##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063931_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1395055 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.328442247796684 32.0 32.0 32.0 32.0 32.0 2 31.379740583704585 32.0 32.0 32.0 32.0 32.0 3 31.450294074427173 32.0 32.0 32.0 32.0 32.0 4 31.535752353849848 32.0 32.0 32.0 32.0 32.0 5 31.4788728759798 32.0 32.0 32.0 32.0 32.0 6 35.054641573271304 36.0 36.0 36.0 36.0 36.0 7 35.07847575902025 36.0 36.0 36.0 36.0 36.0 8 35.01547967642853 36.0 36.0 36.0 36.0 36.0 9 35.13487855317532 36.0 36.0 36.0 36.0 36.0 10 34.985860055696726 36.0 36.0 36.0 36.0 36.0 11 35.132378293328934 36.0 36.0 36.0 36.0 36.0 12 35.0385246459817 36.0 36.0 36.0 36.0 36.0 13 35.084284848984446 36.0 36.0 36.0 36.0 36.0 14 35.026051302636816 36.0 36.0 36.0 36.0 36.0 15 34.99298522280483 36.0 36.0 36.0 36.0 36.0 16 35.012985151123075 36.0 36.0 36.0 36.0 36.0 17 34.97736074921777 36.0 36.0 36.0 36.0 36.0 18 34.97179681087842 36.0 36.0 36.0 36.0 36.0 19 34.97004777589414 36.0 36.0 36.0 36.0 36.0 20 34.96526015103347 36.0 36.0 36.0 36.0 36.0 21 34.965751171100784 36.0 36.0 36.0 36.0 36.0 22 34.95058115988259 36.0 36.0 36.0 36.0 36.0 23 34.89588940937813 36.0 36.0 36.0 32.0 36.0 24 34.873468071151315 36.0 36.0 36.0 32.0 36.0 25 34.845143023034936 36.0 36.0 36.0 32.0 36.0 26 34.7827325804359 36.0 36.0 36.0 32.0 36.0 27 34.778605144600036 36.0 36.0 36.0 32.0 36.0 28 34.76479565321797 36.0 36.0 36.0 32.0 36.0 29 34.73980667428883 36.0 36.0 36.0 32.0 36.0 30 34.72284461902936 36.0 36.0 36.0 32.0 36.0 31 34.705375056897395 36.0 36.0 36.0 32.0 36.0 32 34.66842024149585 36.0 36.0 36.0 32.0 36.0 33 34.660700832583665 36.0 36.0 36.0 32.0 36.0 34 34.65515624831996 36.0 36.0 36.0 32.0 36.0 35 34.62848418162725 36.0 36.0 36.0 32.0 36.0 36 34.60493743974252 36.0 36.0 36.0 32.0 36.0 37 34.58581991391021 36.0 36.0 36.0 32.0 36.0 38 34.55522183713187 36.0 36.0 36.0 32.0 36.0 39 34.55446631136407 36.0 36.0 36.0 32.0 36.0 40 34.54085967936748 36.0 36.0 36.0 32.0 36.0 41 34.52665952238442 36.0 36.0 36.0 32.0 36.0 42 34.48096454978477 36.0 36.0 36.0 32.0 36.0 43 34.46299106486841 36.0 36.0 36.0 32.0 36.0 44 34.41816344158474 36.0 36.0 36.0 32.0 36.0 45 34.398975667626004 36.0 36.0 36.0 32.0 36.0 46 34.380135550211286 36.0 36.0 36.0 32.0 36.0 47 34.35049155768052 36.0 36.0 36.0 32.0 36.0 48 34.3094996254628 36.0 36.0 36.0 32.0 36.0 49 34.29597542749211 36.0 36.0 36.0 32.0 36.0 50 33.69494679421241 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 10.0 21 54.0 22 123.0 23 392.0 24 1086.0 25 2580.0 26 5188.0 27 9568.0 28 15825.0 29 24457.0 30 35106.0 31 50432.0 32 72986.0 33 116394.0 34 243598.0 35 817252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.620824500897164 17.690058374726604 11.698386970743817 26.990730153632413 2 16.16300491021827 20.015985090140138 36.9027633418157 26.918246657825883 3 18.570073782248823 23.28323480646944 28.676155925482295 29.47053548579944 4 12.736343728383467 15.821168341033149 35.17997498306518 36.262512947518196 5 14.51756382364853 36.532824870704026 33.624982527570594 15.324628778076848 6 35.2334072374415 35.11341162437789 16.277039334045853 13.37614180413476 7 30.628183118228314 30.036521857561173 20.44808269208024 18.887212332130275 8 28.009935092164824 33.782395676156135 18.84198114052851 19.365688091150528 9 27.250434037111425 14.03886047875261 17.89437163899008 40.81633384514588 10 15.592339739821826 27.306880643191185 32.120492256875046 24.980287360111937 11 37.47837898864203 20.80111536821129 22.196400858747506 19.52410478439918 12 24.471884242473767 23.258812920503434 29.212775992900635 23.056526844122164 13 30.23255813953488 19.45687929241195 24.584799530339076 25.72576303771409 14 23.579618765805908 18.966444165362052 25.155263474805167 32.29867359402687 15 25.322244070357847 27.193664725663325 21.79402903117816 25.69006217280067 16 25.8347221774208 25.59731048102391 23.518596174316958 25.049371167238334 17 24.33939880506503 25.713896584722466 25.011773729351173 24.934930880861327 18 24.90550538223279 25.175029192439286 25.635083398265156 24.28438202706277 19 25.692392056227177 24.951489367802704 24.92711756884137 24.42900100712875 20 25.970541473184394 24.59725342390143 24.826134765448597 24.606070337465574 21 26.411145080301495 24.36721132858561 24.37151223428467 24.850131356828225 22 26.013401631764793 24.400560838505175 24.737321996137783 24.848715533592248 23 25.152128363436432 24.399532916284063 24.816582188741677 25.63175653153783 24 25.13562257356019 24.78767755661454 24.9196443419868 25.157055527838466 25 25.407392380527742 24.30118040387633 25.000878116687016 25.290549098908915 26 24.906844943246742 24.970429810765125 25.300038853436526 24.82268639255161 27 25.25027258474859 24.771197272503745 24.775785155188714 25.20274498755895 28 25.009677336108936 24.67799560147153 25.0426519628505 25.269675099569035 29 25.11223813193312 24.750094084335405 24.916686080894607 25.220981702836866 30 25.101593889671435 24.89980394476045 25.03499962365996 24.963602541908152 31 25.408935870654542 24.47693915676556 24.80927795882612 25.30484701375378 32 25.206090235265442 24.825880632535736 24.66810511677252 25.2999240154263 33 24.908350860290437 24.718099145946148 24.908709284771117 25.4648407089923 34 25.52638615199232 24.63572494087945 25.027185775799964 24.810703131328264 35 25.39855945130693 24.50552822030302 25.23970913762057 24.856203190769477 36 25.074966253536836 24.793954813073626 24.938116549494932 25.192962383894603 37 25.59536866190974 24.58405554623668 24.732942514003405 25.08763327785018 38 25.089107519728394 24.668588846577354 24.82916876949899 25.413134864195264 39 25.64687986557745 24.41448196564311 24.63311933155747 25.305518837221975 40 25.6558088590019 24.636119719031736 24.841992985112178 24.866078436854185 41 25.07883439079062 24.683497573140894 25.27202255462852 24.965645481439957 42 25.674304978606177 24.812387412734786 24.879411109016374 24.63389649964266 43 25.20990452596666 24.27466185533164 25.12904657145786 25.38638704724384 44 24.986398229726912 24.624114451280573 24.93808416825623 25.45140315073629 45 25.079961750255546 24.686783623718856 24.88541563623174 25.347838989793857 46 25.021504698059704 24.56517500523281 24.8191454893179 25.594174807389585 47 25.164244132909257 24.566692974401214 25.204601774732676 25.064461117956853 48 25.175391122022905 24.864500636189316 24.60622569488002 25.353882546907762 49 25.126679956503384 24.694366012425352 24.793287127137287 25.38566690393398 50 25.121716940016057 24.975627938983827 24.783375387085673 25.11927973391444 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 13.0 2 18.0 3 56.0 4 94.0 5 122.0 6 150.0 7 146.0 8 142.0 9 183.5 10 225.0 11 343.5 12 462.0 13 872.0 14 1282.0 15 1671.0 16 2060.0 17 2095.0 18 2130.0 19 2199.5 20 2269.0 21 2673.5 22 3078.0 23 3813.0 24 4548.0 25 5944.0 26 7340.0 27 9326.0 28 11312.0 29 13583.5 30 15855.0 31 18446.0 32 21037.0 33 25043.0 34 29049.0 35 33276.0 36 37503.0 37 42469.5 38 47436.0 39 51787.5 40 56139.0 41 61487.0 42 66835.0 43 71356.0 44 75877.0 45 83320.0 46 90763.0 47 96245.0 48 101727.0 49 106233.0 50 110739.0 51 110980.5 52 111222.0 53 111305.0 54 111388.0 55 108849.0 56 106310.0 57 101930.0 58 97550.0 59 90253.0 60 82956.0 61 73292.0 62 63628.0 63 54730.0 64 45832.0 65 38722.5 66 31613.0 67 26424.5 68 21236.0 69 17711.5 70 14187.0 71 10935.5 72 7684.0 73 6442.5 74 5201.0 75 4174.5 76 3148.0 77 2605.0 78 2062.0 79 1686.5 80 1311.0 81 1028.0 82 745.0 83 617.0 84 489.0 85 353.5 86 218.0 87 143.5 88 69.0 89 60.5 90 52.0 91 43.0 92 34.0 93 22.0 94 10.0 95 13.0 96 16.0 97 11.5 98 7.0 99 8.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0073115396883993815 2 3.5840880825487167E-4 3 2.8672704660389736E-4 4 0.0 5 0.0 6 2.8672704660389736E-4 7 0.0 8 0.0 9 9.318629014626663E-4 10 7.884993781607176E-4 11 0.0 12 7.168176165097434E-5 13 4.30090569905846E-4 14 5.017723315568203E-4 15 0.005161086838870152 16 7.168176165097433E-4 17 0.0 18 1.4336352330194868E-4 19 0.0 20 6.45135854858769E-4 21 0.0 22 7.168176165097434E-5 23 0.0011469081864155894 24 5.017723315568203E-4 25 0.001720362279623384 26 0.004946041553917229 27 0.005447813885474049 28 0.0030823157509918967 29 0.00215045284952923 30 0.0028672704660389734 31 0.006666403833540614 32 0.0025088616577841017 33 0.004372587460709434 34 0.001720362279623384 35 0.0022221346111802043 36 0.0067380855951915865 37 0.0026522251810860505 38 0.007956675543258152 39 0.0036557698441996907 40 0.0015769987563214352 41 0.003010633989340922 42 0.0018637258029253327 43 0.0011469081864155894 44 0.0011469081864155894 45 9.318629014626663E-4 46 7.884993781607176E-4 47 0.0020070893262272814 48 0.00215045284952923 49 2.8672704660389736E-4 50 0.001075226424764615 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1395055.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.9350169469741 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69131125117188 38.83428381586948 2 15.591096179625435 17.12994265699253 3 6.089341702936612 10.035542689402169 4 2.8512600372660453 6.265360738697609 5 1.5048019443574396 4.133316015755777 6 0.8904207393933345 2.934916704510603 7 0.566674920999222 2.1791207471962233 8 0.3788125525720396 1.6648059196217213 9 0.2639946174152424 1.3052293903454657 >10 1.0906774461523296 9.866380316380392 >50 0.04878017065813035 1.8546240489901704 >100 0.03138401261114867 3.319586442436745 >500 0.0014444248411698004 0.4768905138010431 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4336352330194868E-4 2 0.0 0.0 0.0 0.0 1.4336352330194868E-4 3 0.0 0.0 0.0 0.0 1.4336352330194868E-4 4 0.0 0.0 0.0 0.0 1.4336352330194868E-4 5 0.0 0.0 0.0 7.168176165097434E-5 1.4336352330194868E-4 6 0.0 0.0 0.0 7.168176165097434E-5 2.15045284952923E-4 7 0.0 0.0 0.0 7.168176165097434E-5 2.15045284952923E-4 8 0.0 0.0 0.0 7.168176165097434E-5 2.15045284952923E-4 9 0.0 0.0 0.0 1.4336352330194868E-4 2.15045284952923E-4 10 0.0 0.0 0.0 1.4336352330194868E-4 2.15045284952923E-4 11 0.0 0.0 0.0 1.4336352330194868E-4 2.15045284952923E-4 12 0.0 0.0 0.0 1.4336352330194868E-4 3.5840880825487167E-4 13 0.0 0.0 0.0 1.4336352330194868E-4 4.30090569905846E-4 14 0.0 0.0 0.0 1.4336352330194868E-4 4.30090569905846E-4 15 0.0 0.0 0.0 1.4336352330194868E-4 4.30090569905846E-4 16 0.0 0.0 0.0 1.4336352330194868E-4 4.30090569905846E-4 17 0.0 0.0 0.0 1.4336352330194868E-4 4.30090569905846E-4 18 0.0 0.0 0.0 1.4336352330194868E-4 5.017723315568203E-4 19 0.0 0.0 0.0 1.4336352330194868E-4 6.45135854858769E-4 20 0.0 0.0 0.0 1.4336352330194868E-4 7.168176165097433E-4 21 0.0 0.0 0.0 2.15045284952923E-4 7.168176165097433E-4 22 0.0 0.0 0.0 2.8672704660389736E-4 7.168176165097433E-4 23 0.0 0.0 0.0 5.017723315568203E-4 7.168176165097433E-4 24 0.0 0.0 0.0 5.734540932077947E-4 7.168176165097433E-4 25 0.0 0.0 0.0 5.734540932077947E-4 7.168176165097433E-4 26 0.0 0.0 0.0 6.45135854858769E-4 7.168176165097433E-4 27 0.0 0.0 0.0 0.001075226424764615 8.60181139811692E-4 28 0.0 0.0 0.0 0.002580543419435076 8.60181139811692E-4 29 0.0 0.0 0.0 0.006021267978681844 8.60181139811692E-4 30 0.0 0.0 0.0 0.011684127149108816 8.60181139811692E-4 31 0.0 0.0 0.0 0.02695234238076635 8.60181139811692E-4 32 0.0 0.0 0.0 0.043940919892047264 8.60181139811692E-4 33 0.0 0.0 0.0 0.0617179967814889 8.60181139811692E-4 34 0.0 0.0 0.0 0.08221898061366756 9.318629014626663E-4 35 0.0 0.0 0.0 0.10644741605169689 9.318629014626663E-4 36 0.0 0.0 0.0 0.14028120755095677 9.318629014626663E-4 37 0.0 0.0 0.0 0.19260889355616803 9.318629014626663E-4 38 0.0 0.0 0.0 0.2725340577970044 9.318629014626663E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1340 0.0 29.224215 1 GGTATCA 440 0.0 26.500301 1 CGCCCTA 50 8.339651E-5 26.401247 24 TATACGG 45 0.0013991046 24.442097 5 TAATACC 110 2.0190782E-10 23.997692 4 TCAACGC 1970 0.0 19.094612 4 TATCAAC 2050 0.0 18.778683 2 CAACGCA 2020 0.0 18.730871 5 ATCAACG 2045 0.0 18.50189 3 AACGCAG 2075 0.0 18.340405 6 TAGGACG 295 0.0 17.896585 4 CGCGGTT 240 0.0 17.41749 10 TACGAAT 170 2.4683686E-9 16.823118 41 ATACGAA 170 2.4683686E-9 16.823118 40 TATACTG 250 0.0 16.718393 5 TACGACG 200 7.2759576E-11 16.498415 5 CGCAATA 175 3.621608E-9 16.3448 36 ATACCGT 270 0.0 16.294731 6 GTATAGA 230 1.8189894E-12 16.261055 1 GTGTATA 420 0.0 16.23828 1 >>END_MODULE