##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063928_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2712280 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310242305366703 32.0 32.0 32.0 32.0 32.0 2 31.310436238146504 32.0 32.0 32.0 32.0 32.0 3 31.41954223015323 32.0 32.0 32.0 32.0 32.0 4 31.518646304953766 32.0 32.0 32.0 32.0 32.0 5 31.43531715014674 32.0 32.0 32.0 32.0 32.0 6 35.03954311501762 36.0 36.0 36.0 36.0 36.0 7 35.05693770554662 36.0 36.0 36.0 36.0 36.0 8 34.99721894494669 36.0 36.0 36.0 36.0 36.0 9 35.13749502263778 36.0 36.0 36.0 36.0 36.0 10 34.95946362469952 36.0 36.0 36.0 36.0 36.0 11 35.13558039730411 36.0 36.0 36.0 36.0 36.0 12 35.02825961921336 36.0 36.0 36.0 36.0 36.0 13 35.078470143200555 36.0 36.0 36.0 36.0 36.0 14 35.02340982494433 36.0 36.0 36.0 36.0 36.0 15 34.980640273128145 36.0 36.0 36.0 36.0 36.0 16 34.99906757414426 36.0 36.0 36.0 36.0 36.0 17 34.95233641069506 36.0 36.0 36.0 36.0 36.0 18 34.95532983320306 36.0 36.0 36.0 36.0 36.0 19 34.95528264043536 36.0 36.0 36.0 36.0 36.0 20 34.9471518427301 36.0 36.0 36.0 36.0 36.0 21 34.94701579482944 36.0 36.0 36.0 36.0 36.0 22 34.92124891235418 36.0 36.0 36.0 32.0 36.0 23 34.87492589260696 36.0 36.0 36.0 32.0 36.0 24 34.844718834338636 36.0 36.0 36.0 32.0 36.0 25 34.813992655625526 36.0 36.0 36.0 32.0 36.0 26 34.75193121654107 36.0 36.0 36.0 32.0 36.0 27 34.74813736044951 36.0 36.0 36.0 32.0 36.0 28 34.721575574793164 36.0 36.0 36.0 32.0 36.0 29 34.69792351822083 36.0 36.0 36.0 32.0 36.0 30 34.67750011060805 36.0 36.0 36.0 32.0 36.0 31 34.66959384724291 36.0 36.0 36.0 32.0 36.0 32 34.62696771719734 36.0 36.0 36.0 32.0 36.0 33 34.60182540150722 36.0 36.0 36.0 32.0 36.0 34 34.60282456088604 36.0 36.0 36.0 32.0 36.0 35 34.56472045659003 36.0 36.0 36.0 32.0 36.0 36 34.536538631704694 36.0 36.0 36.0 32.0 36.0 37 34.52426740602003 36.0 36.0 36.0 32.0 36.0 38 34.48771218310794 36.0 36.0 36.0 32.0 36.0 39 34.4785597357205 36.0 36.0 36.0 32.0 36.0 40 34.46298722845724 36.0 36.0 36.0 32.0 36.0 41 34.44706667453213 36.0 36.0 36.0 32.0 36.0 42 34.38568989927294 36.0 36.0 36.0 32.0 36.0 43 34.38003819664636 36.0 36.0 36.0 32.0 36.0 44 34.31701446753285 36.0 36.0 36.0 32.0 36.0 45 34.28455948500892 36.0 36.0 36.0 32.0 36.0 46 34.25894302948073 36.0 36.0 36.0 32.0 36.0 47 34.23874526228855 36.0 36.0 36.0 32.0 36.0 48 34.188778813396844 36.0 36.0 36.0 32.0 36.0 49 34.16881442918873 36.0 36.0 36.0 32.0 36.0 50 33.53268320379902 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 3.0 19 2.0 20 23.0 21 84.0 22 232.0 23 753.0 24 1955.0 25 4458.0 26 9507.0 27 17749.0 28 30002.0 29 47390.0 30 69794.0 31 102232.0 32 150989.0 33 250107.0 34 519778.0 35 1507220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.409529020829986 17.974802843013336 12.014482023206046 26.601186112950636 2 15.918080366689427 20.315027865977846 37.343544222031156 26.423347545301574 3 18.33910340784656 24.31074339944032 28.526216047812348 28.823937144900764 4 12.368376421313434 16.135797189080773 35.91000929107614 35.585817098529645 5 14.454149276623356 36.85633489167785 33.13260430339051 15.556911528308287 6 34.29250246471785 35.60969782596032 16.729406056458814 13.368393652863016 7 30.522767401707124 30.29937576434855 20.534480807085707 18.64337602685861 8 28.059576466875274 33.2470958924211 19.035467958864114 19.657859681839515 9 27.773515228852176 14.071106198426179 18.039209469028147 40.1161691036935 10 15.844714059598248 26.611930046555255 31.40254569895744 26.140810194889063 11 37.40421793201801 20.84650645933288 22.635556766510206 19.113718842138912 12 25.41779533254949 23.141549541657493 28.57201321548384 22.868641910309176 13 29.77170414449889 19.42384054684821 24.980809432689224 25.823645875963674 14 23.913597320627648 19.462429537985983 24.932814753065415 31.691158388320957 15 25.38216940963399 27.167248984937398 21.871040960891513 25.579540644537097 16 25.865155208259978 25.505455046881586 23.6694209513177 24.959968793540735 17 24.291223619980236 25.688756323093486 24.987538159777014 25.03248189714926 18 25.040408926538344 24.70629789342662 25.9879171410537 24.26537603898134 19 25.93593800637766 24.524246952470598 25.07769296595225 24.462122075199492 20 26.242155072039502 24.086058057813 24.660043904313078 25.011742965834422 21 27.174369902812394 23.842707980002064 24.102894981344107 24.88002713584143 22 26.28983923465016 24.223087915831577 24.530984309856372 24.95608853966189 23 24.739027311939836 24.03393188772303 25.167710876955983 26.059329923381153 24 25.18667990530417 24.60823305114585 25.007567481472115 25.197519562077865 25 25.327543761911308 24.223988130813247 25.10352171070848 25.344946396566964 26 24.86102349096602 25.024731310853497 25.448749312814307 24.66549588536618 27 25.466647395092828 24.602155073241814 24.704879444506716 25.226318087158646 28 24.79559702628931 24.591258576628945 25.253017236770447 25.36012716031129 29 24.886697981727146 24.51519419516116 25.119274985067584 25.478832838044113 30 24.74184117835533 24.733471548975054 25.368531004683675 25.156156267985946 31 25.475792261960066 24.448915751142653 24.50577189403962 25.569520092857662 32 25.179595900007374 24.74869109947644 24.366012830912176 25.70570016960401 33 24.728178811866076 24.404673897533673 25.13040300954697 25.73674428105328 34 25.48668690104328 24.436733652481955 25.232024293050404 24.84455515342436 35 25.87112002884745 24.38900109800243 25.117487735039994 24.62239113811012 36 24.87693919856169 24.846593418911137 24.874874358148045 25.401593024379128 37 25.743364965780476 24.60012078781975 24.549940011665832 25.106574234733948 38 25.08168100070979 24.571370629499555 24.951079892702083 25.395868477088573 39 25.70993707269105 24.341331705121018 24.50219878717355 25.44653243501438 40 25.926121200814382 24.490510746523338 24.92602017678468 24.6573478758776 41 24.933107833822053 24.791672888550664 25.374446805380575 24.90077247224671 42 25.988436851204376 25.01857322940436 24.815567371140503 24.177422548250764 43 25.219577841275694 24.2541432390082 25.12290533689741 25.403373582818695 44 24.869250573970163 24.795584771162236 24.662595506533506 25.672569148334095 45 25.084321197766574 25.00390819718551 24.736786606534505 25.17498399851341 46 25.062355862557173 24.595032546718507 24.751839336640543 25.590772254083777 47 25.33625442071327 24.546757062080236 25.105890646522866 25.011097870683628 48 25.74201719246304 25.031496164602256 24.24329012788346 24.98319651505124 49 25.150639334609753 24.991178985301257 24.46206558115647 25.39611609893252 50 25.1339759261806 25.31050891126563 24.363174216450528 25.192340946103243 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 30.0 2 30.0 3 107.5 4 185.0 5 227.0 6 269.0 7 287.5 8 306.0 9 399.5 10 493.0 11 746.0 12 999.0 13 1862.0 14 2725.0 15 3734.5 16 4744.0 17 5116.0 18 5488.0 19 5506.0 20 5524.0 21 6291.0 22 7058.0 23 8286.0 24 9514.0 25 11378.5 26 13243.0 27 17336.0 28 21429.0 29 25782.5 30 30136.0 31 35239.0 32 40342.0 33 47795.5 34 55249.0 35 65157.0 36 75065.0 37 86800.0 38 98535.0 39 106935.0 40 115335.0 41 125646.0 42 135957.0 43 140814.0 44 145671.0 45 159401.0 46 173131.0 47 185601.5 48 198072.0 49 205882.0 50 213692.0 51 210022.5 52 206353.0 53 204069.5 54 201786.0 55 201841.5 56 201897.0 57 196892.5 58 191888.0 59 174632.0 60 157376.0 61 138447.0 62 119518.0 63 103713.5 64 87909.0 65 74615.5 66 61322.0 67 52307.0 68 43292.0 69 38756.0 70 34220.0 71 26602.0 72 18984.0 73 16044.5 74 13105.0 75 10199.0 76 7293.0 77 6407.0 78 5521.0 79 4577.5 80 3634.0 81 2949.0 82 2264.0 83 1812.5 84 1361.0 85 1008.0 86 655.0 87 448.5 88 242.0 89 197.0 90 152.0 91 134.0 92 116.0 93 84.5 94 53.0 95 58.0 96 63.0 97 45.5 98 28.0 99 27.0 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00840621174804961 2 4.42432197265769E-4 3 3.686934977214742E-4 4 0.0 5 0.0 6 7.373869954429484E-5 7 1.1060804931644226E-4 8 3.686934977214742E-5 9 9.954724438479801E-4 10 7.00517645670801E-4 11 1.1060804931644226E-4 12 2.5808544840503193E-4 13 3.686934977214742E-4 14 1.1060804931644226E-4 15 0.00486675416992346 16 7.742563452150957E-4 17 0.0 18 2.9495479817717935E-4 19 3.686934977214742E-5 20 6.636482958986535E-4 21 0.0 22 1.4747739908858967E-4 23 8.479950447593907E-4 24 6.267789461265062E-4 25 0.0017328594392909285 26 0.004829884820151312 27 0.006194050761720766 28 0.004166236524252658 29 0.0022121609863288453 30 0.00342884952880971 31 0.006341528160809356 32 0.0029495479817717935 33 0.004092497824708364 34 0.002359638385417435 35 0.003023286681316088 36 0.007595086053062368 37 0.003170764080404678 38 0.007558216703290221 39 0.003797543026531184 40 0.0019909448876959603 41 0.002912678631999646 42 0.001585382040202339 43 0.0011060804931644227 44 0.00114294984293657 45 0.0011798191927087174 46 9.217337443036854E-4 47 0.001769728789063076 48 0.0016591207397466338 49 2.5808544840503193E-4 50 0.0014379046411137494 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2712280.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.58990144309976 #Duplication Level Percentage of deduplicated Percentage of total 1 75.38178471971491 38.88938844295056 2 13.945531217678974 14.388971621834584 3 4.573380268856472 7.078207119963675 4 2.046886318504252 4.223946537474546 5 1.0716526369872306 2.764322696170459 6 0.6375977024080549 1.9736161576547042 7 0.4480647631120393 1.6180931878353164 8 0.3016960545484184 1.2451575775939965 9 0.23603703513357582 1.0959414641516385 >10 1.2031573948690886 11.05224272278909 >50 0.08174235871653046 2.9282307981746967 >100 0.059448577939676006 6.434709569996492 >500 0.008992369841803965 3.165981873171901 >1k 0.004028581689112302 3.141190230238369 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1060804931644226E-4 2 0.0 0.0 0.0 0.0 1.1060804931644226E-4 3 0.0 0.0 0.0 0.0 1.1060804931644226E-4 4 0.0 0.0 0.0 0.0 1.1060804931644226E-4 5 0.0 0.0 0.0 0.0 1.1060804931644226E-4 6 0.0 0.0 0.0 0.0 1.1060804931644226E-4 7 0.0 0.0 0.0 0.0 1.1060804931644226E-4 8 0.0 0.0 0.0 0.0 1.1060804931644226E-4 9 0.0 0.0 0.0 0.0 1.1060804931644226E-4 10 0.0 0.0 0.0 0.0 1.1060804931644226E-4 11 0.0 0.0 0.0 3.686934977214742E-5 1.1060804931644226E-4 12 0.0 0.0 0.0 3.686934977214742E-5 4.055628474936216E-4 13 0.0 0.0 0.0 7.373869954429484E-5 4.42432197265769E-4 14 0.0 0.0 0.0 7.373869954429484E-5 4.42432197265769E-4 15 0.0 0.0 0.0 1.1060804931644226E-4 6.267789461265061E-4 16 0.0 0.0 0.0 1.1060804931644226E-4 6.636482958986535E-4 17 0.0 0.0 0.0 1.4747739908858967E-4 6.636482958986535E-4 18 0.0 0.0 0.0 1.843467488607371E-4 8.111256949872432E-4 19 0.0 0.0 0.0 1.843467488607371E-4 8.111256949872432E-4 20 0.0 0.0 0.0 1.843467488607371E-4 8.479950447593906E-4 21 0.0 0.0 0.0 2.9495479817717935E-4 9.217337443036854E-4 22 0.0 0.0 0.0 2.9495479817717935E-4 9.586030940758329E-4 23 0.0 0.0 0.0 5.161708968100639E-4 9.586030940758329E-4 24 0.0 0.0 0.0 6.267789461265061E-4 9.954724438479804E-4 25 0.0 0.0 0.0 7.742563452150957E-4 9.954724438479804E-4 26 0.0 0.0 0.0 8.479950447593906E-4 0.0010323417936201277 27 3.686934977214742E-5 0.0 0.0 0.0012535578922530121 0.001069211143392275 28 3.686934977214742E-5 0.0 0.0 0.002322769035645287 0.001069211143392275 29 3.686934977214742E-5 0.0 0.0 0.004534930021974132 0.001069211143392275 30 3.686934977214742E-5 0.0 0.0 0.008885513295087528 0.001069211143392275 31 3.686934977214742E-5 0.0 0.0 0.023375167755541465 0.0011798191927087174 32 3.686934977214742E-5 0.0 0.0 0.039929505803235656 0.0012904272420251597 33 3.686934977214742E-5 0.0 0.0 0.05523028595867683 0.0012904272420251597 34 3.686934977214742E-5 0.0 0.0 0.07351748344566195 0.0013641659415694544 35 3.686934977214742E-5 0.0 0.0 0.09445927411624169 0.0013641659415694544 36 3.686934977214742E-5 0.0 0.0 0.12568761337325055 0.0013641659415694544 37 3.686934977214742E-5 0.0 0.0 0.1728435117318271 0.0013641659415694544 38 3.686934977214742E-5 0.0 0.0 0.2370699190349079 0.0014379046411137494 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4155 0.0 23.825665 1 GGTATCA 2010 0.0 19.810074 1 TAGGACG 835 0.0 18.17884 4 TAATACT 510 0.0 18.11685 4 TACGAAT 745 0.0 18.012962 41 ATACGAA 710 0.0 17.97137 40 CGCAATA 725 0.0 17.904642 36 CTAGCGG 745 0.0 17.718323 29 CGAGCCG 970 0.0 17.689943 15 AACGCAG 5585 0.0 17.449547 6 CGTCTTA 285 0.0 16.98171 15 GATATAC 435 0.0 16.688921 1 GTCCTAC 1130 0.0 16.547945 1 TCAACGC 5980 0.0 16.370518 4 TAGCGGC 780 0.0 16.360064 30 TCTAGCG 780 0.0 16.360064 28 TATCAAC 6070 0.0 16.34464 2 CAATACG 795 0.0 16.32753 38 GTTACGT 95 3.346536E-4 16.211605 31 ATCAACG 6040 0.0 16.171177 3 >>END_MODULE