FastQCFastQC Report
Thu 2 Feb 2017
SRR4063924_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4063924_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178
Sequences flagged as poor quality0
Sequence length25
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGCGGGCCCCTCGTCTCTCCAC21.1235955056179776No Hit
CAACGCAGAGTACATGGGCTTCTTT21.1235955056179776No Hit
CGTGTTTCACTTTGGTCGTGTCTCG10.5617977528089888No Hit
GCCCTTGCCCACATCACCATAGCCT10.5617977528089888No Hit
CCTTTACAAATTCAACAAAATGTTC10.5617977528089888No Hit
GAGTACTTTTTTTTTTTTTTTTTTT10.5617977528089888No Hit
AAGTGAGAAAGATCTTTGTAGGCAC10.5617977528089888No Hit
GATTATAATTTCATAGTTCATTGCA10.5617977528089888No Hit
CTGTTAAGAAGGATTCAACTGTATG10.5617977528089888No Hit
GAAGGGCACCACCAGGAGTGGAGCC10.5617977528089888No Hit
TTGTTACTGCTTTCTTTCTGGACAG10.5617977528089888No Hit
ACAGGGTACAGACAACTGTAATATC10.5617977528089888No Hit
GTATAGTTGATCTGCCAAAAAATAG10.5617977528089888No Hit
TCCTGCGACTGCCCAACAGACGTGT10.5617977528089888No Hit
ATATATGTGTGGTGTTGTGGCCAGA10.5617977528089888No Hit
CCATGAGACCACTTTCAACTCCATC10.5617977528089888No Hit
GGTAGCATGTCGGTAGTACTTGGTT10.5617977528089888No Hit
GCCCGGACACGGACAGGATTGACAG10.5617977528089888No Hit
GCTCAGGACCACTCAGTGGTGGCTC10.5617977528089888No Hit
TCTGTAAGGAGGTGTGAAAGCAGCA10.5617977528089888No Hit
GTTTTTTATTGGTGAAAACATGAAT10.5617977528089888No Hit
CCAGAAAGACACCCCAAAAACATGT10.5617977528089888No Hit
GATCTGCACGTCGCGGGATGGTGAC10.5617977528089888No Hit
CCGTTGTTGTTGTGGTCGCTTCGCC10.5617977528089888No Hit
AGGTCCCGCAGCGCGCGGTTGTCCG10.5617977528089888No Hit
GCCTTAAAGGACATTTTCGCATCAA10.5617977528089888No Hit
AACTTAAAGGAATTGACGGAAGGGC10.5617977528089888No Hit
CCCTCATCCTGCACGACGACGAGGT10.5617977528089888No Hit
CATTTGAACCCAGAACTCCAGATGA10.5617977528089888No Hit
GGACATCTAAGGGCATCACAGACCT10.5617977528089888No Hit
GTGATGGAGTCAGTAAGCATCTTGG10.5617977528089888No Hit
GGCAATCAGTAGAGTTGGTTTTTCA10.5617977528089888No Hit
GGATATCCCCCACATGGACATCGAG10.5617977528089888No Hit
GGTCCTTATGTGCGCCCTCATGTCA10.5617977528089888No Hit
GGTCCAGCGGGGGCTGGTGGGCGAG10.5617977528089888No Hit
GACGTGGGGTGTTACCAAGGCTGCA10.5617977528089888No Hit
CTCCAGGCCACCCGGGCTGAGGGCT10.5617977528089888No Hit
ATGCAAATCAAGAGGGTCAAACCCT10.5617977528089888No Hit
GTTGTGCCCTCACGTGTTTCACTTT10.5617977528089888No Hit
GGATGGTTTTGATCTGATAAATGCA10.5617977528089888No Hit
CCTCAGCGATGAGTGTAAAAGGCGC10.5617977528089888No Hit
GAACTACAGGACCGTCAGTGACCTC10.5617977528089888No Hit
GACCTGCAGAGGGTTCTCACCAGTG10.5617977528089888No Hit
ACATAGACGAGTTGATTCATAAAAT10.5617977528089888No Hit
CTGATGCGAAGCTGAGCCCTAGGCG10.5617977528089888No Hit
GTATGCAACGCCACCGGCCACATCC10.5617977528089888No Hit
GGCGTAGGGTAGGCACACGCTGAGC10.5617977528089888No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG10.5617977528089888No Hit
GCATCACTTCATACTCATCAGGATA10.5617977528089888No Hit
GCCCTCCAGGGAAATGACGGCGCTG10.5617977528089888No Hit
GACTATGAGTCGTATACATGGCGGA10.5617977528089888No Hit
CCATTTATTTCTCCCGGCTGGAAGG10.5617977528089888No Hit
GTATCAACGCAGAGTACATGGAGAC10.5617977528089888No Hit
GCAGCAGGTTAAATGATTTGTCCAA10.5617977528089888No Hit
GAGCGAGAGAGAGAGAGAGAGGGAG10.5617977528089888No Hit
GACAGATGCTGAGTCCTGGTGCCAA10.5617977528089888No Hit
CCTGGGGCCTGAGCCCCTTCAGTGG10.5617977528089888No Hit
GCTTCTATCTCCCAAGTGCTGGGAC10.5617977528089888No Hit
ATATAAAAGCAAGATGGGGTGACTT10.5617977528089888No Hit
TGTATCAGTAGAAGAGAACGTAATT10.5617977528089888No Hit
ACCCCCGAGCGGTCGGCGTCCCCCA10.5617977528089888No Hit
ACCATACTCCCCCCGGAACCCAAAG10.5617977528089888No Hit
CTTATGAAGTAGTATTTAACAGATG10.5617977528089888No Hit
GAGTCAGTCTATGTTTCATGTGTTC10.5617977528089888No Hit
CATCATGATCTTTATAATTTGAGAG10.5617977528089888No Hit
ATAACAAACTTATGCTTGTTGGTTT10.5617977528089888No Hit
CTTGGATAACTGTGGTAATTCTAGA10.5617977528089888No Hit
AGGGCGGACCTTGTGTTTATATTTA10.5617977528089888No Hit
CATTATTAGCGTGCTGTCTTTGTAC10.5617977528089888No Hit
AAATTAGAGGGTTCAAAGCAGGCCC10.5617977528089888No Hit
GTCCCAAGAAAGGTCACATCCATAG10.5617977528089888No Hit
CCGACGCGCGACTCCTCCGCCGGTA10.5617977528089888No Hit
TCCCCGCCCCTTGCCTCTCGGCGCC10.5617977528089888No Hit
CCTGTGCTCCAGTCAAGATCCACAG10.5617977528089888No Hit
GCGCAGCAGAGAGTGGATAGTTGCT10.5617977528089888No Hit
AGTGTGCATTTCTCATTTTTCACGT10.5617977528089888No Hit
GTCTTTGACAGTATGATTCTTTGAG10.5617977528089888No Hit
GTATCAAGAAAATCAAACACAAAGT10.5617977528089888No Hit
GCCTGGAAGAAGGAGGTCTTCTCGG10.5617977528089888No Hit
GGTAGCGCATGAGACACTGATGGAG10.5617977528089888No Hit
GGCTGTGTCTGTCTCTTTTGGAGAC10.5617977528089888No Hit
GCTGCCCCTCAGTGTCAGAGAGAAG10.5617977528089888No Hit
GACTTGCACTCAAATGGATCCTCGA10.5617977528089888No Hit
TCGTAGTTCCGACCATAAACGATGC10.5617977528089888No Hit
TTCGAATGGGTCGTCGCCGCCACGG10.5617977528089888No Hit
TGCCAAGGAAGACTGCCTCTCAGGA10.5617977528089888No Hit
GCCCGACACCGTGCCCGTGCCCACT10.5617977528089888No Hit
GGCTTCACTAAGAAACGCAACAACC10.5617977528089888No Hit
GGGTAACTGAGGGGTGTCAGGATGC10.5617977528089888No Hit
CCCTAACACCCGTGTTAGGCTTTGA10.5617977528089888No Hit
CCCCTTAATCAATCATTGCATATCC10.5617977528089888No Hit
GCATGTCTAAGTACGCACGGCCGGT10.5617977528089888No Hit
TTTTTGTACACATTCCGGATGGGCA10.5617977528089888No Hit
AGGCCACCCTGGTCTACATACAGAA10.5617977528089888No Hit
GTGTTAGGCCCTGTCTCGAAAACAA10.5617977528089888No Hit
CTTTTTAACTGCACCAACTTTAATA10.5617977528089888No Hit
CGCTTGACCATGTTCCCAGAGTCGG10.5617977528089888No Hit
GGTCAACCCCACAGTGTTCTTCGAC10.5617977528089888No Hit
GAACAATGCATCTACTGACTATGAC10.5617977528089888No Hit
GATCTCTACCATTTGATTAAGAAAG10.5617977528089888No Hit
GCTTTGAACACTCTAATTTTTTCAA10.5617977528089888No Hit
CACACCAACTGTCTCCAGCACTTTG10.5617977528089888No Hit
CCATGGTAGGCACGGCGACTACCAT10.5617977528089888No Hit
CTATTACAGTAATCTCATGACAAGG10.5617977528089888No Hit
TACCTGGACAATGCCGATGGAAGAT10.5617977528089888No Hit
AAGGAGAAGTGGCCACAGCCAAAGG10.5617977528089888No Hit
GTGTGCTTTCATGTTGCTGCTTTAT10.5617977528089888No Hit
TAGCATCACCGTGGAGGTCAACTTG10.5617977528089888No Hit
CTTTTATTTAGTGAGAACCACAGAC10.5617977528089888No Hit
CTTAAGTACTCCTGATCCTCCAAAA10.5617977528089888No Hit
TGTGAGGAAAGAGCTGGACCACAGA10.5617977528089888No Hit
GCCCCAGAGGAACCAGCTTATGCCA10.5617977528089888No Hit
TGCCTCAGCACCTCCAGGACCAACT10.5617977528089888No Hit
GGTATCTGATCGTCTTCGAACCTCC10.5617977528089888No Hit
CATCAATGCCTTGTGCTTCAGCCCC10.5617977528089888No Hit
GTGTGGGGTCCAGGAGTGTGTAGAC10.5617977528089888No Hit
CTTGTAGTTCTTGTCATCCGACAGG10.5617977528089888No Hit
GTACATGGGGCTCTCTATCTGCGGC10.5617977528089888No Hit
GACGAACTCCATGGGAATGATGCCG10.5617977528089888No Hit
GATAAATGCACGCATCCCCCCCCGG10.5617977528089888No Hit
GACCATGGATATTTAGCAACTTACA10.5617977528089888No Hit
TATCAACGCAGAGTACATGGGGTAG10.5617977528089888No Hit
AGTTATAGGTGGATTATTTATAGTG10.5617977528089888No Hit
TGAAGGCAAGATGGGTCACCAGCAG10.5617977528089888No Hit
GTGTAAATGTATGTGGTAAAAGGCC10.5617977528089888No Hit
ATACGCTATTGGAGCTGGAATTACC10.5617977528089888No Hit
AATCAGACCAGAGCTGCCGATGGAG10.5617977528089888No Hit
GTCCGAGGAGGACGCCGCCGAGCGC10.5617977528089888No Hit
GCGGAAGGCTGCTTCCCTCAAGAGT10.5617977528089888No Hit
TCCCAAGAGTCCAGGTGGCGCAGAT10.5617977528089888No Hit
GTACATGGGCTCTTCCTGTCTGTAT10.5617977528089888No Hit
GGATACTGTTTTTGTCACCCTGATC10.5617977528089888No Hit
CCATAGCCTGGTAGAGGATTTCAGA10.5617977528089888No Hit
GGATATATAGTGTGACCCGGGAAAA10.5617977528089888No Hit
GAAGTGGGCAAGTGAGCTTTTTAGT10.5617977528089888No Hit
GCCCCATTGCTCTTGGAATCGATAG10.5617977528089888No Hit
GTACTACACGCGTCTGGGTAATGAC10.5617977528089888No Hit
TTGCTAGTGTTATCCTCTTTGGAAC10.5617977528089888No Hit
CCCACGTTGTCTGCTCCCACAATGA10.5617977528089888No Hit
CACACACACACACACACACACACCT10.5617977528089888No Hit
CTGCAGACCCAGTGGAAGTTTGCCT10.5617977528089888No Hit
CTCCAGAGGGGAACTAAGAAGTTTA10.5617977528089888No Hit
GATATAAAGAACCTACAAGAGTTGG10.5617977528089888No Hit
CTGCAGGGCGCTCCCCGGCCTCGGC10.5617977528089888No Hit
GCCTTTCTTGGCAGTTTTTGTTAAA10.5617977528089888No Hit
CTCCTCTTTTGCTCCGGATTTCCGA10.5617977528089888No Hit
ACCTTGAGGAGCCCATGGTCCTGCA10.5617977528089888No Hit
GCAGGGAGTTACATTAGCTCCTTAA10.5617977528089888No Hit
ATGATGTCCCCACCATCTAAAGTGT10.5617977528089888No Hit
GGATAGCATGGCTTGCCCCAGCTCA10.5617977528089888No Hit
ATGTTCTACAGTGTAGTTTTTATCA10.5617977528089888No Hit
CAGAAAGGGAGATGTGTGAGCAGAG10.5617977528089888No Hit
ATACAGGACTCTTTCGAGGCCCTGT10.5617977528089888No Hit
TCTCCGGCCCGAGCGCTGCCCCGCG10.5617977528089888No Hit
GTGCCATCCTGGGAAGGCCTTCCTT10.5617977528089888No Hit
GCTTTGCCTAAGTCTAGTGCTGGAT10.5617977528089888No Hit
GCTCCAATAGCGTATATTAAAGTTG10.5617977528089888No Hit
GATCAAAACCAACCCGGTGAGCTCC10.5617977528089888No Hit
CCCCGTCACCCGTGGTCACCATGGT10.5617977528089888No Hit
GCTGTGGCCACTGCAAAATACTGGC10.5617977528089888No Hit
CCACATATGAATGAGAATGTGGTAT10.5617977528089888No Hit
AGTAGATCCTGGGCAAAATGGTATC10.5617977528089888No Hit
GAGGAGGCGCTCATCGTCCCTCCGG10.5617977528089888No Hit
GAACACATCTGCAAGTACAATGTCT10.5617977528089888No Hit
GGCTGACACTTGGGGGCCAGAAATG10.5617977528089888No Hit
GGACAGAGTTGTCCTGGGGACATTG10.5617977528089888No Hit
CCTTAATGTGTACATCATTAAGAGG10.5617977528089888No Hit
CCGTGGCTGCCCTGGCCACGGAAGG10.5617977528089888No Hit
GTACATGGGTACCTGGTTGATCCTG10.5617977528089888No Hit
AGCAATGACTTACCAATCAAGGCTC10.5617977528089888No Hit
GTCTGCGGCAACAGGAAGGTTCTCT10.5617977528089888No Hit
GCCCTGCAGAGACATGAAGTGCCAG10.5617977528089888No Hit
GACGTCAGCAGGATTCTCGATGGCA10.5617977528089888No Hit
GAGTTACACTGAAAAACACATTCGT10.5617977528089888No Hit
GACACACACAACTCCTCGGAAATGA10.5617977528089888No Hit
ATGCATGTCTAAGTACGCACGGCCG10.5617977528089888No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers