##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063920_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2198529 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.360875385314454 32.0 32.0 32.0 32.0 32.0 2 31.43337067648414 32.0 32.0 32.0 32.0 32.0 3 31.492952787977778 32.0 32.0 32.0 32.0 32.0 4 31.571359759184435 32.0 32.0 32.0 32.0 32.0 5 31.52884587831227 32.0 32.0 32.0 32.0 32.0 6 35.11989107262174 36.0 36.0 36.0 36.0 36.0 7 35.13797134356654 36.0 36.0 36.0 36.0 36.0 8 35.084162182986894 36.0 36.0 36.0 36.0 36.0 9 35.189972477051704 36.0 36.0 36.0 36.0 36.0 10 35.048912704813084 36.0 36.0 36.0 36.0 36.0 11 35.190734350104094 36.0 36.0 36.0 36.0 36.0 12 35.091736793101205 36.0 36.0 36.0 36.0 36.0 13 35.1363993834059 36.0 36.0 36.0 36.0 36.0 14 35.08673708647919 36.0 36.0 36.0 36.0 36.0 15 35.057200973923926 36.0 36.0 36.0 36.0 36.0 16 35.072022702452415 36.0 36.0 36.0 36.0 36.0 17 35.046673935163014 36.0 36.0 36.0 36.0 36.0 18 35.03621330444129 36.0 36.0 36.0 36.0 36.0 19 35.02800235975964 36.0 36.0 36.0 36.0 36.0 20 35.02383320847712 36.0 36.0 36.0 36.0 36.0 21 35.01992423115638 36.0 36.0 36.0 36.0 36.0 22 34.99625203943182 36.0 36.0 36.0 36.0 36.0 23 34.95204520840981 36.0 36.0 36.0 36.0 36.0 24 34.92809373904097 36.0 36.0 36.0 36.0 36.0 25 34.90016188096677 36.0 36.0 36.0 32.0 36.0 26 34.84846140305632 36.0 36.0 36.0 32.0 36.0 27 34.8311543764035 36.0 36.0 36.0 32.0 36.0 28 34.80479766243702 36.0 36.0 36.0 32.0 36.0 29 34.77917052720251 36.0 36.0 36.0 32.0 36.0 30 34.75862269726713 36.0 36.0 36.0 32.0 36.0 31 34.74938879587215 36.0 36.0 36.0 32.0 36.0 32 34.71197923702621 36.0 36.0 36.0 32.0 36.0 33 34.698877294773006 36.0 36.0 36.0 32.0 36.0 34 34.684339392384636 36.0 36.0 36.0 32.0 36.0 35 34.648685098081486 36.0 36.0 36.0 32.0 36.0 36 34.62359650475386 36.0 36.0 36.0 32.0 36.0 37 34.60201252746723 36.0 36.0 36.0 32.0 36.0 38 34.561827476462675 36.0 36.0 36.0 32.0 36.0 39 34.543157720457636 36.0 36.0 36.0 32.0 36.0 40 34.53564860868335 36.0 36.0 36.0 32.0 36.0 41 34.51510032389839 36.0 36.0 36.0 32.0 36.0 42 34.462470133439226 36.0 36.0 36.0 32.0 36.0 43 34.448701836546164 36.0 36.0 36.0 32.0 36.0 44 34.38477363728202 36.0 36.0 36.0 32.0 36.0 45 34.35674489624654 36.0 36.0 36.0 32.0 36.0 46 34.3145530488795 36.0 36.0 36.0 32.0 36.0 47 34.28574696990579 36.0 36.0 36.0 32.0 36.0 48 34.24206958379899 36.0 36.0 36.0 32.0 36.0 49 34.22023180044475 36.0 36.0 36.0 32.0 36.0 50 33.634524265997854 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 1.0 19 7.0 20 17.0 21 58.0 22 195.0 23 590.0 24 1510.0 25 3546.0 26 7441.0 27 13821.0 28 24000.0 29 36697.0 30 54371.0 31 78155.0 32 113829.0 33 183214.0 34 380735.0 35 1300339.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.13572078081878 18.225276217396704 12.146287298844275 26.492715702940238 2 15.333413083989722 20.489202049197665 38.48590801353093 25.691476853281685 3 18.236888236733588 24.596251481677236 28.970053517772392 28.196806763816785 4 12.203614325760542 16.442721474222083 36.37923356935478 34.974430630662596 5 13.939183881586278 37.231576203907245 33.719455144780895 15.109784769725575 6 33.652198633174514 36.115622974494265 17.05147769527297 13.180700697058256 7 29.89515252712384 30.50483346349624 20.992782895092944 18.607231114286975 8 27.36579776750727 34.31317030614561 19.367813660861422 18.953218265485695 9 27.601753560840177 14.088618684210767 18.53765616343522 39.77197159151385 10 15.86109431935152 26.966398438207158 31.923234897991765 25.24927234444955 11 36.82524708588978 20.737111711614183 23.606623889540586 18.83101731295545 12 25.315188448988096 23.277459534251584 29.48561900109437 21.92173301566595 13 29.873828929695073 19.972272293717193 25.244584659792054 24.909314116795684 14 23.271000661352197 20.406354075412345 25.378230687287758 30.944414575947704 15 24.565600272193507 28.801975586280427 22.170488474533716 24.461935666992353 16 24.87708760041428 25.83268630626918 25.156366769053868 24.133859324262673 17 23.452726800510707 26.50040094990787 25.85665233435629 24.190219915225132 18 24.12325189377227 25.075209618097976 27.66340295889693 23.13813552923282 19 25.717207149510944 24.578490699231487 25.538269241965533 24.166032909292035 20 25.959451831481257 24.77742991765828 25.41877016412397 23.844348086736492 21 26.33447182184088 24.222559720613194 24.636836721280456 24.806131736265478 22 25.83297817129378 25.123002810518138 25.11981886053708 23.92420015765101 23 24.03939748448499 25.036888519346682 25.90665703592787 25.017056960240453 24 25.01826233537744 24.961041867370415 25.844866123208675 24.175829674043467 25 24.681555606095067 24.97634750966568 26.049078917443712 24.293017966795542 26 23.810600340244356 26.03169549039765 26.467872381073683 23.689831788284312 27 24.470141710994 25.47017901054304 25.62883855572507 24.430840722737894 28 23.978020928333763 25.42535553377258 25.763729528236873 24.83289400965678 29 24.29974473318887 25.034068931136183 25.491065661610456 25.175120674064495 30 23.880227013558134 25.363720678893714 26.123707560614047 24.632344746934102 31 25.204445071165715 24.76507807986754 25.195120065138575 24.835356783828168 32 24.4206753348359 25.589627308144546 25.175611165062893 24.81408619195666 33 23.93349277987371 25.334805894002926 26.031209431423584 24.700491894699784 34 24.74252501516967 25.323930413297273 26.05025504146983 23.883289530063234 35 24.884636255669253 25.393851482000528 25.910662862221688 23.81084940010853 36 23.898281646882438 25.654435257898527 25.872504530600658 24.574778564618374 37 24.81070754395142 25.41577020173304 25.079169414814984 24.694352839500556 38 24.39218768763851 25.773843964817665 25.351304781347682 24.482663566196138 39 25.277503467229735 24.870487768377682 25.13276453632369 24.71924422806889 40 25.767233936870987 25.153947132612416 25.572690611067088 23.506128319449513 41 24.699438290408725 25.029349997066134 26.264255956536985 24.006955755988148 42 25.206095064816918 25.99667955424153 25.536820559472368 23.260404821469184 43 24.201888376721968 25.33543294479605 26.03409048524859 24.42858819323339 44 23.94591061487581 25.793435460123206 25.3253909808875 24.935262944113486 45 24.040518443214822 25.9816557160434 25.436239626473444 24.54158621426833 46 24.303949354813327 25.04795290994678 25.432031042828534 25.216066692411367 47 25.07118502831026 25.061678529321863 25.588720652664364 24.278415789703505 48 24.87577871417551 25.60518645473997 24.841482540791525 24.677552290293 49 24.736117693828298 25.540932573670084 25.03481890982926 24.688130822672363 50 24.322051282984315 26.4811983768985 24.711997733006992 24.484752607110188 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 29.0 2 39.0 3 111.5 4 184.0 5 222.5 6 261.0 7 254.5 8 248.0 9 372.0 10 496.0 11 718.0 12 940.0 13 1801.5 14 2663.0 15 3665.5 16 4668.0 17 5022.5 18 5377.0 19 5472.0 20 5567.0 21 6170.0 22 6773.0 23 7949.5 24 9126.0 25 11147.5 26 13169.0 27 18081.0 28 22993.0 29 28298.0 30 33603.0 31 40123.0 32 46643.0 33 56388.0 34 66133.0 35 77073.0 36 88013.0 37 95228.5 38 102444.0 39 104907.0 40 107370.0 41 110886.0 42 114402.0 43 115164.5 44 115927.0 45 126019.5 46 136112.0 47 143696.5 48 151281.0 49 155780.5 50 160280.0 51 157457.5 52 154635.0 53 153126.0 54 151617.0 55 150968.5 56 150320.0 57 145831.0 58 141342.0 59 129024.0 60 116706.0 61 102525.5 62 88345.0 63 76330.0 64 64315.0 65 54440.5 66 44566.0 67 38029.0 68 31492.0 69 27801.0 70 24110.0 71 18534.0 72 12958.0 73 10989.5 74 9021.0 75 7005.5 76 4990.0 77 4335.5 78 3681.0 79 3020.5 80 2360.0 81 1937.5 82 1515.0 83 1223.0 84 931.0 85 668.5 86 406.0 87 299.0 88 192.0 89 147.5 90 103.0 91 82.0 92 61.0 93 49.0 94 37.0 95 45.0 96 53.0 97 39.0 98 25.0 99 21.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00773244291978864 2 4.548495835169789E-4 3 3.183947084618852E-4 4 0.0 5 0.0 6 1.8193983340679154E-4 7 9.096991670339577E-5 8 0.0 9 0.0014100337089026345 10 0.0013645487505509367 11 9.096991670339577E-5 12 1.3645487505509364E-4 13 2.729097501101873E-4 14 1.3645487505509364E-4 15 0.004230101126707904 16 5.458195002203746E-4 17 0.0 18 3.183947084618852E-4 19 4.5484958351697886E-5 20 3.638796668135831E-4 21 0.0 22 9.096991670339577E-5 23 5.913044585720725E-4 24 6.822743752754683E-4 25 0.0013190637921992386 26 0.004957860460335069 27 0.005048830377038465 28 0.0033658869180256436 29 0.002046823125826405 30 0.003183947084618852 31 0.006322409210886007 32 0.0029110373345086647 33 0.004139131210004508 34 0.0028655523761569666 35 0.0021832780008814983 36 0.006595318960996193 37 0.0035933117097841326 38 0.006959198627809776 39 0.004002676334949414 40 0.0021377930425298007 41 0.002820067417805269 42 0.0013190637921992386 43 0.001228093875495843 44 9.096991670339578E-4 45 0.0010916390004407492 46 8.187292503305619E-4 47 0.0015010036256060302 48 0.0015010036256060302 49 5.003345418686767E-4 50 0.0010006690837373535 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2198529.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.94129346047354 #Duplication Level Percentage of deduplicated Percentage of total 1 77.12543411135525 41.60245674667029 2 13.345014460134488 14.396946824567545 3 4.092891505801634 6.623275854489761 4 1.7537591176954692 3.7840014090636984 5 0.9411424760607427 2.5383221244654606 6 0.5724122613790291 1.8525994662851695 7 0.3812425696653483 1.4395302130960508 8 0.28824860800359015 1.2438802203115726 9 0.20700981442449956 1.004973943416309 >10 1.1458924884666486 11.051900316898168 >50 0.0761978635639883 2.8381295833838074 >100 0.060250959312406274 6.84583036035375 >500 0.007877823102700646 2.9064979948979968 >1k 0.0026259410342335168 1.871654942100466 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3645487505509364E-4 2 0.0 0.0 0.0 0.0 1.3645487505509364E-4 3 0.0 0.0 0.0 0.0 1.3645487505509364E-4 4 0.0 0.0 0.0 0.0 1.3645487505509364E-4 5 0.0 4.5484958351697886E-5 0.0 0.0 1.8193983340679154E-4 6 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 7 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 8 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 9 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 10 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 11 0.0 4.5484958351697886E-5 0.0 0.0 3.183947084618852E-4 12 0.0 4.5484958351697886E-5 0.0 0.0 5.913044585720725E-4 13 0.0 4.5484958351697886E-5 0.0 0.0 6.822743752754683E-4 14 0.0 4.5484958351697886E-5 0.0 0.0 6.822743752754683E-4 15 0.0 4.5484958351697886E-5 0.0 0.0 7.73244291978864E-4 16 0.0 9.096991670339577E-5 0.0 0.0 9.096991670339577E-4 17 0.0 9.096991670339577E-5 0.0 0.0 9.551841253856556E-4 18 0.0 9.096991670339577E-5 0.0 4.5484958351697886E-5 9.551841253856556E-4 19 0.0 9.096991670339577E-5 0.0 4.5484958351697886E-5 9.551841253856556E-4 20 0.0 9.096991670339577E-5 0.0 1.3645487505509364E-4 0.0010461540420890513 21 0.0 9.096991670339577E-5 0.0 1.3645487505509364E-4 0.0011371239587924472 22 0.0 9.096991670339577E-5 0.0 1.3645487505509364E-4 0.001228093875495843 23 0.0 9.096991670339577E-5 0.0 2.2742479175848942E-4 0.001228093875495843 24 0.0 9.096991670339577E-5 0.0 3.183947084618852E-4 0.0013190637921992386 25 0.0 9.096991670339577E-5 0.0 4.09364625165281E-4 0.0013190637921992386 26 0.0 9.096991670339577E-5 0.0 5.458195002203746E-4 0.0013645487505509367 27 0.0 9.096991670339577E-5 0.0 7.73244291978864E-4 0.0015010036256060302 28 0.0 9.096991670339577E-5 0.0 0.0018648832924196134 0.0015010036256060302 29 0.0 9.096991670339577E-5 0.0 0.0038207365015426225 0.0015010036256060302 30 0.0 9.096991670339577E-5 0.0 0.0076869579614369426 0.0015010036256060302 31 0.0 9.096991670339577E-5 0.0 0.01955853209123009 0.0015010036256060302 32 0.0 9.096991670339577E-5 0.0 0.03202141067959531 0.0015010036256060302 33 0.0 1.3645487505509364E-4 0.0 0.04471171405971902 0.0015010036256060302 34 0.0 1.3645487505509364E-4 0.0 0.061177268983033654 0.0015919735423094259 35 4.5484958351697886E-5 1.3645487505509364E-4 0.0 0.07882543282349244 0.0015919735423094259 36 4.5484958351697886E-5 1.3645487505509364E-4 0.0 0.10520670866747721 0.0015919735423094259 37 4.5484958351697886E-5 1.3645487505509364E-4 0.0 0.14891775364345888 0.0015919735423094259 38 4.5484958351697886E-5 1.3645487505509364E-4 0.0 0.20918532345945856 0.0017284284173645196 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3775 0.0 21.096558 1 TATACCG 120 1.43318175E-8 20.16654 5 TGTAGGA 2265 0.0 19.42416 2 GTAGGAC 2270 0.0 19.382698 3 TAGGACG 1735 0.0 19.273655 4 GATATAC 915 0.0 19.234854 1 GTCCTAA 1200 0.0 18.699884 1 ATACACT 1000 0.0 18.479885 4 GTCCTAC 2005 0.0 18.214352 1 TAGGACC 2060 0.0 18.155228 4 CTGTAGG 2280 0.0 18.140238 1 TACACCG 125 4.8572656E-7 17.599892 5 TTAGGAC 1150 0.0 17.599491 3 AGGACGT 1930 0.0 17.21233 5 GGACGTG 1905 0.0 17.207243 6 GGTATCA 2060 0.0 16.980478 1 ATTTCGT 1015 0.0 16.905914 42 AACGCAG 4710 0.0 16.721766 6 GATTTCG 990 0.0 16.666563 41 CGAATGT 595 0.0 16.640821 33 >>END_MODULE