##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063925_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 767383 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.088584188078183 32.0 32.0 32.0 32.0 32.0 2 31.340044019739818 32.0 32.0 32.0 32.0 32.0 3 31.424748789066214 32.0 32.0 32.0 32.0 32.0 4 31.522665995988966 32.0 32.0 32.0 32.0 32.0 5 31.425757411879076 32.0 32.0 32.0 32.0 32.0 6 35.020816202600265 36.0 36.0 36.0 36.0 36.0 7 35.05634995823468 36.0 36.0 36.0 36.0 36.0 8 35.006586020279315 36.0 36.0 36.0 36.0 36.0 9 35.11591604192431 36.0 36.0 36.0 36.0 36.0 10 34.95487911512244 36.0 36.0 36.0 36.0 36.0 11 35.11809878509167 36.0 36.0 36.0 36.0 36.0 12 35.00789957557048 36.0 36.0 36.0 36.0 36.0 13 35.065993122078545 36.0 36.0 36.0 36.0 36.0 14 34.995618876102284 36.0 36.0 36.0 36.0 36.0 15 34.970847673195784 36.0 36.0 36.0 36.0 36.0 16 34.958480967131145 36.0 36.0 36.0 36.0 36.0 17 34.9320495762872 36.0 36.0 36.0 32.0 36.0 18 34.925162532920325 36.0 36.0 36.0 36.0 36.0 19 34.920523389233274 36.0 36.0 36.0 32.0 36.0 20 34.903991878892285 36.0 36.0 36.0 32.0 36.0 21 34.876959745003475 36.0 36.0 36.0 32.0 36.0 22 34.87509496561691 36.0 36.0 36.0 32.0 36.0 23 34.8259578333114 36.0 36.0 36.0 32.0 36.0 24 34.802143128007785 36.0 36.0 36.0 32.0 36.0 25 34.769907595034034 36.0 36.0 36.0 32.0 36.0 26 34.70534661309932 36.0 36.0 36.0 32.0 36.0 27 34.709747283950776 36.0 36.0 36.0 32.0 36.0 28 34.677238093624695 36.0 36.0 36.0 32.0 36.0 29 34.64060710232049 36.0 36.0 36.0 32.0 36.0 30 34.610749782051464 36.0 36.0 36.0 32.0 36.0 31 34.604858330194965 36.0 36.0 36.0 32.0 36.0 32 34.537134651145514 36.0 36.0 36.0 32.0 36.0 33 34.47909062358692 36.0 36.0 36.0 32.0 36.0 34 34.44552459462876 36.0 36.0 36.0 32.0 36.0 35 34.382191161388775 36.0 36.0 36.0 32.0 36.0 36 34.36330098529678 36.0 36.0 36.0 32.0 36.0 37 34.34722687367325 36.0 36.0 36.0 32.0 36.0 38 34.271339083612745 36.0 36.0 36.0 32.0 36.0 39 34.26207904006213 36.0 36.0 36.0 32.0 36.0 40 34.22441075707958 36.0 36.0 36.0 32.0 36.0 41 34.17783557884394 36.0 36.0 36.0 32.0 36.0 42 34.087731940895225 36.0 36.0 36.0 32.0 36.0 43 34.062344357380866 36.0 36.0 36.0 32.0 36.0 44 33.9625662804623 36.0 36.0 36.0 32.0 36.0 45 33.90496922657917 36.0 36.0 36.0 32.0 36.0 46 33.8370435623411 36.0 36.0 36.0 32.0 36.0 47 33.769555749866754 36.0 36.0 36.0 27.0 36.0 48 33.69141484760544 36.0 36.0 36.0 27.0 36.0 49 33.630776287720735 36.0 36.0 36.0 27.0 36.0 50 32.9840405638384 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 6.0 21 28.0 22 96.0 23 280.0 24 756.0 25 1753.0 26 3577.0 27 6434.0 28 10795.0 29 16187.0 30 23417.0 31 32322.0 32 46009.0 33 72952.0 34 144213.0 35 408555.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.356867130096624 18.177375339166606 11.936579428193118 25.529178102543653 2 15.732231749589513 21.05202116291798 37.135708514686335 26.08003857280617 3 18.54869816779171 25.64296697855039 28.51181943756679 27.296515416091115 4 11.976418555010993 15.97533435064368 35.39718758429623 36.65105951004909 5 13.914303548553983 37.574457604612036 32.50163217063709 16.009606676196892 6 33.45500226093098 35.67175712779668 17.086904453187003 13.786336158085335 7 29.642081779348484 30.882663393199216 20.891290126690485 18.58396470076181 8 28.760996790390198 32.033287159084836 19.493134458282242 19.712581592242724 9 28.20515159491982 13.555841089221163 18.635763004740845 39.60324431111818 10 16.481795199249394 26.911829862649533 30.784487476869348 25.821887461231725 11 37.236164991927104 21.239459305197013 22.42582908404278 19.098546618833097 12 25.34500418305355 24.166842589479558 28.58354769853867 21.904605528928226 13 29.99791498345018 19.355338945502883 25.770804555761163 24.875941515285778 14 24.034183757242154 19.810342176386726 25.785593094443183 30.36988097192793 15 25.14869394329561 27.150653940584974 23.4296564270709 24.270995689048515 16 25.03743280664603 25.697866101971005 24.861638703371884 24.403062388011076 17 23.305832941308317 25.781128849609647 25.796636099574787 25.116402109507245 18 24.200396153144467 24.766869087023377 27.62686022570304 23.405874534129115 19 25.381491877578572 24.634145705789294 26.468564548034745 23.51579786859739 20 26.002926845795884 23.588604848451677 26.104050280239623 24.304418025512817 21 27.333678228472614 23.5427420206077 25.21192155677152 23.911658194148163 22 25.85462539566292 23.99010663514829 25.80289112477081 24.35237684441798 23 24.244078840201986 23.969115491122334 26.610327414888417 25.17647825378726 24 24.54758339751283 25.103892600657563 26.196312382799114 24.152211619030492 25 24.684277536042075 24.472775086757707 26.35101587636685 24.49193150083337 26 24.042020267311663 25.67714089117788 26.85523050939344 23.42560833211702 27 24.58919400051868 24.94536270432785 26.204920158523095 24.26052313663038 28 23.600090180138736 25.169902248378516 26.838495451246036 24.391512120236712 29 23.54042730643175 24.92881484039538 26.770050758113804 24.760707095059065 30 23.63820468077842 25.5748673032289 26.787610884718987 23.999317131273692 31 24.265341203056316 25.458831870032284 25.533115521503813 24.74271140540759 32 23.883792726424474 25.603731268399287 25.478886509859215 25.033589495317017 33 23.730432606848524 25.075845639787946 26.189290908427466 25.004430844936067 34 24.522063902043627 25.26017707418402 26.245500819691358 23.972258204080994 35 25.036456113876 25.17902265035622 26.29466444085639 23.48985679491139 36 23.727991867905594 26.2184457795212 25.710189879191482 24.343372473381727 37 24.469088824020016 26.133757297748122 25.58825062552127 23.808903252710593 38 23.847261590590687 25.829602841038675 25.768481412699963 24.554654155670676 39 24.36149722027466 25.626773980832535 25.557052787414218 24.454676011478586 40 24.79419725526838 26.157831841858005 25.81496844379634 23.23300245907728 41 23.42255229923778 26.281824899037353 26.51965236791453 23.775970433810333 42 25.11962907168883 26.74387389688443 25.350156117241703 22.786340914185036 43 23.85538212136455 25.826259425000064 25.81479174431242 24.503566709322964 44 23.58584614662867 26.583108212889005 25.253627012889527 24.577418627592795 45 23.87541358743033 26.588051933158795 25.377685630548978 24.158848848861894 46 23.624595047525716 26.262552549343603 25.24218959724984 24.870662805880837 47 23.96430889202228 26.104889217865885 25.638095188450823 24.292706701661015 48 24.745852386531123 26.82490431591581 24.29066068605847 24.1385826114946 49 23.848679923896896 27.129453465036878 24.645938127133885 24.37592848393234 50 23.80732085867425 27.166200354718523 24.48039991190679 24.546078874700438 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 106.0 1 76.0 2 46.0 3 156.0 4 266.0 5 313.5 6 361.0 7 364.5 8 368.0 9 474.5 10 581.0 11 899.0 12 1217.0 13 1968.0 14 2719.0 15 3768.0 16 4817.0 17 5242.5 18 5668.0 19 5786.5 20 5905.0 21 6245.5 22 6586.0 23 7184.5 24 7783.0 25 7086.0 26 6389.0 27 7114.5 28 7840.0 29 9097.0 30 10354.0 31 11848.5 32 13343.0 33 15890.0 34 18437.0 35 20802.0 36 23167.0 37 26129.0 38 29091.0 39 30249.0 40 31407.0 41 33915.5 42 36424.0 43 37287.5 44 38151.0 45 42385.0 46 46619.0 47 49890.5 48 53162.0 49 55320.5 50 57479.0 51 54916.5 52 52354.0 53 51846.0 54 51338.0 55 51865.0 56 52392.0 57 50903.0 58 49414.0 59 45445.0 60 41476.0 61 36524.0 62 31572.0 63 27764.5 64 23957.0 65 20678.5 66 17400.0 67 14840.5 68 12281.0 69 11201.0 70 10121.0 71 7897.0 72 5673.0 73 4941.0 74 4209.0 75 3308.5 76 2408.0 77 2080.5 78 1753.0 79 1442.0 80 1131.0 81 918.0 82 705.0 83 574.5 84 444.0 85 337.5 86 231.0 87 163.5 88 96.0 89 67.5 90 39.0 91 36.5 92 34.0 93 27.0 94 20.0 95 23.5 96 27.0 97 19.0 98 11.0 99 11.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007949094519946364 2 3.909390747514604E-4 3 3.909390747514604E-4 4 0.0 5 0.0 6 0.0 7 1.303130249171535E-4 8 0.0 9 0.0011728172242543814 10 3.909390747514604E-4 11 0.0 12 1.303130249171535E-4 13 3.909390747514604E-4 14 1.303130249171535E-4 15 0.004560955872100372 16 0.001042504199337228 17 0.0 18 3.909390747514604E-4 19 1.303130249171535E-4 20 5.21252099668614E-4 21 0.0 22 0.0 23 0.001042504199337228 24 5.21252099668614E-4 25 0.002085008398674456 26 0.0050822079717689865 27 0.006515651245857675 28 0.0039093907475146045 29 0.0023456344485087628 30 0.004170016797348912 31 0.007036903345526288 32 0.0039093907475146045 33 0.004560955872100372 34 0.0027365735232602233 35 0.002866886548177377 36 0.006906590320609135 37 0.0029971995730945305 38 0.007558155445194903 39 0.005342834021603293 40 0.002866886548177377 41 0.00260626049834307 42 0.0014334432740886886 43 0.0011728172242543814 44 0.002085008398674456 45 0.0015637562990058417 46 0.0011728172242543814 47 0.0027365735232602233 48 0.001824382348840149 49 3.909390747514604E-4 50 0.001824382348840149 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 767383.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.24555665237308 #Duplication Level Percentage of deduplicated Percentage of total 1 76.32449591236144 42.16589262890182 2 14.24133746371373 15.735412313143202 3 4.574120570570988 7.58099511348794 4 1.9480471769721606 4.304838027076439 5 0.925754681828419 2.5571916360575773 6 0.4870681506073753 1.6145010664767805 7 0.3085097414648248 1.1930654679932768 8 0.19047758727501776 0.8418432271047468 9 0.14152855652003432 0.7036941498440528 >10 0.6784686567488797 7.0878515924882075 >50 0.08285516683126018 3.2309168629948473 >100 0.08902713576860638 9.609807295395962 >500 0.00735957655591358 2.6928970025278844 >1k 9.49622781408204E-4 0.6810936165072717 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1918 0.2499403817911004 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 1180 0.15376936940224112 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1060 0.1381318064121827 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1035 0.13487398078925386 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 919 0.11975766989886405 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 881 0.11480577495201222 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 846 0.11024481907991185 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 826 0.10763855858156879 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 816 0.10633542833239724 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 809 0.10542323715797718 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 800 0.1042504199337228 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 769 0.10021071616129104 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 768 0.10008040313637387 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.60626049834307E-4 2 0.0 0.0 0.0 0.0 2.60626049834307E-4 3 0.0 0.0 0.0 0.0 2.60626049834307E-4 4 0.0 0.0 0.0 0.0 2.60626049834307E-4 5 0.0 0.0 0.0 0.0 2.60626049834307E-4 6 0.0 0.0 0.0 0.0 3.909390747514605E-4 7 0.0 0.0 0.0 0.0 3.909390747514605E-4 8 0.0 0.0 0.0 0.0 3.909390747514605E-4 9 0.0 0.0 0.0 0.0 3.909390747514605E-4 10 0.0 0.0 0.0 0.0 3.909390747514605E-4 11 0.0 0.0 0.0 0.0 3.909390747514605E-4 12 0.0 0.0 0.0 0.0 0.001303130249171535 13 0.0 0.0 0.0 0.0 0.0014334432740886883 14 0.0 0.0 0.0 0.0 0.0014334432740886883 15 0.0 0.0 0.0 1.303130249171535E-4 0.0023456344485087628 16 0.0 0.0 0.0 5.21252099668614E-4 0.0023456344485087628 17 0.0 0.0 0.0 6.515651245857675E-4 0.0024759474734259166 18 0.0 0.0 0.0 6.515651245857675E-4 0.0024759474734259166 19 0.0 0.0 0.0 7.81878149502921E-4 0.0024759474734259166 20 0.0 0.0 0.0 9.121911744200744E-4 0.00260626049834307 21 0.0 0.0 0.0 9.121911744200744E-4 0.00260626049834307 22 0.0 0.0 0.0 0.0022153214235916094 0.0027365735232602233 23 0.0 0.0 0.0 0.00521252099668614 0.0027365735232602233 24 0.0 0.0 0.0 0.008600659644532131 0.0027365735232602233 25 0.0 0.0 0.0 0.010164415943537973 0.0027365735232602233 26 0.0 0.0 0.0 0.012770676441881042 0.0029971995730945305 27 0.0 0.0 0.0 0.015767876014975573 0.003257825622928837 28 0.0 0.0 0.0 0.023195718435253324 0.003257825622928837 29 0.0 0.0 0.0 0.036357333951885826 0.003388138647845991 30 0.0 0.0 0.0 0.06541713850841105 0.003388138647845991 31 0.0 0.0 0.0 0.12210330434737282 0.0036487646976802977 32 0.0 0.0 0.0 0.18048353951025758 0.0036487646976802977 33 0.0 0.0 0.0 0.2331300015767876 0.0037790777225974515 34 0.0 0.0 0.0 0.29294368001376103 0.004170016797348912 35 0.0 0.0 0.0 0.36213989624476955 0.004170016797348912 36 0.0 0.0 0.0 0.4553137090605343 0.004170016797348912 37 0.0 0.0 0.0 0.5831507865042619 0.004170016797348912 38 0.0 0.0 0.0 0.7517758407470585 0.004170016797348912 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTAGG 80 3.6137626E-6 21.999249 2 CCGTCGT 185 0.0 21.403282 9 GTCCTAA 155 1.8189894E-12 21.289597 1 TCTAAGC 85 6.1138853E-6 20.703827 3 TGTACGT 75 5.4734766E-5 20.531296 5 ACCGTCG 185 0.0 20.21421 8 TTAACGG 55 0.0044779596 20.00323 35 TGACTCG 100 1.1234097E-6 19.798035 6 CGTCGTA 205 0.0 19.315157 10 GTCGTAG 195 0.0 19.177584 11 ATACCGT 195 0.0 19.177584 6 TACCGTC 195 0.0 19.177584 7 TACTAGA 70 8.121488E-4 18.856503 2 CGGACCG 105 1.7915318E-6 18.8565 21 CGGTGAC 105 1.7926486E-6 18.855272 3 CGCAATA 215 0.0 18.421577 36 CGTAAAC 60 0.0074027986 18.336294 32 GTATTAG 220 0.0 17.999386 1 GTGTAGG 160 1.1004886E-9 17.87439 1 GTCCTAT 235 0.0 17.786627 1 >>END_MODULE