##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063923_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4896322 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.312939590165843 32.0 32.0 32.0 32.0 32.0 2 30.918587257945862 32.0 32.0 32.0 32.0 32.0 3 30.935839391281863 32.0 32.0 32.0 32.0 32.0 4 30.970611205717272 32.0 32.0 32.0 32.0 32.0 5 30.877948795034314 32.0 32.0 32.0 32.0 32.0 6 34.549539634035504 36.0 36.0 36.0 32.0 36.0 7 34.503302887350955 36.0 36.0 36.0 32.0 36.0 8 34.46280943124247 36.0 36.0 36.0 32.0 36.0 9 34.60807561267416 36.0 36.0 36.0 32.0 36.0 10 34.30431822090132 36.0 36.0 36.0 32.0 36.0 11 34.57109091273001 36.0 36.0 36.0 32.0 36.0 12 34.38990062336587 36.0 36.0 36.0 32.0 36.0 13 34.47076662850196 36.0 36.0 36.0 32.0 36.0 14 34.36989826241003 36.0 36.0 36.0 32.0 36.0 15 34.30391567384661 36.0 36.0 36.0 32.0 36.0 16 34.30825832124603 36.0 36.0 36.0 32.0 36.0 17 34.23221369019439 36.0 36.0 36.0 32.0 36.0 18 34.22511039919352 36.0 36.0 36.0 32.0 36.0 19 34.250736573289096 36.0 36.0 36.0 32.0 36.0 20 34.233896790284625 36.0 36.0 36.0 32.0 36.0 21 34.216398145383415 36.0 36.0 36.0 32.0 36.0 22 34.203387971624416 36.0 36.0 36.0 32.0 36.0 23 34.14121436457815 36.0 36.0 36.0 32.0 36.0 24 34.1238125270356 36.0 36.0 36.0 32.0 36.0 25 33.72963093522036 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 15.0 4 44.0 5 66.0 6 205.0 7 76.0 8 265.0 9 342.0 10 449.0 11 117.0 12 326.0 13 241.0 14 380.0 15 676.0 16 1283.0 17 1604.0 18 2122.0 19 2827.0 20 4327.0 21 6432.0 22 10231.0 23 15802.0 24 23638.0 25 35290.0 26 50083.0 27 66972.0 28 91472.0 29 124456.0 30 163802.0 31 223362.0 32 318407.0 33 454700.0 34 998580.0 35 2297729.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.93016294876085 16.584736665534766 10.982359101851046 26.502741283853332 2 17.348561069233952 19.003787939133172 36.53996902819529 27.107681963437585 3 18.964665073060264 22.677254672572705 28.39616260013823 29.961917654228802 4 12.879683145150386 14.986125754219358 35.05782739890877 37.07636370172149 5 15.049467497004091 35.83615154168609 33.55997468055028 15.554406280759526 6 35.458574796264216 34.76972244299514 16.23029205958969 13.541410701150955 7 31.18045698904962 29.97702634350744 20.26656060297779 18.575956064465153 8 28.65706356159368 32.553721216836436 18.820977221909853 19.96823799966003 9 27.387998415149507 14.040659711388018 18.02183031433209 40.549511559130394 10 15.774771768324694 26.327471199372702 31.507343692492494 26.39041333981011 11 37.69255903951853 20.752451810302745 22.10098068325163 19.4540084669271 12 24.917062679217267 23.275299178259907 28.289346358064016 23.518291784458814 13 29.561894843072285 19.04505759088045 24.963432820721803 26.42961474532546 14 23.825084724701433 19.121172571065127 24.71155178538071 32.34219091885272 15 25.578312369094846 26.76899364911401 21.714442896079216 25.938251085711926 16 26.312318336752515 25.414849267788025 23.017824304279067 25.255008091180386 17 24.601464084558852 25.654219359268858 24.545406240548033 25.198910315624257 18 25.293321696260122 24.737910355019306 25.245185910420425 24.723582038300144 19 25.86085248882392 24.639393597504146 24.84871004980591 24.651043863866022 20 26.101987104749792 24.145542504778895 24.28989049012089 25.462579900350423 21 26.97138052230588 23.995403682123168 24.13743415582515 24.895781639745802 22 26.327025963607003 23.775285262420986 24.464330061268186 25.433358712703825 23 25.004548005888495 23.80757417746503 24.991323017979035 26.196554798667442 24 25.173585384632837 24.49870200584603 24.61673863664932 25.71097397287181 25 25.269896554472933 24.107508947496438 24.801785615736964 25.820808882293665 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 201.0 1 201.0 2 557.5 3 914.0 4 914.0 5 914.0 6 2542.0 7 4170.0 8 4170.0 9 4170.0 10 5189.5 11 6209.0 12 6209.0 13 6209.0 14 8679.5 15 11150.0 16 11150.0 17 11150.0 18 19066.0 19 26982.0 20 26982.0 21 26982.0 22 42011.0 23 57040.0 24 57040.0 25 57040.0 26 84987.0 27 112934.0 28 112934.0 29 112934.0 30 144627.5 31 176321.0 32 176321.0 33 176321.0 34 225979.0 35 275637.0 36 275637.0 37 275637.0 38 325691.0 39 375745.0 40 375745.0 41 375745.0 42 437380.0 43 499015.0 44 499015.0 45 499015.0 46 563494.0 47 627973.0 48 627973.0 49 627973.0 50 651954.5 51 675936.0 52 675936.0 53 675936.0 54 645291.0 55 614646.0 56 614646.0 57 614646.0 58 569657.0 59 524668.0 60 524668.0 61 524668.0 62 460152.0 63 395636.0 64 395636.0 65 395636.0 66 323737.5 67 251839.0 68 251839.0 69 251839.0 70 190072.0 71 128305.0 72 128305.0 73 128305.0 74 97242.5 75 66180.0 76 66180.0 77 66180.0 78 51735.5 79 37291.0 80 37291.0 81 37291.0 82 25569.5 83 13848.0 84 13848.0 85 13848.0 86 10482.5 87 7117.0 88 7117.0 89 7117.0 90 5045.5 91 2974.0 92 2974.0 93 2974.0 94 2060.0 95 1146.0 96 1146.0 97 1146.0 98 1795.5 99 2445.0 100 2445.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038804637440103 2 0.005228414307719141 3 0.0018381144050575104 4 0.004084698677905578 5 0.009823700320362918 6 0.013132306249466437 7 0.02348701739795708 8 0.03663974714081304 9 0.05075238107297682 10 0.060024647071822486 11 0.055000467697998615 12 0.0647220505514139 13 0.0668460938639248 14 0.06976665341862728 15 0.06104582174129888 16 0.06821446792102316 17 0.06457908609768721 18 0.07989670613983313 19 0.07617963034293905 20 0.08124465670354197 21 0.0757711604751485 22 0.0795903537389902 23 0.08308277110859948 24 0.07705784055868875 25 0.07948823627204256 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 4896322.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.9209413313136 #Duplication Level Percentage of deduplicated Percentage of total 1 68.52834327994167 26.671876283307284 2 15.408859308993225 11.994546182955814 3 6.04528096125387 7.058640768728069 4 3.0152656323662375 4.694279071026101 5 1.6474232045113213 3.205963094531489 6 1.092549034510547 2.551382212426099 7 0.7350931871496751 2.0027363167070584 8 0.5054944945849109 1.5739457253633071 9 0.3943759541265903 1.381453503573766 >10 2.333865134615177 16.68586503705769 >50 0.17310558464058826 4.644197941100264 >100 0.09818427184380973 7.39231803196785 >500 0.012873877349953166 3.474895273976813 >1k 0.00918055054312335 6.395601374981295 >5k 1.0552356946117763E-4 0.27229918229739397 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 8168 0.16681909400566383 No Hit TATCAACGCAGAGTACTTTTTTTTT 5092 0.10399642833947603 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 2.0423493389527894E-5 10 0.0 0.0 0.0 0.0 2.0423493389527894E-5 11 0.0 0.0 0.0 0.0 2.0423493389527894E-5 12 0.0 0.0 0.0 2.0423493389527894E-5 8.169397355811157E-5 13 0.0 0.0 0.0 2.0423493389527894E-5 1.0211746694763947E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1800 0.0 13.720075 1 GTATCAA 5310 0.0 13.147659 1 ACGGTAT 605 0.0 11.463944 9 CAAGACG 945 0.0 11.357314 4 CGAACGA 475 0.0 11.001652 16 TAACGAA 490 0.0 10.857219 13 ATAACGA 525 0.0 10.857219 12 TACGGGT 105 3.4796467E-6 10.854778 4 CGGTCCA 860 0.0 10.826099 10 GTCCTAT 885 0.0 10.732783 1 CGCATCG 510 0.0 10.617722 13 CGAGCCG 870 0.0 10.593544 15 AAGACGG 1005 0.0 10.58584 5 AGGCCCG 900 0.0 10.556061 10 TCGGCGT 540 0.0 10.55563 13 TAAGGCG 135 5.7070793E-8 10.554335 5 ACCGTCG 685 0.0 10.541081 8 GATAACG 525 0.0 10.495204 11 GTATAAT 355 0.0 10.434987 1 AATTCCG 575 0.0 10.407493 5 >>END_MODULE