759392 25.533287501992668 24.470531776396196 37 24.96193295883446 25.743780999523437 25.247871649726765 24.04641439191534 38 24.246067495028583 25.617223728292863 25.6029425806532 24.533766196025358 39 24.600457805737268 25.189693808164947 25.38704677107471 24.822801615023067 40 25.177006432672798 25.75410385927158 25.56647039874601 23.50241930930961 41 23.834830546468957 25.726051508559856 26.462564136625545 23.97655380834565 42 25.46119487247609 26.340744553666312 25.177337938363443 23.020722635494156 43 24.272307329563002 25.339147125925287 25.719473437764634 24.669072106747077 44 23.992375202471415 25.873667798264993 25.327794064048632 24.80616293521496 45 24.220627084900382 26.19772286121807 25.25342591992986 24.328224133951686 46 23.94437175382899 25.662268699937567 25.435285795884756 24.958073750348696 47 24.59976736984293 25.448095330211117 25.714349760520456 24.237787539425497 48 25.055293387043747 26.312346199700453 24.518050883199777 24.114309530056026 49 24.081347669465316 26.215329233737567 25.306992309729527 24.396330787067594 50 24.177996440004783 26.7125835204102 24.504606075902284 24.604813963682734 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 62.0 1 48.0 2 34.0 3 129.5 4 225.0 5 269.5 6 314.0 7 304.0 8 294.0 9 407.5 10 521.0 11 750.5 12 980.0 13 1678.5 14 2377.0 15 3196.5 16 4016.0 17 4541.5 18 5067.0 19 5288.5 20 5510.0 21 6229.0 22 6948.0 23 7721.5 24 8495.0 25 9109.0 26 9723.0 27 12407.5 28 15092.0 29 17171.5 30 19251.0 31 21127.5 32 23004.0 33 26816.0 34 30628.0 35 35327.5 36 40027.0 37 45542.5 38 51058.0 39 53493.5 40 55929.0 41 59795.5 42 63662.0 43 64020.0 44 64378.0 45 71410.0 46 78442.0 47 83466.5 48 88491.0 49 89412.0 50 90333.0 51 85737.0 52 81141.0 53 79248.5 54 77356.0 55 78447.5 56 79539.0 57 76959.5 58 74380.0 59 67742.5 60 61105.0 61 54189.0 62 47273.0 63 41215.0 64 35157.0 65 30046.0 66 24935.0 67 21746.5 68 18558.0 69 16787.0 70 15016.0 71 11758.0 72 8500.0 73 7351.5 74 6203.0 75 4837.5 76 3472.0 77 3068.5 78 2665.0 79 2192.5 80 1720.0 81 1426.0 82 1132.0 83 929.0 84 726.0 85 549.0 86 372.0 87 266.5 88 161.0 89 120.5 90 80.0 91 73.0 92 66.0 93 52.0 94 38.0 95 32.5 96 27.0 97 22.5 98 18.0 99 15.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007305851156566051 2 3.3208414348027504E-4 3 5.811472510904813E-4 4 0.0 5 0.0 6 8.302103587006876E-5 7 3.3208414348027504E-4 8 0.0 9 9.962524304408251E-4 10 9.132313945707564E-4 11 8.302103587006876E-5 12 1.6604207174013752E-4 13 7.471893228306188E-4 14 1.6604207174013752E-4 15 0.004815220080463988 16 5.811472510904813E-4 17 0.0 18 2.490631076102063E-4 19 8.302103587006876E-5 20 7.471893228306188E-4 21 0.0 22 8.302103587006876E-5 23 7.471893228306188E-4 24 4.981262152204126E-4 25 0.0022415679684918565 26 0.006724703905475569 27 0.007056788048955844 28 0.004815220080463988 29 0.0030717783271925437 30 0.004815220080463988 31 0.008966271873967426 32 0.003818967650023163 33 0.00539636733155447 34 0.0039850097217633005 35 0.004732199044593919 36 0.008136061515266737 37 0.004981262152204125 38 0.01070971362723887 39 0.006060535618515019 40 0.003154799363062613 41 0.004483135936983713 42 0.0028227152195823375 43 0.0018264627891415128 44 0.0019094838250115814 45 0.0016604207174013752 46 0.0014943786456612376 47 0.0022415679684918565 48 0.0024906310761020627 49 4.151051793503438E-4 50 0.0014943786456612376 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1204514.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.39871572025559 #Duplication Level Percentage of deduplicated Percentage of total 1 75.99711313371034 40.581482397871014 2 14.132657239554817 15.093314926135992 3 4.626874958544225 7.412075417534174 4 1.9435320661954687 4.151284651838911 5 1.0038164818801938 2.680125547561378 6 0.5667848032814723 1.8159348350992994 7 0.34413749867331844 1.2863550322235457 8 0.23380651129675767 0.9987973944224231 9 0.1616381561267221 0.776814295370141 >10 0.8030888600127137 7.895804820287032 >50 0.08814103612788235 3.2776077141280378 >100 0.08730106061724167 9.51400753240032 >500 0.009230752742984846 3.316033437127093 >1k 0.0018774412358613245 1.2003619980006568 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1359 0.11282558774742345 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1339 0.11116516703002206 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1335 0.1108330828865418 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1294 0.10742922041586897 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1292 0.10726317834412882 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.490631076102063E-4 7 0.0 0.0 0.0 0.0 2.490631076102063E-4 8 0.0 0.0 0.0 0.0 2.490631076102063E-4 9 0.0 0.0 0.0 2.490631076102063E-4 2.490631076102063E-4 10 0.0 0.0 0.0 2.490631076102063E-4 2.490631076102063E-4 11 0.0 0.0 0.0 2.490631076102063E-4 2.490631076102063E-4 12 0.0 0.0 0.0 2.490631076102063E-4 9.132313945707563E-4 13 0.0 0.0 0.0 2.490631076102063E-4 9.962524304408251E-4 14 0.0 0.0 0.0 2.490631076102063E-4 9.962524304408251E-4 15 0.0 0.0 0.0 2.490631076102063E-4 0.001079273466310894 16 0.0 0.0 0.0 5.811472510904813E-4 0.0011622945021809625 17 0.0 0.0 0.0 5.811472510904813E-4 0.0011622945021809625 18 0.0 0.0 0.0 5.811472510904813E-4 0.0011622945021809625 19 0.0 0.0 0.0 5.811472510904813E-4 0.0011622945021809625 20 0.0 0.0 0.0 6.641682869605501E-4 0.0011622945021809625 21 0.0 0.0 0.0 7.471893228306188E-4 0.0011622945021809625 22 0.0 0.0 0.0 0.0014943786456612376 0.0011622945021809625 23 0.0 0.0 0.0 0.0033208414348027504 0.0013283365739211002 24 0.0 0.0 0.0 0.005147304223944263 0.0013283365739211002 25 0.0 0.0 0.0 0.005728451475034744 0.0013283365739211002 26 0.0 0.0 0.0 0.006890745977215707 0.0013283365739211002 27 0.0 0.0 0.0 0.008219082551136807 0.0014943786456612376 28 0.0 0.0 0.0 0.011539923985939558 0.0014943786456612376 29 0.0 0.0 0.0 0.01743441753271444 0.0014943786456612376 30 0.0 0.0 0.0 0.02872527841104379 0.0014943786456612376 31 0.0 0.0 0.0 0.05130700016770249 0.0015773996815313064 32 0.0 0.0 0.0 0.079700194435266 0.0016604207174013752 33 0.0 0.0 0.0 0.10419140001693629 0.0016604207174013752 34 0.0 0.0 0.0 0.13416199396603112 0.0016604207174013752 35 0.0 0.0 0.0 0.1679515555651491 0.0016604207174013752 36 0.0 0.0 0.0 0.21427729358064745 0.0016604207174013752 37 0.0 0.0 0.0 0.2878339313615284 0.0016604207174013752 38 0.0 0.0 0.0 0.3818967650023163 0.001743441753271444 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGAC 60 2.8727137E-4 22.000065 3 GATATAC 490 0.0 21.101225 1 CCGTCGT 310 0.0 19.16214 9 CGTCGTA 305 0.0 18.754152 10 ATACACT 545 0.0 18.568861 4 ACCGTCG 320 0.0 18.561783 8 GTTATAT 180 1.4551915E-11 18.332624 1 CGTCTTA 195 1.8189894E-12 18.052084 15 GTCATAC 110 2.797442E-6 17.999306 1 AAACGCT 270 0.0 17.925976 29 ATATACA 595 0.0 17.377478 2 GTAAACG 280 0.0 17.286482 27 GTATTAC 140 8.3757186E-8 17.285046 1 GTCGTAG 320 0.0 17.18755 11 TAAACGC 295 0.0 17.152592 28 ATCCCGT 335 0.0 17.074675 20 AACGCTT 285 0.0 16.983208 30 CCCGTTT 350 0.0 16.971476 22 AATCCCG 325 0.0 16.923126 19 ACTGTTC 590 0.0 16.779013 8 >>END_MODULE