##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063925_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 767383 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.168045161281917 32.0 32.0 32.0 32.0 32.0 2 30.998196467735145 32.0 32.0 32.0 32.0 32.0 3 31.025362824039625 32.0 32.0 32.0 32.0 32.0 4 31.005746804398846 32.0 32.0 32.0 32.0 32.0 5 31.0333471030763 32.0 32.0 32.0 32.0 32.0 6 34.62265127061715 36.0 36.0 36.0 32.0 36.0 7 34.52042721822089 36.0 36.0 36.0 32.0 36.0 8 34.46306081839186 36.0 36.0 36.0 32.0 36.0 9 34.49758464808316 36.0 36.0 36.0 32.0 36.0 10 34.39899111656109 36.0 36.0 36.0 32.0 36.0 11 34.565029457259286 36.0 36.0 36.0 32.0 36.0 12 34.44188495184282 36.0 36.0 36.0 32.0 36.0 13 34.50406250855179 36.0 36.0 36.0 32.0 36.0 14 34.42817211223079 36.0 36.0 36.0 32.0 36.0 15 34.409319726916024 36.0 36.0 36.0 32.0 36.0 16 34.40400165236915 36.0 36.0 36.0 32.0 36.0 17 34.325734346473666 36.0 36.0 36.0 32.0 36.0 18 34.3311814309152 36.0 36.0 36.0 32.0 36.0 19 34.31936725207621 36.0 36.0 36.0 32.0 36.0 20 34.26059477470832 36.0 36.0 36.0 32.0 36.0 21 34.22483818380131 36.0 36.0 36.0 32.0 36.0 22 34.22486424640629 36.0 36.0 36.0 32.0 36.0 23 34.20603792369651 36.0 36.0 36.0 32.0 36.0 24 34.18924578730569 36.0 36.0 36.0 32.0 36.0 25 33.77079111734297 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 8.0 5 9.0 6 29.0 7 12.0 8 30.0 9 42.0 10 79.0 11 31.0 12 44.0 13 48.0 14 122.0 15 212.0 16 316.0 17 467.0 18 645.0 19 758.0 20 1017.0 21 1341.0 22 2110.0 23 2754.0 24 3826.0 25 5068.0 26 7058.0 27 9038.0 28 12652.0 29 17145.0 30 22964.0 31 32498.0 32 47679.0 33 70093.0 34 162508.0 35 366776.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.4707669083149 17.109529092300413 11.413088113175325 25.006615886209367 2 16.537192915238023 20.295515529682525 37.69543238498861 25.47185917009085 3 19.112417167840597 25.144097007291183 28.302958826634 27.440526998234215 4 12.341808031089094 15.400805115834771 35.403593959937076 36.85379289313905 5 14.254473705130996 37.00061382714054 32.902828948140076 15.842083519588385 6 33.33129152580367 35.343948994779055 17.294544203395308 14.030215276021968 7 29.43783261016622 30.739663750102643 21.069383637437163 18.753120002293976 8 28.524089239296785 31.744895751043533 19.86283512317724 19.868179886482444 9 27.860147117493213 13.734182001183823 19.015366242245825 39.39030463907714 10 16.3906339234723 26.685338319394784 30.93900680367905 25.985020953453862 11 36.84038281005528 21.290549702722437 22.650203400438095 19.218864086784187 12 25.333980103978814 23.933252226208033 28.80215729305621 21.93061037675694 13 29.86187085257227 19.44044199240831 25.835744584302073 24.861942570717353 14 23.97703370745492 19.85556742208191 25.975956591985792 30.191442278477382 15 25.038857130935494 27.002054994575648 23.77247976299758 24.186608111491278 16 24.803422726549602 25.752209619833245 25.02692750047596 24.417440153141193 17 23.141249155676334 25.434810389027835 26.211196970605798 25.21274348469003 18 23.982910708976053 24.43374769821439 28.134340815549375 23.449000777260185 19 24.974341519268965 24.34966999346638 27.02389009954317 23.652098387721487 20 25.5903211587066 23.48164937805333 26.55812703935648 24.369902423883588 21 26.98424497556739 23.359585186808086 25.803759244551728 23.852410593072797 22 25.588941053729787 23.708789775691184 26.366849243609806 24.335419926969223 23 23.956856582044878 23.85591037437479 27.125576299812842 25.061656743767486 24 24.18882402958836 24.821723866309853 26.85279373177462 24.13665837232716 25 24.342194493421946 24.28676877171384 26.865434172500496 24.50560256236372 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 349.0 1 349.0 2 711.0 3 1073.0 4 1073.0 5 1073.0 6 3068.5 7 5064.0 8 5064.0 9 5064.0 10 4530.5 11 3997.0 12 3997.0 13 3997.0 14 3029.0 15 2061.0 16 2061.0 17 2061.0 18 3625.0 19 5189.0 20 5189.0 21 5189.0 22 8673.5 23 12158.0 24 12158.0 25 12158.0 26 18766.5 27 25375.0 28 25375.0 29 25375.0 30 31163.0 31 36951.0 32 36951.0 33 36951.0 34 42283.5 35 47616.0 36 47616.0 37 47616.0 38 53179.0 39 58742.0 40 58742.0 41 58742.0 42 67934.0 43 77126.0 44 77126.0 45 77126.0 46 88727.0 47 100328.0 48 100328.0 49 100328.0 50 101966.0 51 103604.0 52 103604.0 53 103604.0 54 93382.0 55 83160.0 56 83160.0 57 83160.0 58 77203.0 59 71246.0 60 71246.0 61 71246.0 62 63493.0 63 55740.0 64 55740.0 65 55740.0 66 45919.5 67 36099.0 68 36099.0 69 36099.0 70 27633.5 71 19168.0 72 19168.0 73 19168.0 74 14879.0 75 10590.0 76 10590.0 77 10590.0 78 8712.5 79 6835.0 80 6835.0 81 6835.0 82 4606.0 83 2377.0 84 2377.0 85 2377.0 86 1859.0 87 1341.0 88 1341.0 89 1341.0 90 957.5 91 574.0 92 574.0 93 574.0 94 376.5 95 179.0 96 179.0 97 179.0 98 310.0 99 441.0 100 441.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.037790777225974514 2 0.005994399146189061 3 0.0023456344485087628 4 0.00521252099668614 5 0.008600659644532131 6 0.01159785921762666 7 0.020328831887075946 8 0.03609670790205152 9 0.049128010393766866 10 0.05798929608813331 11 0.055122409539955924 12 0.06463526035890814 13 0.06411400825923952 14 0.06776277295691982 15 0.06137743473597929 16 0.06632932968283113 17 0.06476557338382528 18 0.0764937456263691 19 0.07558155445194903 20 0.07779687587554064 21 0.07558155445194903 22 0.07597249352670048 23 0.08313970989714393 24 0.07753624982570632 25 0.07701499772603772 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 767383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.41445252275112 #Duplication Level Percentage of deduplicated Percentage of total 1 74.0039029998454 36.56862351284139 2 15.325748835133579 15.14626976378633 3 5.130174286317191 7.605142611139783 4 2.1242528767587747 4.198751716996558 5 1.043196369279705 2.5774488730839162 6 0.5899240764816089 1.7490465161596955 7 0.3312783531430981 1.1458956917243361 8 0.24836108850050456 0.9818101772965576 9 0.17214187705304093 0.7655666949733276 >10 0.8017678272562871 7.534475022605871 >50 0.10536046301861661 3.699370172028258 >100 0.110654734903324 11.078078972699757 >500 0.010853694093275953 3.5570409085696335 >1k 0.002117793969419698 2.626313265716113 >5k 2.6472424617746224E-4 0.7661661003785064 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5857 0.763243386939768 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4394 0.5725954314859725 No Hit TATCAACGCAGAGTACTTTTTTTTT 4352 0.567122284439452 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2857 0.3723043121883075 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2294 0.2989380791599501 No Hit GGTATCAACGCAGAGTACTTTTTTT 2102 0.27391797837585663 No Hit GTACATGGGGTGGTATCAACGCAAA 1733 0.22583247218142702 No Hit GTATCAACGCAGAGTACATGGGGTG 1219 0.1588515773740101 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 1126 0.14673246605671483 No Hit GCGCAAGACGGACCAGAGCGAAAGC 919 0.11975766989886405 No Hit GTACATGGGTGGTATCAACGCAAAA 875 0.11402389680250931 No Hit GATTAAGAGGGACGGCCGGGGGCAT 851 0.11089638420449761 No Hit GAATAGGACCGCGGTTCTATTTTGT 842 0.10972356698024324 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 840 0.10946294093040893 No Hit GTATCTGATCGTCTTCGAACCTCCG 832 0.10842043673107171 No Hit TATCAACGCAGAGTACATGGGGTGG 818 0.10659605438223156 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 808 0.10529292413306002 No Hit ATCAGATACCGTCGTAGTTCCGACC 794 0.10346854178421988 No Hit ATCAACGCAGAGTACTTTTTTTTTT 793 0.10333822875930274 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.60626049834307E-4 2 0.0 0.0 0.0 0.0 2.60626049834307E-4 3 0.0 0.0 0.0 0.0 2.60626049834307E-4 4 0.0 0.0 0.0 0.0 2.60626049834307E-4 5 0.0 0.0 0.0 0.0 2.60626049834307E-4 6 0.0 0.0 0.0 0.0 5.21252099668614E-4 7 0.0 0.0 0.0 0.0 5.21252099668614E-4 8 0.0 0.0 0.0 0.0 6.515651245857675E-4 9 0.0 0.0 0.0 1.303130249171535E-4 6.515651245857675E-4 10 0.0 0.0 0.0 1.303130249171535E-4 7.81878149502921E-4 11 0.0 0.0 0.0 1.303130249171535E-4 9.121911744200744E-4 12 0.0 0.0 0.0 1.303130249171535E-4 0.0018243823488401489 13 0.0 0.0 0.0 1.303130249171535E-4 0.0024759474734259166 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 70 1.3169483E-9 17.634203 1 GTTATTC 80 7.697963E-9 15.43697 3 CGTTATT 75 5.8578735E-8 15.194525 2 CACGCGC 45 6.7552185E-4 14.7782345 12 ATCGCTC 100 6.548362E-10 14.252298 16 AAATCGC 100 6.566552E-10 14.2513685 14 AAGCCCG 40 0.005277079 14.249511 5 AATCGCT 95 4.8748916E-9 14.002258 15 CAAATCG 95 4.8839865E-9 14.000432 13 CGAACGA 75 9.636769E-7 13.935581 16 GTCCTAA 135 1.8189894E-12 13.3638115 1 TCCTAAG 65 5.463907E-5 13.149108 2 CGCATCG 160 0.0 12.469134 13 CAAGACG 160 0.0 12.468322 4 GTTTTCG 85 3.928866E-6 12.296101 15 GCAAGAC 170 0.0 12.293695 3 CGCAAGA 170 0.0 12.289689 2 AACGAAC 70 1.0885338E-4 12.21546 14 TAACGAA 70 1.0891968E-4 12.2146635 13 TAAATCC 140 5.2750693E-11 12.213867 4 >>END_MODULE