##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063922_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2114358 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290948836478968 32.0 32.0 32.0 32.0 32.0 2 31.425833751900104 32.0 32.0 32.0 32.0 32.0 3 31.50177642575193 32.0 32.0 32.0 32.0 32.0 4 31.58665278065493 32.0 32.0 32.0 32.0 32.0 5 31.539193930261572 32.0 32.0 32.0 32.0 32.0 6 35.1391405807342 36.0 36.0 36.0 36.0 36.0 7 35.15344374036942 36.0 36.0 36.0 36.0 36.0 8 35.10021765472072 36.0 36.0 36.0 36.0 36.0 9 35.20389262367111 36.0 36.0 36.0 36.0 36.0 10 35.067017506023106 36.0 36.0 36.0 36.0 36.0 11 35.20564445566929 36.0 36.0 36.0 36.0 36.0 12 35.11505147188887 36.0 36.0 36.0 36.0 36.0 13 35.158810854169445 36.0 36.0 36.0 36.0 36.0 14 35.0994155199829 36.0 36.0 36.0 36.0 36.0 15 35.07838123912791 36.0 36.0 36.0 36.0 36.0 16 35.084993175233336 36.0 36.0 36.0 36.0 36.0 17 35.05611206806038 36.0 36.0 36.0 36.0 36.0 18 35.05039449326935 36.0 36.0 36.0 36.0 36.0 19 35.04610761280729 36.0 36.0 36.0 36.0 36.0 20 35.03160439244442 36.0 36.0 36.0 36.0 36.0 21 35.02214714821236 36.0 36.0 36.0 36.0 36.0 22 34.99911462486485 36.0 36.0 36.0 36.0 36.0 23 34.95935078165571 36.0 36.0 36.0 36.0 36.0 24 34.93250528056271 36.0 36.0 36.0 36.0 36.0 25 34.89780491288609 36.0 36.0 36.0 32.0 36.0 26 34.84607431664836 36.0 36.0 36.0 32.0 36.0 27 34.83233681334949 36.0 36.0 36.0 32.0 36.0 28 34.791502195938435 36.0 36.0 36.0 32.0 36.0 29 34.766370690299375 36.0 36.0 36.0 32.0 36.0 30 34.72589079049054 36.0 36.0 36.0 32.0 36.0 31 34.72766958102649 36.0 36.0 36.0 32.0 36.0 32 34.683635883800186 36.0 36.0 36.0 32.0 36.0 33 34.67180250459005 36.0 36.0 36.0 32.0 36.0 34 34.65579670046416 36.0 36.0 36.0 32.0 36.0 35 34.625008631461654 36.0 36.0 36.0 32.0 36.0 36 34.57830651195304 36.0 36.0 36.0 32.0 36.0 37 34.54987045713167 36.0 36.0 36.0 32.0 36.0 38 34.49558589415794 36.0 36.0 36.0 32.0 36.0 39 34.461982313307395 36.0 36.0 36.0 32.0 36.0 40 34.46413190197686 36.0 36.0 36.0 32.0 36.0 41 34.4523912223001 36.0 36.0 36.0 32.0 36.0 42 34.38148884909746 36.0 36.0 36.0 32.0 36.0 43 34.37800504928683 36.0 36.0 36.0 32.0 36.0 44 34.291447805906095 36.0 36.0 36.0 32.0 36.0 45 34.257275258021586 36.0 36.0 36.0 32.0 36.0 46 34.18216356927256 36.0 36.0 36.0 32.0 36.0 47 34.16287497197731 36.0 36.0 36.0 32.0 36.0 48 34.1016351062592 36.0 36.0 36.0 32.0 36.0 49 34.076236380026465 36.0 36.0 36.0 32.0 36.0 50 33.504988275400855 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 0.0 19 5.0 20 30.0 21 64.0 22 219.0 23 662.0 24 1771.0 25 4137.0 26 8180.0 27 15186.0 28 24845.0 29 37727.0 30 53682.0 31 75393.0 32 108363.0 33 174875.0 34 359918.0 35 1249298.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.51909312617186 18.13648326241484 12.02182044533915 26.322603166074153 2 15.122297748525787 20.39399379856107 39.394650265708385 25.089058187204756 3 19.01370347633367 24.273087666492934 28.809177649532668 27.904031207640728 4 12.007048948191366 16.272409875716413 36.48213784042248 35.23840333566974 5 13.546523341837096 37.57239786261361 33.88678738416105 14.994291411388232 6 33.55816176390603 36.297723227862136 16.945041816574623 13.199073191657213 7 29.66001451979445 30.50504763864157 20.640147941097876 19.1947899004661 8 26.995570286583447 35.334981114834854 19.163925881993492 18.505522716588203 9 27.282229503730722 14.156217365641034 18.50022891347449 40.061324217153754 10 15.876640406292463 27.3030956719807 31.79121228904163 25.0290516326852 11 37.21353584091996 20.61264961404342 23.50009955745411 18.673714987582514 12 25.136755718295046 23.26691746036851 29.916371619889574 21.67995520144687 13 30.221827458703544 19.797327400529525 25.518812909523795 24.462032231243136 14 22.813445619796873 20.714459357326163 25.404118704814806 31.06797631806216 15 24.323664711374466 29.558919377068687 22.23787780322401 23.879538108332838 16 24.451295012821955 25.901249655921323 26.057846838401733 23.58960849285499 17 22.874934140765188 26.73005233739982 26.327329619676515 24.06768390215848 18 23.508276069844666 25.35877473397249 28.64687901571595 22.486070180466896 19 25.64545688874385 24.29691324304575 25.662294174819273 24.39533569339113 20 25.456336687890012 25.28271260318833 26.010127046858166 23.250823662063492 21 26.095675377585064 24.182754292319466 24.894979941901987 24.826590388193484 22 25.269159971168527 25.66171448895077 25.609594599963298 23.459530939917403 23 23.72025774570881 25.434085091650697 26.267729003770455 24.577928158870037 24 24.75783326215303 25.155449738903084 26.450269089918454 23.636447909025428 25 24.398443556210143 25.212894816126514 26.661832931546837 23.726828696116506 26 22.970250105712445 26.516938113522396 27.351995482034557 23.160816298730598 27 23.806422317767087 25.64911384501866 26.631097488872808 23.913366348341444 28 23.11043926729504 26.26834694889152 26.137993272312425 24.483220511501017 29 23.60201296889263 25.00503715195172 25.91484611855516 25.478103760600483 30 23.11764282984528 25.87936038262015 26.526961628254558 24.476035159280013 31 24.730700646583326 24.924249949153104 25.78420104153364 24.560848362729935 32 23.879557881961542 26.14099287841659 25.69341670935265 24.286032530269214 33 23.410506739291556 25.68470133281747 26.82004859422498 24.084743333665998 34 24.231038462266113 25.914826796829182 26.698497833777928 23.155636907126777 35 24.233804636854757 26.00192595297307 26.671327044031106 23.092942366141063 36 23.04095370713729 26.241514488750312 26.567691108470754 24.149840695641643 37 24.05100590512542 25.830678746514746 25.686940851785373 24.43137449657446 38 23.99384158397109 26.305234180627952 25.646491784048663 24.054432451352298 39 24.964845606824184 24.984805450645503 25.702271969426437 24.348076973103876 40 25.747368142247552 25.42219926727037 25.947908655688018 22.882523934794065 41 24.26777154235633 24.94862280745318 27.47460701473089 23.308998635459606 42 24.944166181874937 26.690456933940627 26.018417356016855 22.34695952816758 43 23.481500470126623 25.91201726887648 26.856905564142487 23.749576696854408 44 23.053202025428533 26.51233163601691 25.891847867728508 24.542618470826053 45 23.25703156186091 26.6424635013366 25.995211708328526 24.105293228473972 46 23.54474970049571 25.230203275084694 25.868893506065998 25.356153518353597 47 24.651443274101474 25.528900954930496 26.02802832156421 23.79162744940382 48 24.243057736475876 25.85267152754392 25.08466175029419 24.819608985686013 49 24.220870188701376 26.000853218914976 25.576466671017894 24.201809921365754 50 23.768049453018214 27.00444112319269 24.907795850222055 24.31971357356704 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 92.0 1 85.5 2 79.0 3 198.0 4 317.0 5 350.5 6 384.0 7 364.5 8 345.0 9 472.5 10 600.0 11 959.5 12 1319.0 13 2503.0 14 3687.0 15 4881.5 16 6076.0 17 6593.5 18 7111.0 19 7201.5 20 7292.0 21 7913.5 22 8535.0 23 9669.5 24 10804.0 25 12927.0 26 15050.0 27 21399.0 28 27748.0 29 34303.5 30 40859.0 31 46942.5 32 53026.0 33 63909.0 34 74792.0 35 87799.5 36 100807.0 37 106001.5 38 111196.0 39 110170.0 40 109144.0 41 108467.0 42 107790.0 43 107012.5 44 106235.0 45 113701.0 46 121167.0 47 127715.5 48 134264.0 49 139582.5 50 144901.0 51 140863.5 52 136826.0 53 135638.5 54 134451.0 55 134537.0 56 134623.0 57 130584.5 58 126546.0 59 115976.5 60 105407.0 61 93306.0 62 81205.0 63 70975.0 64 60745.0 65 51888.0 66 43031.0 67 37526.5 68 32022.0 69 29204.0 70 26386.0 71 20368.0 72 14350.0 73 12045.0 74 9740.0 75 7673.0 76 5606.0 77 4832.0 78 4058.0 79 3259.0 80 2460.0 81 1979.0 82 1498.0 83 1197.0 84 896.0 85 651.5 86 407.0 87 299.5 88 192.0 89 145.5 90 99.0 91 80.0 92 61.0 93 52.5 94 44.0 95 39.5 96 35.0 97 33.0 98 31.0 99 25.0 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009175361977489149 2 4.729568029633581E-4 3 1.8918272118534328E-4 4 0.0 5 0.0 6 2.3647840148167905E-4 7 1.4188704088900745E-4 8 0.0 9 0.001040504966519388 10 8.986179256303804E-4 11 4.729568029633582E-5 12 1.8918272118534328E-4 13 5.675481635560298E-4 14 1.8918272118534328E-4 15 0.004540385308448238 16 7.567308847413731E-4 17 0.0 18 4.256611226670223E-4 19 1.4188704088900745E-4 20 9.459136059267162E-4 21 0.0 22 9.459136059267164E-5 23 0.0012296876877047312 24 4.256611226670223E-4 25 0.0024120796951131265 26 0.0062430297991163276 27 0.007945674289784417 28 0.005202524832596939 29 0.0032161062601508356 30 0.004445793947855567 31 0.007945674289784417 32 0.003830950104003201 33 0.005439003234078619 34 0.0036890630631141934 35 0.0037836544237068647 36 0.007851082929191745 37 0.004398498267559231 38 0.008418631092747774 39 0.005344411873485947 40 0.0034052889813361784 41 0.004398498267559231 42 0.002270192654224119 43 0.0016080531300754178 44 0.0018918272118534324 45 0.0016080531300754178 46 0.00146616608918641 47 0.0032161062601508356 48 0.00293233217837282 49 5.675481635560298E-4 50 0.0013242790482974028 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2114358.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.10166381733149 #Duplication Level Percentage of deduplicated Percentage of total 1 74.34243885524563 36.50337440030793 2 14.224784916047295 13.969212136432043 3 4.837524158818932 7.125914548636396 4 2.146728371850112 4.216317392868463 5 1.1650923483541982 2.8603986402516557 6 0.6989479934834631 2.0591705641094045 7 0.4682336006665907 1.6093734193536706 8 0.33058736911135594 1.2985911888289503 9 0.24009267798377984 1.0610054963426145 >10 1.3489500529676723 12.012010678999735 >50 0.10534191012584086 3.6050939464845713 >100 0.07872694395593004 8.098802086918312 >500 0.008659080028208628 2.957404291184373 >1k 0.0038917213609926398 2.6233312092819343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 4.729568029633581E-5 13 0.0 0.0 0.0 0.0 4.729568029633581E-5 14 0.0 0.0 0.0 0.0 4.729568029633581E-5 15 0.0 0.0 0.0 0.0 4.729568029633581E-5 16 0.0 0.0 0.0 0.0 4.729568029633581E-5 17 0.0 0.0 0.0 0.0 4.729568029633581E-5 18 0.0 0.0 0.0 0.0 4.729568029633581E-5 19 0.0 0.0 0.0 0.0 4.729568029633581E-5 20 0.0 0.0 0.0 4.729568029633581E-5 4.729568029633581E-5 21 0.0 0.0 0.0 9.459136059267162E-5 4.729568029633581E-5 22 0.0 0.0 0.0 3.310697620743507E-4 4.729568029633581E-5 23 0.0 0.0 0.0 9.93209286223052E-4 4.729568029633581E-5 24 0.0 0.0 0.0 0.002081009933038776 4.729568029633581E-5 25 0.0 0.0 0.0 0.0025066710557057983 4.729568029633581E-5 26 0.0 0.0 0.0 0.0028850364980764847 9.459136059267162E-5 27 0.0 0.0 0.0 0.003878245784299537 9.459136059267162E-5 28 0.0 0.0 0.0 0.006195734118819992 9.459136059267162E-5 29 0.0 0.0 0.0 0.012817129360307006 9.459136059267162E-5 30 0.0 0.0 0.0 0.023931614229945924 9.459136059267162E-5 31 0.0 0.0 0.0 0.04970775999144894 9.459136059267162E-5 32 0.0 0.0 0.0 0.07775409840717608 9.459136059267162E-5 33 0.0 0.0 0.0 0.10291540032482674 9.459136059267162E-5 34 0.0 0.0 0.0 0.1315292869041099 1.4188704088900745E-4 35 0.0 0.0 0.0 0.16804155209288116 1.4188704088900745E-4 36 0.0 0.0 0.0 0.2175128336828484 1.4188704088900745E-4 37 0.0 0.0 0.0 0.29398994872202344 1.4188704088900745E-4 38 0.0 0.0 0.0 0.39293251190195794 1.4188704088900745E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGAT 60 2.871748E-4 22.002283 21 TGTAGGA 2655 0.0 21.540888 2 GTAGGAC 2745 0.0 20.754494 3 CTGTAGG 2850 0.0 20.146599 1 GTATCAA 4480 0.0 20.13316 1 GTCCTAC 2410 0.0 19.260675 1 GATATAC 1825 0.0 19.166391 1 TTAACGG 185 1.8189894E-12 19.029001 35 TAGGACC 1800 0.0 18.575312 4 GTCCTAA 1380 0.0 18.492048 1 ATACACT 1845 0.0 18.47993 4 ACTGTTC 1755 0.0 18.424906 8 CGGATAC 60 0.0074104685 18.3348 25 TAGCGAT 60 0.007413502 18.333502 38 TAGGACG 2600 0.0 18.274496 4 TTAGGAC 1575 0.0 17.876568 3 TCCTACA 2675 0.0 17.597246 2 TGGCGAG 3175 0.0 17.46075 18 AGGACGT 2670 0.0 17.383461 5 TAGGACA 1015 0.0 17.337599 4 >>END_MODULE