##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063919_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2002616 Sequences flagged as poor quality 0 Sequence length 25 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.380410922513352 32.0 32.0 32.0 32.0 32.0 2 31.151646646186787 32.0 32.0 32.0 32.0 32.0 3 31.15530186516037 32.0 32.0 32.0 32.0 32.0 4 31.162179868731698 32.0 32.0 32.0 32.0 32.0 5 31.211356545638306 32.0 32.0 32.0 32.0 32.0 6 34.87810943286182 36.0 36.0 36.0 36.0 36.0 7 34.80104073871376 36.0 36.0 36.0 36.0 36.0 8 34.78771466921267 36.0 36.0 36.0 36.0 36.0 9 34.801628469961294 36.0 36.0 36.0 36.0 36.0 10 34.63529353605484 36.0 36.0 36.0 32.0 36.0 11 34.76985602831496 36.0 36.0 36.0 36.0 36.0 12 34.66520940609683 36.0 36.0 36.0 32.0 36.0 13 34.691861045752155 36.0 36.0 36.0 32.0 36.0 14 34.67797071430569 36.0 36.0 36.0 32.0 36.0 15 34.657784118373165 36.0 36.0 36.0 32.0 36.0 16 34.65135402893016 36.0 36.0 36.0 32.0 36.0 17 34.64215506117998 36.0 36.0 36.0 32.0 36.0 18 34.65164315075881 36.0 36.0 36.0 32.0 36.0 19 34.51682349486871 36.0 36.0 36.0 32.0 36.0 20 34.48485580860235 36.0 36.0 36.0 32.0 36.0 21 34.44960291938145 36.0 36.0 36.0 32.0 36.0 22 34.390855261318194 36.0 36.0 36.0 32.0 36.0 23 34.43537502946146 36.0 36.0 36.0 32.0 36.0 24 34.36596781409916 36.0 36.0 36.0 32.0 36.0 25 34.0867545250812 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 8.0 4 21.0 5 27.0 6 75.0 7 19.0 8 98.0 9 136.0 10 196.0 11 47.0 12 137.0 13 134.0 14 182.0 15 316.0 16 541.0 17 650.0 18 835.0 19 969.0 20 1431.0 21 2022.0 22 3077.0 23 4629.0 24 6877.0 25 10255.0 26 15145.0 27 20757.0 28 29077.0 29 40350.0 30 54531.0 31 76334.0 32 110053.0 33 163098.0 34 394264.0 35 1066324.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.527777985925546 20.074553535523084 12.52083767321433 25.876830805337043 2 9.62903777537522 20.256280290337802 53.02644950424346 17.088232430043522 3 19.878376772340452 26.31113494705325 30.504729403798503 23.305758876807793 4 9.59126704718531 17.57581659201111 41.652659385876866 31.180256974926717 5 8.684246403974392 42.510483570121934 38.533343920528125 10.271926105375547 6 28.54979666219355 41.25732333233284 19.315218797272983 10.877661208200633 7 25.369717826220512 32.14034018685054 22.86399268780577 19.625949299123185 8 19.64860084230697 48.99162438564092 19.57297204681792 11.786802725234192 9 27.057194829928306 14.137411277095238 21.068676661685647 37.73671723129081 10 14.918516712368191 30.243450558411343 37.24137999952033 17.59665272970013 11 33.71586883640524 19.047500087435733 31.705096753885893 15.53153432227313 12 27.23838590673948 22.479921770731682 36.93934483487458 13.342347487654257 13 32.45995154060211 24.24803736440438 26.093172161779837 17.198838933213676 14 16.56969902302788 28.366321320938663 27.64249946156848 27.421480194464976 15 17.68491541506005 45.20888535351693 21.857675851582997 15.248523379840018 16 15.165473464131718 27.575446095511836 40.276694398402554 16.98238604195389 17 15.775855995227023 33.55694167744734 33.707046585987776 16.96015574133786 18 15.827504231585543 27.334918189346148 43.17646523803075 13.66111234103756 19 24.634758087044386 24.241568639993282 27.705513697415036 23.418159575547296 20 23.699242574168363 30.57824434729244 31.622678396871944 14.099834681667256 21 19.534150844013645 27.078450441121937 26.767910990018162 26.619487724846252 22 21.924779324933947 36.067223749499625 27.587943942561267 14.420052983005158 23 17.072395480892347 34.92657899392581 31.805174204343388 16.195851320838454 24 24.221592317471995 27.452763807041254 33.601414886897004 14.724228988589752 25 19.475702410943324 32.00583108154369 33.65555539452504 14.86291111298795 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 201.0 1 201.0 2 532.5 3 864.0 4 864.0 5 864.0 6 2686.0 7 4508.0 8 4508.0 9 4508.0 10 4589.0 11 4670.0 12 4670.0 13 4670.0 14 5649.5 15 6629.0 16 6629.0 17 6629.0 18 13723.5 19 20818.0 20 20818.0 21 20818.0 22 43215.0 23 65612.0 24 65612.0 25 65612.0 26 117948.0 27 170284.0 28 170284.0 29 170284.0 30 243692.5 31 317101.0 32 317101.0 33 317101.0 34 319656.5 35 322212.0 36 322212.0 37 322212.0 38 308411.0 39 294610.0 40 294610.0 41 294610.0 42 279492.5 43 264375.0 44 264375.0 45 264375.0 46 255164.5 47 245954.0 48 245954.0 49 245954.0 50 204066.5 51 162179.0 52 162179.0 53 162179.0 54 111634.0 55 61089.0 56 61089.0 57 61089.0 58 45706.5 59 30324.0 60 30324.0 61 30324.0 62 23072.0 63 15820.0 64 15820.0 65 15820.0 66 11996.5 67 8173.0 68 8173.0 69 8173.0 70 5806.0 71 3439.0 72 3439.0 73 3439.0 74 2635.5 75 1832.0 76 1832.0 77 1832.0 78 1258.0 79 684.0 80 684.0 81 684.0 82 456.0 83 228.0 84 228.0 85 228.0 86 169.5 87 111.0 88 111.0 89 111.0 90 92.0 91 73.0 92 73.0 93 73.0 94 66.0 95 59.0 96 59.0 97 59.0 98 413.0 99 767.0 100 767.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.041595592964402565 2 0.006042096937206134 3 0.0018975180463953148 4 0.004294382947105187 5 0.009837133029996765 6 0.01413151597710195 7 0.02401858369253017 8 0.036602124421256994 9 0.050883444454653315 10 0.06112005496810172 11 0.05722514950444818 12 0.06586385008409001 13 0.0675616293887595 14 0.07155640422327596 15 0.06266803021647685 16 0.07085731862723557 17 0.06736189064703368 18 0.07954595389230887 19 0.07714908899159899 20 0.08129366788240981 21 0.07899667235256284 22 0.07974569263403469 23 0.08438961837916005 24 0.0802949741737807 25 0.08064451697180089 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2002616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.283733926678014 #Duplication Level Percentage of deduplicated Percentage of total 1 70.45554550147324 20.632014481240983 2 15.110242150122152 8.849686213837044 3 5.49273333424364 4.8254322447055715 4 2.6424775156214717 3.095264338987533 5 1.4567042562941568 2.132886992558873 6 0.9121636032097171 1.6026933752395955 7 0.6115268386124236 1.2535452461664145 8 0.42664578601217185 0.9995025342815075 9 0.34267782757445847 0.903139769273624 >10 2.06740456379559 11.703685301873781 >50 0.240975102170568 4.88980825520444 >100 0.19371451876645626 11.597803892595179 >500 0.023936450342624788 4.801097662348866 >1k 0.020004033500622145 12.062274722765471 >5k 0.0020516957436535537 4.155924504243629 >10k+ 0.0011968225171312395 6.495240464677512 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 24611 1.2289425431535552 No Hit GTCCTACAGTGGACATTTCTAAATT 23416 1.1692705940629657 No Hit CTGTAGGACGTGGAATATGGCAAGA 22757 1.1363636363636365 No Hit CTTTAGGACGTGAAATATGGCGAGG 20286 1.0129750286625094 No Hit GTCCTACAGTGTGCATTTCTCATTT 16348 0.8163322374334372 No Hit CTGTAGGACCTGGAATATGGCGAGA 11641 0.5812896731075753 No Hit CTGAAGGACCTGGAATATGGCGAGA 10670 0.5328030935536319 No Hit ATTTAGAAATGTCCACTGTAGGACG 9750 0.4868631829566926 No Hit GTCCTTCAGTGTGCATTTCTCATTT 9247 0.46174603618467047 No Hit GATATACACTGTTCTACAAATCCCG 8187 0.40881526962732745 No Hit TTGTAGAACAGTGTATATCAATGAG 7723 0.38564557558713203 No Hit TTTCTAAATTTTCCACCTTTTTCAG 7399 0.36946673750734044 No Hit GAATATGGCAAGAAAACTGAAAATC 6555 0.3273218630031918 No Hit GTGTATATCAATGAGTTACAATGAA 6321 0.3156371466122312 No Hit GTATCAACGCAGAGTACTTTTTTTT 5999 0.29955817790330247 No Hit CTGTAGGACATGGAATATGGCAAGA 5779 0.28857254710838226 No Hit GGAATATGGCGAGAAAACTGAAAAT 5561 0.27768678568432487 No Hit GTGTATATCAATGAGTTACAATGAG 5396 0.26944756258813474 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 5089 0.25411761416067785 No Hit GTTCTACAGTGTGGTTTTTATCATT 4835 0.2414342040610881 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 4774 0.2383881882497693 No Hit GATATACACTGTTCTACAATGCCGG 4760 0.23768910265372892 No Hit CCATATTCCAGGTCCTTCAGTGTGC 4680 0.23369432781921248 No Hit GCCATATTCCACGTCCTACAGTGGA 4501 0.2247560191269819 No Hit GACCTGGAATATGGCGAGAAAACTG 4391 0.2192632037295218 No Hit GAAATATGGCGAGGAAAACTGAAAA 4339 0.2166666000870861 No Hit ACCTGGAATATGGCGAGAAAACTGA 4333 0.21636699197449738 No Hit TATCAACGCAGAGTACTTTTTTTTT 4320 0.21571784106388844 No Hit ACAGTGGACATTTCTAAATTTTCCA 4275 0.21347078021947294 No Hit GTCCACTGTAGGACGTGGAATATGG 4202 0.20982554818297663 No Hit CCATATTTCACGTCCTAAAGTGTGT 4022 0.20083730480531464 No Hit ATACACACTTTAGGACGTGAAATAT 3835 0.19149951862963244 No Hit GTTCTACAAATCCCGTTTCCAACGA 3717 0.18560722574872068 No Hit CTGTAGAACATATTAGATGAGTGAG 3601 0.17981480223867183 No Hit CCACTGTAGGACGTGGAATATGGCA 3558 0.17766761076511922 No Hit CCTAAAGTGTGTATTTCTCATTTTC 3504 0.1749711377518206 No Hit CACTTTAGGACGTGAAATATGGCGA 3459 0.1727240769074051 No Hit GAAATACACACTTTAGGACGTGAAA 3273 0.16343622541715438 No Hit GTGTATTTCTCATTTTCCGTGATTT 3272 0.1633862907317229 No Hit CTACAGTGGACATTTCTAAATTTTC 3123 0.155946022602436 No Hit ATGTTCTACAGTGTGGTTTTTATCA 3103 0.1549473288938069 No Hit AGTGTGTATTTCTCATTTTCCGTGA 3061 0.15285007210568577 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2994 0.14950444818177824 No Hit TCCTAAAGTGTGTATTTCTCATTTT 2868 0.14321267781741484 No Hit GTCCTACAGTGGACATTTCTAAATA 2839 0.1417645719399026 No Hit ATTCCACGTCCTACAGTGGACATTT 2784 0.13901816424117255 No Hit GTAGGACGTGGAATATGGCAAGAAA 2709 0.13527306283381338 No Hit GTAGAACATATTAGATGAGTGAGTT 2670 0.1333256101019866 No Hit ATATTTCACGTCCTAAAGTGTGTAT 2427 0.12119148154214289 No Hit GTAGAACAGTGTATATCAATGAGTT 2427 0.12119148154214289 No Hit TTTCTAAATATTCCACCTTTTTCAG 2357 0.11769605356194099 No Hit GTATCAACGCAGAGTACATGGGAAA 2305 0.1150994499195053 No Hit GTGCATTTCTCATTTTTCACGTTTT 2201 0.10990624263463389 No Hit GGTCCTTCAGTGTGCATTTCTCATT 2195 0.10960663452204515 No Hit GTACATGGGGTGGTATCAACGCAAA 2189 0.10930702640945644 No Hit CATCTAATATGTTCTACAGTGTGGT 2156 0.1076591817902184 No Hit GGTATCAACGCAGAGTACTTTTTTT 2155 0.10760924710478693 No Hit GTATTTCTCATTTTCCGTGATTTTC 2148 0.10725970430676675 No Hit TTTTTCAAGTCGTCAAGTGGATGTT 2116 0.10566179437296018 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2106 0.1051624475186456 No Hit TATTAGATGAGTGAGTTACACTGAA 2090 0.10436349255174232 No Hit ACGTGGAATATGGCAAGAAAACTGA 2065 0.10311512541595594 No Hit CACTGAAGGACCTGGAATATGGCGA 2047 0.10221630107818973 No Hit TTGATATACACTGTTCTACAAATCC 2043 0.10201656233646389 No Hit GTTCTACAATGCCGGTTTCCAACGT 2030 0.101367411425855 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2019 0.10081812988610897 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGCGGG 80 7.697963E-9 15.440668 18 CCAACGA 840 0.0 15.158252 19 TAGGACC 3880 0.0 14.760197 4 CTAATAG 85 1.7264028E-8 14.523682 3 TCCAACG 1150 0.0 14.376863 18 TGGCGAC 80 1.2858072E-7 14.252925 18 CCGGTGT 60 2.5652302E-5 14.2522135 13 GCGTATT 40 0.00527612 14.2515 11 TGCGTAT 40 0.0052778698 14.250788 10 AAATGTC 2640 0.0 13.889183 7 GTCCTAT 555 0.0 13.862514 1 GGCGACA 55 1.9567706E-4 13.821363 19 CCACCTT 2000 0.0 13.777139 13 TAGAAAT 2755 0.0 13.720438 4 AGTGCGC 70 7.26277E-6 13.571839 8 GTGTTAA 70 7.277782E-6 13.569127 1 ATAGGAC 595 0.0 13.566075 3 GAAATGT 2700 0.0 13.544676 6 AATGTCC 2825 0.0 13.451735 8 CTAGGAC 580 0.0 13.262009 3 >>END_MODULE